[Home] [ICTV Taxonomy - Index of Viruses] [Virus Descriptions] [Character List] [Picture Gallery]
[Tutorial] [Online Data Retrieval & Identification] [Virus Isolate Registration & Submission] [Search]
Descriptions are generated automatically from the ICTVdB database including links. Some descriptions are only very basic and links may point to documents that are not yet published on the Web.

81.002.4.03.006. Tobacco ringspot virus satellite RNA

Cite this publication as: ICTVdB Management (2006). 81.002.4.03.006. Tobacco ringspot virus satellite RNA. In: ICTVdB - The Universal Virus Database, version 3. Büchen-Osmond, C. (Ed), Columbia University, New York, USA

Cite this site as: ICTVdB - The Universal Virus Database, version 3. http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/

Table of Contents

Classification

This is a description of a plant satellite at the species level.

ICTVdB Virus Code: 81.002.4.03.006. Virus accession number: 81243006. Obsolete virus code: 81.064.0.54.006.; 64.0.5.4.006; superceded accession number: 64054006.
NCBI Taxonomy Identifier Taxon ID: 31504.

Name, Synonyms and Lineage

Virus is an ICTV approved species of the genus 81.002.4. single stranded Satellite RNAs; family 81. Satellites.

Virion Properties

Nucleic acid is not encapsidated and virus relies for encapsidation on a helper virus.

Nucleic Acid

The genome is circular, single-stranded RNA, is fully sequenced. Sequence has the accession number

[M14879] Em(40)_vi:TRSSATA Gb(84)_vi:TRSSATA Tobacco ringspot virus satellite RNA. 7/89 359bp.
[M31515] Em(40)_vi:TRSSTOBA Gb(84)_vi:TRSSTOBA Tobacco ringspot virus (STobRV) autolytic junction. 12/90 71bp.
[S63883] Em(40)_vi:S63883 Gb(84)_vi:S63883 satellite RNA tobacco ringspot virus satellite RNA sTobRV RNA, D-94, Genomic RNA, 75 nt. 12
[S63888] Em(40)_vi:S63888 Gb(84)_vi:S63888 (D80.2)=satellite RNA tobacco ringspot virus satellite RNA sTobRV RNA, D-94, Genomic RNA Mut
[S63895] Em(40)_vi:S63895 Gb(84)_vi:S63895 (D80.3)=satellite RNA tobacco ringspot virus satellite RNA sTobRV RNA, D-94, Genomic RNA Mut
[S63896] Em(40)_vi:S63896 Gb(84)_vi:S63896 (D80.4)=satellite RNA tobacco ringspot virus satellite RNA sTobRV RNA, D-94, Genomic RNA Mut
[S63897] Em(40)_vi:S63897 Gb(84)_vi:S63897 (D83.2)=satellite RNA tobacco ringspot virus satellite RNA sTobRV RNA, D-94, Genomic RNA Mut
[S63901] Em(40)_vi:S63901 Gb(84)_vi:S63901 satellite RNA tobacco ringspot virus satellite RNA sTobRV RNA, D-16, Genomic RNA, 77 nt. 12
[S63903] Em(40)_vi:S63903 Gb(84)_vi:S63903 (E.8)=satellite RNA tobacco ringspot virus satellite RNA sTobRV RNA, D-16, Genomic RNA Mutan
[S63904] Em(40)_vi:S63904 Gb(84)_vi:S63904 (E.59)=satellite RNA tobacco ringspot virus satellite RNA sTobRV RNA, D-16, Genomic RNA Muta
[S63907] Em(40)_vi:S63907 Gb(84)_vi:S63907 (J63.B1)=satellite RNA tobacco ringspot virus satellite RNA sTobRV RNA, D-16, Genomic RNA Mu
[S63908] Em(40)_vi:S63908 Gb(84)_vi:S63908 (J63.A1)=satellite RNA tobacco ringspot virus satellite RNA sTobRV RNA, D-16, Genomic RNA Mu
[S63910] Em(40)_vi:S63910 Gb(84)_un:S63910 satellite RNA tobacco ringspot virus satellite RNA sTobRV RNA, mutant B-15, Genomic RNA, 55
[S63911] Em(40)_vi:S63911 Gb(84)_un:S63911 (B.5.15)=satellite RNA tobacco ringspot virus satellite RNA sTobRV RNA, mutant B-15.

GenBank records for nucleotide sequences; complete genome sequences.

Translation: Virions are associated with helper virus and dependent on co-infection of helper virus during replication, or are associated with helper virus, but independent from its functions during replication.

Biological Properties

Natural Host

Domain
Viral hosts belong to the Domain Eucarya.

Domain Eucarya
Kingdom Plantae.

Kingdom Plantae
Phylum Magnoliophyta (Angiosperms, Class Magnoliopsida (Dicotyledonae).

References

The following generic references are cited in the most recent ICTV Report.

PubMed References.

VIDEdB, the plant virus database developed at the Australian National University by Adrian J. Gibbs and collaborators, contains an earlier description with the number 810.



Limit search to: Title & Body Title Document Path
Show Reverse Sort

DELTA - DEscription Language for TAxonomy developed by Dr Mike Dallwitz, Toni Paine and Eric Zurcher, CSIRO Entomology, Canberra, Australia. ICTVdB - The Universal Virus Database, developed for the International Committee on Taxonomy of Viruses by Dr Cornelia Büchen-Osmond is written in DELTA. The virus descriptions in ICTVdB are coded by, or using data from experts in the field of virology or members ICTV. The character list is the underlying code. All virus descriptions are based on the character list and natural language translations are automatically generated and formatted for display on the Web from the descriptions in DELTA-format. The description has been generated automatically from DELTA files. DELTA - DEscription Language for TAxonomy developed by Dr Mike Dallwitz, Toni Paine and Eric Zurcher, CSIRO Entomology, Canberra, Australia.

ICTVdB - The Universal Virus Database, developed for the International Committee on Taxonomy of Viruses (ICTV) by Dr Cornelia Büchen-Osmond, is written in DELTA. The virus descriptions in ICTVdB are coded by ICTV members and experts, or by the ICTVdB Management using data provided by the experts, the literature or the latest ICTV Report. The character list is the underlying code. All virus descriptions are based on the character list and natural language translations from the encoded descriptions are automatically generated and formatted for display on the Web.

Developer of the DELTA software: M. J. Dallwitz, T. Paine and E. Zurcher

ICTVdB and DELTA related References

Comments to ICTVdB Management
Last updated on 25 April 2006 by Cornelia Büchen-Osmond
Copyright © 2002    International Committee on Taxonomy of Viruses.    All rights reserved.


Additional access points to virus species lists, descriptions and images on the web:

Species catalogue                     iSpecies.org - a species search engine           a species search engine

Google Analytics      Google Analytics: activity view