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Descriptions are generated automatically from the ICTVdB database including links. Some descriptions are only very basic and links may point to documents that are not yet published on the Web.

03.019.0.01.014.00.044.012. SARS-Coronavirus GD01

Cite this publication as: ICTVdB Management (2006). 03.019.0.01.014.00.044.012. SARS-Coronavirus GD01. In: ICTVdB - The Universal Virus Database, version 4. Büchen-Osmond, C. (Ed), Columbia University, New York, USA

Cite this site as: ICTVdB - The Universal Virus Database, version 4. http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/

Table of Contents

Isolate Description

Isolate designation: GD01.
Isolation date: 03 March 2003.
Location: Guangzhou; Guangdong; China.

Host of Isolate and Habitat Details
Source of isolate: human.
Virus was isolated from autopsied lung tissue.
Virus was isolated from an adult.

Collection and Isolation Details
Virus was isolated by Dr E'de Qin. Institute of Microbiology and Epidemiology; Chinese Academy of Military Medical Sciences; Beijing; 100071; China; email: [mailto] zhuqy@nic.bmi.ac.cn.

Reference to Isolation Report
Qin, E'de, et. al., (2003) A Genome Sequence of Novel SARS-CoV Isolates: the Genotype, GD-Ins29, Leads to a Hypothesis of Viral Transmission in South China. Ge.

Classification

This is a description of a vertebrate virus at the isolate level.

ICTVdB Virus Code: 03.019.0.01.014.00.044.012. Virus accession number: I018SARS. Former accession number: 41180581.
NCBI Taxon Identifier NCBI Taxonomy ID: 233044.

Name, Synonyms and Lineage

Synonym(s): the isolate was previously named GZ01 and is cited in many papers as such. Virus is assigned to species SARS coronavirus of the genus 03.019.0.01. Coronavirus; of the family 03.019. Coronaviridae; of the order 03. Nidovirales .

Virion Properties

Morphology

Virions consist of spikes and a nucleocapsid.

Nucleic Acid

The genome is not segmented and contains a single molecule of linear positive-sense, single-stranded RNA. The complete genome is 29757 nucleotides long. Sequence can be accessed from GenBank; the RNA is fully sequenced, complete sequence is 29757 nucleotides long and encodes replicase, 12 ORFs including 6 coding sequences and 6 postulated uncharacterized proteins. Sequence has the accession number [AY278489]. The 3'-terminus has a poly (A) tract 17 nucleotides in length.

GenBank records for nucleotide sequences; complete genome sequences.

Biological Properties

Natural Host

Domain
Viral hosts belong to the Domain Eucarya.

Domain Eucarya
Kingdom Animalia.

Kingdom Animalia
Phylum Chordata.

Phylum Vertebrata
Subphylum Vertebrata; Class Mammalia.

Class Mammalia Order Primates;
Family Hominidae.
Virus infects Homo sapiens (human).

General Symptoms in Animals General symptoms include death (information regarding specific symptoms is not available).

Comments

The patient from whom GD01 was taken is also the source of GZ02.

References

PubMed References.

Contributor

Data have been submitted online to ICTVdB on 01-12-05 by
Sara Mullins
American Type Culture Collection;
George Mason University;
PW II, 10801 University Boulevard;
Manassas; VA; 20110;
United States of America;
Tel: + 703-365-2700;
Fax: + 703-365-2701;
email: ICTVdB Management. Involved in the isolation of the virus was also Qingyu Zhu; Institute of Microbiology and Epidemiology, Chinese Academy of Military Medical Sciences, Beijing 100071, China; Man Yu; Institute of Microbiology and Epidemiology, Chinese Academy of Military Medical Sciences, Beijing 100071, China; Baochang Fan; Institute.



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DELTA - DEscription Language for TAxonomy developed by Dr Mike Dallwitz, Toni Paine and Eric Zurcher, CSIRO Entomology, Canberra, Australia. ICTVdB - The Universal Virus Database, developed for the International Committee on Taxonomy of Viruses by Dr Cornelia Büchen-Osmond is written in DELTA. The virus descriptions in ICTVdB are coded by, or using data from experts in the field of virology or members ICTV. The character list is the underlying code. All virus descriptions are based on the character list and natural language translations are automatically generated and formatted for display on the Web from the descriptions in DELTA-format. The description has been generated automatically from DELTA files. DELTA - DEscription Language for TAxonomy developed by Dr Mike Dallwitz, Toni Paine and Eric Zurcher, CSIRO Entomology, Canberra, Australia.

ICTVdB - The Universal Virus Database, developed for the International Committee on Taxonomy of Viruses (ICTV) by Dr Cornelia Büchen-Osmond, is written in DELTA. The virus descriptions in ICTVdB are coded by ICTV members and experts, or by the ICTVdB Management using data provided by the experts, the literature or the latest ICTV Report. The character list is the underlying code. All virus descriptions are based on the character list and natural language translations from the encoded descriptions are automatically generated and formatted for display on the Web.

Developer of the DELTA software: M. J. Dallwitz, T. Paine and E. Zurcher

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Last updated on 25 April 2006 by Cornelia Büchen-Osmond
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