[Home] [ICTV Taxonomy - Index of Viruses] [Virus Descriptions] [Character List] [Picture Gallery]
[Tutorial] [Online Data Retrieval & Identification] [Virus Isolate Registration & Submission] [Search]
Descriptions are generated automatically from the ICTVdB database including links. Some descriptions are only very basic and links may point to documents that are not yet published on the Web.

00.073.0.01.012. Highlands J virus

Cite this publication as: ICTVdB Management (2006). 00.073.0.01.012. Highlands J virus . In: ICTVdB - The Universal Virus Database, version 4. Büchen-Osmond, C. (Ed), Columbia University, New York, USA

Cite this site as: ICTVdB - The Universal Virus Database, version 4. http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/

Table of Contents

Biocontainment Level

Distribution of this virus falls under quarantine restrictions. It is recommended to handle this virus at the biocontainment level BSL-3.

Classification

This is a description of an invertebrate or vertebrate virus at the species level with data limited to classification details. If you have primary data on this virus, please submit them to ICTVdB using the online data entry systems or contact the ICTVdB management.

ICTVdB Virus Code: 00.073.0.01.012. Virus accession number: 73001012. Obsolete virus code: 73.0.1.0.012; superceded accession number: 73010012.
NCBI Taxon Identifier NCBI Taxonomy ID: 11024.

Name, Synonyms and Lineage

The taxon has the accepted ICTV name.

ICTV approved acronym: (HJV). Virus is an ICTV approved species. Virus is of the genus 00.073.0.01. Alphavirus in the family 00.073. Togaviridae; not assigned to an order.

Virion Properties

Morphology

Virions consist of an envelope and a nucleocapsid. During their life cycle, virions have not been observed outside a cellular environment and have a cell-associated cycle. Virus capsid is enveloped (with a tight fitting membrane). Virions are spherical and measure about 70 nm in diameter. Surface projections are distinctive glycoprotein spikes covering evenly the surface. Capsid/nucleocapsid is round and exhibits icosahedral symmetry (T=4). The nucleocapsid is isometric and has a diameter of about 40 nm. Capsids appear round.

Nucleic Acid

The genome is not segmented and contains a single molecule of linear positive-sense, single-stranded RNA. The complete genome is about 11500 nucleotides long. Sequence can be accessed from GenBank; the RNA is fully and partially sequenced, sequenced region is 278 nucleotides long. Sequenced genome has the accession number(s)
[J02206]; [U60401]; [U94609]. The 5'-end of the genome has a methylated nucleotide cap. The 3'-terminus has a poly (A) tract.

Reference to nucleotide sequence in PubMed: nucleotide sequences; complete genome sequences.

Proteins

The viral genome encodes structural proteins and non-structural proteins.

Biological Properties

Natural Host

Virus infects during its life cycle arthropod and vertebrate hosts. Domain
Viral hosts belong to the Domain Eucarya.

Domain Eucarya
Kingdom Animalia.

Kingdom Animalia
Phylum Arthropoda and Chordata.

Phylum Arthropoda
Subphylum Hexapoda; Class Insecta; Subclass Pterygota (winged insects), Order Diptera.

Phylum Vertebrata
Subphylum Vertebrata; Class Mammalia.

Class Mammalia Order Primates, Perissodactyla, and Rodentia.

Transmission and Vector Relationships

Virus is transmitted by a vector.

Vector Transmission:
Virus is transmitted by arthropods, insects.

Geographical Distribution

Geographical distribution of the virus is probably restricted. The virus spreads in North America and South and Central Americas. The virus is known to occur in temperate regions, or subtropical regions, or tropical regions; viral host lives in the atmosphere. The viral host is found in a pristine environment with no signs of human interference, or a undisturbed environment yet with signs of human disturbance; an agricultural environment, or an aquatic environment.

References

Ou JH, Trent DW and Strauss JH (1982). The 3'-non-coding regions of alphavirus RNAs contain repeating sequences, J. Mol. Biol. 156, 719-730 Ou JH, Strauss EG and Strauss JH (1983). The 5'-terminal sequences of the genomic RNAs of several alphaviruses, J. Mol. Biol. 168, 1-15.

The following generic references are cited in the most recent ICTV Report.

PubMed References.



Limit search to: Title & Body Title Document Path
Show Reverse Sort

DELTA - DEscription Language for TAxonomy developed by Dr Mike Dallwitz, Toni Paine and Eric Zurcher, CSIRO Entomology, Canberra, Australia. ICTVdB - The Universal Virus Database, developed for the International Committee on Taxonomy of Viruses by Dr Cornelia Büchen-Osmond is written in DELTA. The virus descriptions in ICTVdB are coded by, or using data from experts in the field of virology or members ICTV. The character list is the underlying code. All virus descriptions are based on the character list and natural language translations are automatically generated and formatted for display on the Web from the descriptions in DELTA-format. The description has been generated automatically from DELTA files. DELTA - DEscription Language for TAxonomy developed by Dr Mike Dallwitz, Toni Paine and Eric Zurcher, CSIRO Entomology, Canberra, Australia.

ICTVdB - The Universal Virus Database, developed for the International Committee on Taxonomy of Viruses (ICTV) by Dr Cornelia Büchen-Osmond, is written in DELTA. The virus descriptions in ICTVdB are coded by ICTV members and experts, or by the ICTVdB Management using data provided by the experts, the literature or the latest ICTV Report. The character list is the underlying code. All virus descriptions are based on the character list and natural language translations from the encoded descriptions are automatically generated and formatted for display on the Web.

Developer of the DELTA software: M. J. Dallwitz, T. Paine and E. Zurcher

ICTVdB and DELTA related References

Comments to ICTVdB Management
Last updated on 25 April 2006 by Cornelia Büchen-Osmond
Copyright © 2002    International Committee on Taxonomy of Viruses.    All rights reserved.


Additional access points to virus species lists, descriptions and images on the web:

Species catalogue                     iSpecies.org - a species search engine           a species search engine

Google Analytics      Google Analytics: activity view