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00.011.0.05. Tospovirus


Cite this publication as: ICTVdB Management (2006). 00.011.0.05. Tospovirus. In: ICTVdB - The Universal Virus Database, version 4. Büchen-Osmond, C. (Ed), Columbia University, New York, USA

Cite this site as: ICTVdB - The Universal Virus Database, version 4. http://www.ncbi.nlm.nih.gov/ICTVdb/ICTVdB/


Table of Contents

Classification

This is a description of a plant virus at the genus level with data on all virus properties from morphology to genome, replication, antigenicity and biological properties.

ICTVdB Virus Code: 00.011.0.05. Virus accession number: 011005GE. Obsolete virus code: 11.0.5.; superceded accession number: 11050000.
NCBI Taxon Identifier NCBI Taxonomy ID: 11611.

Name, Synonyms and Lineage

Synonym(s): Tomato spotted wilt virus. Virus is of the family 00.011. Bunyaviridae.

Virion Properties

Morphology

Virions consist of an envelope and a nucleocapsid. Virus capsid is enveloped. Virions are spherical to pleomorphic measuring 70-90 nm in diameter. The envelope surrounds three nucleocapsids. Surface projections are distinctive spikes that are surrounded by a prominent fringe. Surface projections are embedded in a lipid bilayer that is 5 nm thick. Surface projections are 5-10 nm long. Capsid/nucleocapsid is elongated and exhibits helical symmetry. The ribonucleocapsid is filamentous with a length of 200-3000 nm (depending on arrangement) and a width of 2-2.5 nm. Nucleocapsids are circular.

Electron microscopic preparation and references: Virus preparation contains few virions.

Physicochemical and Physical Properties

The thermal inactivation point (TIP) is at 40-43.75-45°C. The longevity in vitro (LIV) is 0.2-0.6-1 days. Although the titer is dependent on the host, the decimal exponent (DEX) of the dilution end point is usually around 2-3. The infectivity is decreased by treatment with ether; lost when deproteinized with proteases; lost when deproteinized with phenol or detergent.

Nucleic Acid

The Mr of the genome constitutes 5% of the virion by weight. The genome is segmented and consists of three segments of circular, negative-sense and ambisense (RNA-L), or ambisense (RNA-S and RNA-M), single-stranded RNA that forms a non-covalently closed circle. Minor species of non-genomic nucleic acid are not found in virions. The complete genome is 17200-17400-17600 nucleotides long. The RNA-L is sequenced, but only an estimate is available, complete sequence is 8800-8848-8897 nucleotides long. RNA-M is sequenced, complete sequence is about 5400 nucleotides long. RNA-S is sequenced, but only an estimate is given, complete sequence is 2916-3208-3500 nucleotides long. The genome has a base ratio of 16.2 % guanine; 31.6 % adenine; 19.3 % cytosine; 32.9 % uracil. The genome has terminally redundant sequences. The terminally redundant sequences have reiterated terminal sequences. The genome sequence is repeated at both ends. Terminal nucleotides are base-paired, forming non-covalently closed, circular RNAs. Nucleotide sequences at the 3'-terminus are complementary to the 5' end and form a panhandle. The 5'-terminal sequence has conserved regions and repeats complementary to the 3'-terminus; terminal repeats at the 5'-end are 8 nucleotides long; at the 5'-end AGAGCAAU... The 3'-terminus has conserved nucleotide sequences; of 8 nucleotides in length; at the 3' end UCUCGUUA.... The genome has no intergenic poly (A) region. The multipartite genome is found in one type of particle only.

GenBank records for nucleotide sequences; complete genome sequences.

Proteins

Proteins constitute about 70% of the particle weight.

The viral genome encodes structural proteins and non-structural proteins. Virions consist of 4 structural protein(s).

Lipids

Lipids are present and located in the envelope. Virions are composed of 20% lipids by weight. The composition of viral lipids and host cell membranes are similar. The lipids are of host origin and are derived from plasma membranes. Viral membranes include phospholipids, sterols, fatty acids, and glycolipids.

Genome Organization and Replication

By itself, genomic nucleic acid is not infectious, or infectious.

Transcription: Sub-genomic RNA is present in infected cells.

Translation: The genome replicates in the cytoplasm.

Release: The outer envelope lipids are derived from cellular Golgi membranes, or cell surface membranes (occasionally).

Biological Properties

Natural Host

Domain
Viral hosts belong to the Domain Eucarya.

Domain Eucarya
Kingdom Plantae.

Kingdom Plantae
Phylum Magnoliophyta (Angiosperms, Class Magnoliopsida (Dicotyledonae).

Class Magnoliopsida (Dicotyledonae)
Subclass ASTERIDAE; Order Scrophulariales.

General Symptoms in Plants Symptoms are expressed in the leaf and inflorescence; include deformation, or wilting, or necrosis, or chlorosis; include deformation of leaves; include necrosis of the leaf. Symptoms in leaves include development of patterns or markings that are visible in the intercostal regions. Intercostal regions show necrosis, chlorosis, and lesions. Leaf veins are chlorotic and include vein clearing. Leaves with mosaic, mottle, streaks, striations, or ringspot have yellow netting. Part of inflorescence effected flower undergoes color change and color breaking.

Severity and Occurrence of Disease

Host: Signs and symptoms persist.

Transmission and Vector Relationships

Virus is transmitted by a vector. Virus is transmitted by mechanical inoculation; transmitted by grafting; not transmitted by contact between hosts; not transmitted by seeds; not transmitted by pollen.

Vector Transmission:
Virus is transmitted by arthropods, by insects of the order Thysanoptera. Virus is transmitted in a semi-persistent manner, or in a persistent manner; retained when the vector moults; replicates in the vector; not transmitted congenitally to the progeny of the vector.

Experimental Hosts and Symptoms

Under experimental conditions susceptibility to infection by virus is found in many families, several families. Susceptible host species are found in the Family Amaranthaceae, Amaryllidaceae, Apocynaceae, Balsaminaceae, Bromeliaceae, Caryophyllaceae, Chenopodiaceae, Compositae, Convolvulaceae, Cruciferae, Cucurbitaceae, Iridaceae, Leguminosae-Caesalpinioideae, Leguminosae-Papilionoideae, Malvaceae, Papaveraceae, Polemoniaceae, Solanaceae, Tropaeolaceae. The following species were susceptible to experimental virus infection: Amaranthus caudatus, Amaranthus retroflexus, Ananas comosus, Arachis hypogaea, Belamcanda chinensis, Bidens pilosa, Brassica oleracea var. botrytis, Calendula officinalis, Canavalia gladiata, Canavalia obtusifolia, Canavalia occidentalis, Capsella bursa-pastoris, Capsicum annuum, Cassia occidentalis, Cassia tora, Catharanthus roseus, Cheiranthus cheiri, Chenopodium amaranticolor, Chenopodium quinoa, Cichorium endiva, Crotalaria juncea, Cucumis sativus, Dahlia pinnata, Datura stramonium, Desmodium triflorum, Glycine max, Gomphrena globosa, Helianthus annuus, Hippeastrum hybridum, Hyoscyamus niger, Impatiens, Ipomoea congesta, Lactuca sativa, Lathyrus odoratus, Lupinus mutabilis, Lycopersicon esculentum, Lycopersicon pimpinellifolium, Malva parviflora, Matthiola incana, Nicandra physalodes, Nicotiana benthamiana, Nicotiana bigelovii, Nicotiana clevelandii, Nicotiana glutinosa, Nicotiana rustica, Nicotiana sylvestris, Nicotiana tabacum, Papaver nudicaule, Petunia x hybrida, Phaseolus vulgaris, Phlox drummondii, Physalis peruviana, Pisum sativum, Solanum capsicastrum, Solanum melongena, Solanum nigrum, Solanum nodiflorum, Solanum tuberosum, Sonchus oleraceus, Spinacia oleracea, Stellaria media, Tephrosia purpurea, Trifolium subterraneum, Tropaeolum majus, Vicia faba, Vigna mungo, Vigna radiata, Vigna unguiculata, Zinnia elegans.

Experimentally infected insusceptible Hosts: Families containing insusceptible hosts: Solanaceae, Umbelliferae. Species inoculated with virus that do not show signs of susceptibility: Apium graveolens, Coriandrum sativum, Lycopersicon esculentum, Nicandra physalodes, Nicotiana debneyi, Nicotiana glutinosa, Nicotiana rustica.

Histopathology: Virions are found in the cytoplasm.

Cytopathology: Inclusions are present in infected cells, or not present in infected cells. Inclusion bodies in the host cell are found in the cytoplasm.

Geographical Distribution

The virus is probably distributed worldwide. The virus occurs in Afghanistan, or Algeria, or Argentina, or Australia, or Austria, or Belgium, or Bolivia, or Brazil, or Bulgaria, or Canada, or Chile, or China, or Cote d'Ivoire, or Cyprus, or Czechoslovakia (former), or Egypt, or France, or Germany, or Greece, or Guyana, or Haiti, or India, or Ireland, or Israel, or Italy, or Jamaica, or Japan, or Libya, or Madagascar, or Malaysia, or Malta, or Mauritius, or Mexico, or Nepal, or the Netherlands, or New Zealand (Aotearoa), or Niger, or Nigeria, or Pakistan, or Papua New Guinea, or Paraguay, or Poland, or Portugal, or Puerto Rico, or Reunion, or Romania, or Senegal, or South Africa, or Spain, or Sri Lanka, or Suriname, or Sweden, or Switzerland, or Taiwan, or Tanzania, or Thailand, or Turkey, or the United Kingdom, or the United States of America, or the USSR (former), or Uganda, or Uruguay, or Yugoslavia, or Congo, Democratic Republic (Zaire), or Zimbabwe.

Taxonomic Structure of the Genus

Type species 00.011.0.05.001. Tomato spotted wilt virus .

Species in the Genus

List of Species in the Genus.

Data Sources and Contributions

The description has been compiled from data in the ICTV Report presented by Schmaljohn CS, Beaty BJ, Calisher CH, the late Dalrymple JM, Elliott RM, Karabatsos N, Kolakofsky D, Lee HW, Lvov DK, Marriott AC, Nuttall PA, Peters D, Pettersson RF, Shope RE.

References

The following generic references are cited in the most recent ICTV Report.

PubMed References.
A description of the virus is found in DPV, a database for plant viruses developed by the Association of Applied Biologists (AAB), with the number 363.

Images

Taxon images: • EM from IACR Rothamsted.




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descriptions in DELTA-format. The description has been generated automatically from DELTA files. DELTA - DEscription
Language for TAxonomy developed by Dr Mike Dallwitz, Toni Paine and Eric
Zurcher, CSIRO Entomology, Canberra, Australia.

ICTVdB - The Universal Virus Database, developed for the International Committee on Taxonomy of Viruses (ICTV) by Dr Cornelia Büchen-Osmond, is written in DELTA. The virus descriptions in ICTVdB are coded by ICTV members and experts, or by the ICTVdB Management using data provided by the experts, the literature or the latest ICTV Report. The character list is the underlying code. All virus descriptions are based on the character list and natural language translations from the encoded descriptions are automatically generated and formatted for display on the Web.

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Last updated on 25 April 2006 by Cornelia Büchen-Osmond
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