c-di-GMP phosphodiesterase class II (HD-GYP) domains in Actinobacteria

Actinobacteria
. Acidothermus cellulolyticus 11B ........................   1 hit
. Frankia alni ACN14a ....................................   1 hit
. Mycobacterium avium subsp. paratuberculosis str. k10 ...   1 hit
. Mycobacterium sp. KMS ..................................   1 hit
. Mycobacterium sp. MCS ..................................   1 hit
. Mycobacterium vanbaalenii PYR-1 ........................   1 hit
. Nocardioides sp. JS614 .................................   2 hits
. Rhodococcus sp. RHA1 ...................................   1 hit
. Rubrobacter xylanophilus DSM 9941 ......................   3 hits
. Streptomyces avermitilis MA-4680 .......................   1 hit*
. Streptomyces coelicolor A3(2) ..........................   1 hit

Actinobacteria
  Acidothermus cellulolyticus 11B
Acel_0546  gi|117927754|ref|YP_872305.1| metal dependent phosphohydro...    BLink   CDD   UniProt   Pfam

  Frankia alni ACN14a
FRAAL6432  gi|111225771|ref|YP_716565.1| Hypothetical protein; putati...    BLink   CDD   UniProt   Pfam

  Mycobacterium avium subsp. paratuberculosis str. k10
MAP3352c   gi|41409450|ref|NP_962286.1| hypothetical protein MAP3352c...    BLink   CDD   UniProt   Pfam

  Mycobacterium sp. KMS
Mkms_0925  gi|119866977|ref|YP_936929.1| transcriptional regulator, L...    BLink   CDD   UniProt   Pfam

  Mycobacterium sp. MCS
Mmcs_0908  gi|108797883|ref|YP_638080.1| transcriptional regulator, L...    BLink   CDD   UniProt   Pfam

  Mycobacterium vanbaalenii PYR-1
Mvan_2058  gi|120403052|ref|YP_952881.1| metal dependent phosphohydro...    BLink   CDD   UniProt   Pfam

  Nocardioides sp. JS614
Noca_3310  gi|119717534|ref|YP_924499.1| regulatory protein, LuxR [No...    BLink   CDD   UniProt   Pfam
Noca_4918  gi|119714219|ref|YP_919361.1| metal-dependent phosphohydro...    BLink   CDD   UniProt   Pfam

  Rhodococcus sp. RHA1
RHA1_ro06927 gi|111023879|ref|YP_706851.1| hypothetical protein RHA1_ro...    BLink   CDD   UniProt   Pfam

  Rubrobacter xylanophilus DSM 9941
Rxyl_1018  gi|108803859|ref|YP_643796.1| metal dependent phosphohydro...    BLink   CDD   UniProt   Pfam
Rxyl_0861  gi|108803703|ref|YP_643640.1| metal dependent phosphohydro...    BLink   CDD   UniProt   Pfam
Rxyl_1017  gi|108803858|ref|YP_643795.1| metal dependent phosphohydro...    BLink   CDD   UniProt   Pfam

  Streptomyces avermitilis MA-4680
SAV3036    gi|29829578|ref|NP_824212.1| putative integral membrane pr...    BLink   CDD   UniProt   Pfam
*SAV3035   gi|29829577|ref|NP_824211.1| lipoprotein [Streptomyces ave...    BLink   CDD   UniProt   Pfam

  Streptomyces coelicolor A3(2)
SCO5218    gi|21223586|ref|NP_629365.1| putative integral membrane pr...    BLink   CDD   UniProt   Pfam
Please send your corrections, questions and comments to Michael Galperin