PubChem Essentials
Course Main
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Essentials Exercises
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Finding 3D structural complexes:
Gleevec |
Goals
- Find compound records for gleevec that are linked to 3D structures
- View the structural complex in Cn3D
Steps
- Search PubChem Compound
- On the NCBI home page, choose PubChem Compound from the Database menu.
- Type gleevec in the search box.
- Click Go.
- Limit to records with links to 3D structures
- Click the Protein3D tab above the record summaries.
- Click on the small pushpin symbol to reveal the Entrez query that accomplishes this limit.
- Click on Other Links to the right, then on Protein
Structures.
- View the structure in Cn3D
- Click the PDB accession 1XBB.
- You should see an image of gleevec in the bottom of the structure summary page.
- Click the View 3D Structure button to launch Cn3D.
Revised October 9, 2007
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