Further Information and References

Special ExPASY features: List of on-line experts. Amos' WWW links - The ExPASy list of Biomolecular servers. Search engines: WORLD-2DPAGE - Links to 2-D PAGE database servers and 2-D PAGE related servers and services. 2D Hunt - 2-D electrophoresis finder. BioHunt - Search the internet for molecular biology information. NCBI's Proteome Analysis tools: Search the Conserved Domain Database using RPS-BLAST [CDD] Search by domain architecture [CDART] COGs - Phylogenetic classification of proteins encoded in complete genomes Search the Entrez Protein [Protein Sequences] Entrez Genome [Complete Genomes] TaxPlot - 3-Way comparison of Proteomes Other Proteomics Websites: Protein - Functional Analysis - from EBI Protein - Structural Analysis - from EBI Protein Information Resources References: Bairoch A, Apweiler R. (2000) The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000. Nucleic Acids Res. 28(1):45-8. Bairoch A. (2000) The ENZYME database in 2000.Nucleic Acids Res. 28(1):304-5. Falquet L, Pagni M, Bucher P, Hulo N, Sigrist CJ, Hofmann K, Bairoch A.(2002) The PROSITE database, its status in 2002. Nucleic Acids Res. 30(1):235-8. Gasteiger E, Gattiker A, Hoogland C, Ivanyi I, Appel RD, Bairoch A (2003) ExPASy: the proteomics server for in-depth protein knowledge and analysis Nucleic Acids Res. 31:3784-3788. Hoogland C, Sanchez JC, Tonella L, Binz PA, Bairoch A, Hochstrasser DF, Appel RD. (2000) The 1999 SWISS-2DPAGE database update. Nucleic Acids Res. 28(1):286-8. Martin L. Yarmush, Arul Jayaraman (2002) Advances in proteomic technologies. Annual Review of Biomedical Engineering 4: 349-373. Monigatti F, Gasteiger E, Bairoch A, Jung E. (2002) The Sulfinator: predicting tyrosine sulfation sites in protein sequences. Bioinformatics 18(5):769-70. Cooper CA, Gasteiger E, Packer NH. (2001) GlycoMod--a software tool for determining glycosylation compositions from mass spectrometric data. Proteomics 1(2):340-9.