y a o g gggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggggg 1 5 5 5 |||-----||-------------------------------------------------------- 12 [C] COG1029 Formylmethanofuran dehydrogenase subunit B 1 5 5 5 |||-----||-------------------------------------------------------- 8 [C] COG1036 Archaeal flavoproteins 2 5 5 5 ||------||---------|---------------------------------------------- 7 [R] COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold 1 5 5 5 |||-----||-------------------------------------------------------- 6 [R] COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes 1 5 5 5 |||-----||-------------------------------------------------------- 10 [C] COG1152 CO dehydrogenase/acetyl-CoA synthase alpha subunit 1 5 5 5 |||-----||-------------------------------------------------------- 9 [C] COG1153 Formylmethanofuran dehydrogenase subunit D 1 5 5 5 |||-----||-------------------------------------------------------- 5 [R] COG1223 Predicted ATPase (AAA+ superfamily) 1 5 5 5 |||-----||-------------------------------------------------------- 7 [C] COG1229 Formylmethanofuran dehydrogenase subunit A 1 4 4 5 ||-|--||---------------------------------------------------------- 5 [S] COG1356 Uncharacterized protein conserved in archaea 1 4 4 5 ||----||-|-------------------------------------------------------- 5 [R] COG1365 Predicted ATPase (PP-loop superfamily) 1 5 5 5 |||-----||-------------------------------------------------------- 5 [R] COG1411 Uncharacterized protein related to proFAR isomerase (HisA) 1 5 5 5 |||-----||-------------------------------------------------------- 6 [C] COG1456 CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein) 2 4 4 5 --|---|||----------------------------|---------------------------- 6 [S] COG1470 Predicted membrane protein 1 5 5 5 |||-----||-------------------------------------------------------- 5 [KG] COG1548 Predicted transcriptional regulator/sugar kinase 2 4 4 5 -|----|||-------|------------------------------------------------- 6 [R] COG1568 Predicted methyltransferases 1 5 5 5 |||-----||-------------------------------------------------------- 7 [C] COG1614 CO dehydrogenase/acetyl-CoA synthase beta subunit 1 4 4 5 ||----||-|-------------------------------------------------------- 5 [S] COG1627 Uncharacterized protein conserved in archaea 3 4 5 5 -----------------|------|-----------------------||--------|------- 10 [T] COG1639 Predicted signal transduction protein 1 5 5 5 |||-----||-------------------------------------------------------- 6 [S] COG1693 Uncharacterized protein conserved in archaea 2 5 5 5 |||-----|--------|------------------------------------------------ 5 [S] COG1751 Uncharacterized conserved protein 1 4 4 5 -||---|||--------------------------------------------------------- 8 [S] COG1753 Uncharacterized conserved protein 3 3 4 5 -------------------------|------|--||-------------|--------------- 7 [R] COG1783 Phage terminase large subunit 3 5 5 5 ||-------|----------------|---------|----------------------------- 5 [S] COG1809 Uncharacterized conserved protein 1 5 5 5 |||-----||-------------------------------------------------------- 12 [S] COG1810 Uncharacterized protein conserved in archaea 1 5 5 5 |||-----||-------------------------------------------------------- 5 [R] COG1821 Predicted ATP-utilizing enzyme (ATP-grasp superfamily) 4 4 4 5 ------||---|----||------------------------------------------------ 5 [S] COG1856 Uncharacterized homolog of biotin synthetase 1 5 5 5 |||-----||-------------------------------------------------------- 7 [C] COG1880 CO dehydrogenase/acetyl-CoA synthase epsilon subunit 1 5 5 5 |||-----||-------------------------------------------------------- 5 [S] COG1891 Uncharacterized protein conserved in archaea 2 5 5 5 -||---|-|--------|------------------------------------------------ 6 [S] COG1895 Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN 3 4 4 5 ------|||-|------|------------------------------------------------ 5 [S] COG1906 Uncharacterized conserved protein 1 5 5 5 |||-----||-------------------------------------------------------- 9 [C] COG1908 Coenzyme F420-reducing hydrogenase, delta subunit 1 5 5 5 |||-----||-------------------------------------------------------- 5 [C] COG1927 Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase 1 5 5 5 |||-----||-------------------------------------------------------- 6 [H] COG1962 Tetrahydromethanopterin S-methyltransferase, subunit H 1 4 4 5 ||----||-|-------------------------------------------------------- 9 [S] COG1991 Uncharacterized conserved protein 1 4 4 5 |||---||---------------------------------------------------------- 5 [S] COG2014 Uncharacterized conserved protein 1 5 5 5 |||-----||-------------------------------------------------------- 5 [J] COG2024 Phenylalanyl-tRNA synthetase alpha subunit (archaeal type) 1 5 5 5 |||-----||-------------------------------------------------------- 8 [C] COG2037 Formylmethanofuran:tetrahydromethanopterin formyltransferase 1 5 5 5 |||-----||-------------------------------------------------------- 14 [S] COG2043 Uncharacterized protein conserved in archaea 1 5 5 5 |||-----||-------------------------------------------------------- 5 [R] COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases 1 5 5 5 |||-----||-------------------------------------------------------- 5 [E] COG2061 ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase 1 5 5 5 |||-----||-------------------------------------------------------- 6 [C] COG2069 CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) 2 5 5 5 |||------|--------|----------------------------------------------- 8 [R] COG2144 Selenophosphate synthetase-related proteins 1 5 5 5 |||-----||-------------------------------------------------------- 10 [C] COG2218 Formylmethanofuran dehydrogenase subunit C 1 5 5 5 |||-----||-------------------------------------------------------- 5 [R] COG2232 Predicted ATP-dependent carboligase related to biotin carboxylase 2 3 3 5 ---|--||-------------------||------------------------------------- 9 [S] COG2253 Uncharacterized conserved protein 3 5 5 5 |--|--------------||-|-------------------------------------------- 5 [S] COG2324 Predicted membrane protein 3 4 4 5 -----------------|---|--------|-----||---------------------------- 8 [S] COG2359 Uncharacterized protein conserved in bacteria 3 4 4 5 -|----||----|--------|-------------------------------------------- 5 [S] COG2383 Uncharacterized conserved protein 4 5 5 5 --|-------------|-||-|-------------------------------------------- 5 [R] COG2389 Uncharacterized metal-binding protein 3 4 4 5 ------|||---|------------------------|---------------------------- 5 [S] COG2426 Predicted membrane protein 3 4 4 5 ------||-|--||---------------------------------------------------- 5 [S] COG2428 Uncharacterized conserved protein 2 3 4 5 ------|||--||----------------------------------------------------- 5 [C] COG2441 Predicted butyrate kinase 1 4 4 5 |-----||||-------------------------------------------------------- 5 [R] COG2517 Predicted RNA-binding protein containing a C-terminal EMAP domain 3 3 3 5 ------------------------|-----|-------------------------|||------- 17 [S] COG2604 Uncharacterized protein conserved in bacteria 3 5 5 5 |-|-----|--------|------------|----------------------------------- 6 [R] COG2768 Uncharacterized Fe-S center protein 1 3 3 5 --------------------------------------------------||-||---|------- 5 [S] COG2830 Uncharacterized protein conserved in bacteria 1 5 5 5 ||||----|--------------------------------------------------------- 12 [S] COG2881 Uncharacterized protein conserved in archaea 3 5 5 5 -------------||--|----------------------------------|--|---------- 7 [S] COG2930 Uncharacterized conserved protein 2 3 4 5 ------------------------------------|-----------|---|||----------- 10 [L] COG2946 Putative phage replication protein RstA 2 4 5 5 ------------------|-----------------------------|----|-|----|----- 6 [O] COG2994 ACP:hemolysin acyltransferase (hemolysin-activating protein) 3 5 5 5 |---------|-------------------------------------|------|--|------- 5 [H] COG2998 ABC-type tungstate transport system, permease component 2 2 5 5 ------------------------------|--------------|--||--|------------- 7 [S] COG3007 Uncharacterized paraquat-inducible protein B 2 3 5 5 ---------------------|------------------------|--||---------|----- 8 [R] COG3179 Predicted chitinase 2 4 5 5 ---|--------------------------------------------||---|---------|-- 6 [S] COG3205 Predicted membrane protein 1 2 4 5 -------------------------------------------------|--||||---------- 5 [NU] COG3215 Tfp pilus assembly protein PilZ 1 2 3 5 -------------------------------------------------|||-||----------- 6 [S] COG3219 Uncharacterized protein conserved in bacteria 3 4 4 5 ------------------||-------||--------------------|---------------- 5 [S] COG3222 Uncharacterized protein conserved in bacteria 3 4 4 5 ------------------||----||-----------------------|---------------- 6 [N] COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component 2 4 4 5 ---------------------|---------------------------|---||----|------ 6 [P] COG3230 Heme oxygenase 4 4 5 5 -------------------|-|----|---------------|------|---------------- 5 [S] COG3236 Uncharacterized protein conserved in bacteria 2 5 5 5 ------------------|------------------------------|-----|--|--|---- 7 [C] COG3258 Cytochrome c 2 2 4 5 ---------------------------||-----------------|-||---------------- 9 [U] COG3267 Type II secretory pathway, component ExeA (predicted ATPase) 3 4 5 5 -|-|------|-|--------|-------------------------------------------- 5 [S] COG3294 Uncharacterized conserved protein 2 4 5 5 ---------------------|--------------------------|---|--|-------|-- 5 [S] COG3295 Uncharacterized protein conserved in bacteria 4 5 5 5 ------------------||-|------------|--------------|---------------- 5 [S] COG3296 Uncharacterized protein conserved in bacteria 1 2 4 5 ------------------------------------------|--|--||-------------|-- 6 [U] COG3297 Type II secretory pathway, component PulL 1 2 2 5 -----------------------------------------------------||-|||------- 6 [L] COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 1 2 4 5 ------------------------------------------------||---|||---------- 5 [S] COG3308 Predicted membrane protein 1 3 4 5 --------------------------------------------------|-||--||-------- 6 [S] COG3309 Uncharacterized virulence-associated protein D 1 2 4 5 ------------------------------------------------|---||||---------- 5 [S] COG3310 Uncharacterized protein conserved in bacteria 3 5 5 5 -----------------|||----------|------|---------------------------- 6 [S] COG3330 Uncharacterized protein conserved in bacteria 3 5 5 5 -------------||--|------------|------|---------------------------- 6 [R] COG3341 Predicted double-stranded RNA/RNA-DNA hybrid binding protein 3 3 5 5 -----------------|---------------|---|-------|--|----------------- 5 [G] COG3345 Alpha-galactosidase 3 4 4 5 ---|--------------||-------||------------------------------------- 13 [S] COG3349 Uncharacterized conserved protein 1 4 4 5 -|-|||-|---------------------------------------------------------- 5 [N] COG3353 Putative archaeal flagellar protein F 1 5 5 5 |-||----||-------------------------------------------------------- 5 [R] COG3364 Zn-ribbon containing protein 1 5 5 5 |-||----||-------------------------------------------------------- 5 [S] COG3365 Uncharacterized protein conserved in archaea 1 5 5 5 -|||----||-------------------------------------------------------- 12 [S] COG3366 Uncharacterized protein conserved in archaea 1 3 3 5 -|--||||---------------------------------------------------------- 5 [S] COG3373 Uncharacterized protein conserved in archaea 3 5 5 5 ---|--------------||-----------------------------|-----|---------- 5 [R] COG3380 Predicted NAD/FAD-dependent oxidoreductase 1 4 4 5 --||||--|--------------------------------------------------------- 5 [S] COG3389 Uncharacterized protein conserved in archaea 3 3 3 5 --------------------|----------------|------------------|||------- 6 [L] COG3392 Adenine-specific DNA methylase 1 2 2 5 -----------------------------------------------------||-|||------- 5 [S] COG3399 Uncharacterized protein conserved in bacteria 2 2 2 5 ------------------------------------||------------------|||------- 8 [R] COG3401 Fibronectin type 3 domain-containing protein 1 3 5 5 -----------------------------------------------|-|--|--|---|------ 5 [S] COG3416 Uncharacterized protein conserved in bacteria 3 3 3 5 ---------------------|-----||-------||---------------------------- 10 [Q] COG3424 Predicted naringenin-chalcone synthase 3 4 4 5 -----------------|---|--------|----||----------------------------- 7 [C] COG3426 Butyrate kinase 1 4 4 5 --||||--|--------------------------------------------------------- 10 [S] COG3430 Uncharacterized protein conserved in archaea 2 4 4 5 ------------------||----------------------------|-----------|-|--- 5 [T] COG3452 Predicted periplasmic ligand-binding sensor domain 3 5 5 5 ---------------------|---------------|----|------------|----|----- 5 [Q] COG3460 Uncharacterized enzyme of phenylacetate metabolism 2 3 3 5 ----||||----------|----------------------------------------------- 7 [S] COG3463 Predicted membrane protein 2 3 3 5 ----||--|---------------------------||---------------------------- 5 [S] COG3465 Uncharacterized conserved protein 1 2 4 5 -------------------------------------------------|-|-|||---------- 5 [S] COG3471 Predicted periplasmic/secreted protein 4 5 5 5 -|-|-------------|-|------|--------------------------------------- 6 [S] COG3472 Uncharacterized conserved protein 3 4 5 5 -||-----------------|----------|----|----------------------------- 5 [R] COG3478 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain 2 4 5 5 ---------------------|---------------------------|-----|------||-- 6 [E] COG3483 Tryptophan 2,3-dioxygenase (vermilion) 1 2 3 5 ------------------------------------------------||---------||-|--- 5 [P] COG3487 Uncharacterized iron-regulated protein 1 2 3 5 ------------------------------------------------||---------||-|--- 5 [C] COG3488 Predicted thiol oxidoreductase 1 2 3 5 ------------------------------------------------||---------||-|--- 5 [R] COG3489 Predicted periplasmic lipoprotein 1 2 3 5 ------------------------------------------------||---------||-|--- 5 [S] COG3490 Uncharacterized protein conserved in bacteria 3 4 4 5 -------------|-----|----------------------------|-----------|-|--- 5 [S] COG3506 Uncharacterized conserved protein 2 4 5 5 --------------------------------|--|---------------|--|---|------- 5 [S] COG3513 Uncharacterized protein conserved in bacteria 1 4 4 5 ---------------------------------------------------|-||---|-|----- 5 [M] COG3524 Capsule polysaccharide export protein 1 1 3 5 -------------------------------------------|-||-||---------------- 5 [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain 1 3 5 5 ---------------------------------------------|--||-----|------|--- 8 [O] COG3531 Predicted protein-disulfide isomerase 4 4 5 5 |--------------------|---------|------------------------------||-- 11 [S] COG3548 Predicted integral membrane protein 1 2 4 5 ------------------------------------------------||-----------|||-- 5 [S] COG3553 Uncharacterized protein conserved in bacteria 2 3 3 5 ---------------------------||--------------------|----------|-|--- 6 [S] COG3554 Uncharacterized protein conserved in bacteria 2 2 3 5 --------------------------|||--|-----|---------------------------- 5 [M] COG3559 Putative exporter of polyketide antibiotics 1 4 4 5 ---------------------------------------------------|-||---|-|----- 6 [M] COG3562 Capsule polysaccharide export protein 1 4 4 5 ---------------------------------------------------|-||---|-|----- 7 [M] COG3563 Capsule polysaccharide export protein 2 3 3 5 ---------------------|---------------------------|---------||-|--- 5 [V] COG3570 Streptomycin 6-kinase 2 3 3 5 ---------------------------||--------------------|----------|-|--- 5 [R] COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold 4 5 5 5 ------------------||-|---------|-------------------------|-------- 5 [S] COG3597 Uncharacterized protein/domain associated with GTPases 1 2 4 5 ------------------------------------------------||----------|-||-- 5 [S] COG3602 Uncharacterized protein conserved in bacteria 1 4 4 5 --||||--|--------------------------------------------------------- 5 [S] COG3612 Uncharacterized protein conserved in archaea 3 4 5 5 ------------------|--|--------------------------||------------|--- 5 [T] COG3614 Predicted periplasmic ligand-binding sensor domain 3 4 4 5 -------------------|----------------|-----------|---------------|| 5 [R] COG3621 Patatin 1 5 5 5 |||-----||-------------------------------------------------------- 17 [D] COG3640 CO dehydrogenase maturation factor 4 4 4 5 ----||-----------|--|-----------|--------------------------------- 6 [E] COG3643 Glutamate formiminotransferase 1 1 3 5 ------------------------------------------|||---|--|-------------- 5 [S] COG3647 Predicted membrane protein 3 4 4 5 ------------------||-------||----------------------------------|-- 5 [S] COG3651 Uncharacterized protein conserved in bacteria 2 3 4 5 ---------------------|---------------------------|----------|-||-- 7 [S] COG3652 Predicted outer membrane protein 3 4 4 5 -------|-------------------||--------------------------|-------|-- 5 [Q] COG3653 N-acyl-D-aspartate/D-glutamate deacylase 1 3 4 5 ------------------------------------------------|----|||-------|-- 6 [C] COG3658 Cytochrome b 1 2 4 5 ----------------------------------------------------|-------|--||| 5 [M] COG3660 Predicted nucleoside-diphosphate-sugar epimerase 2 4 4 5 ---------------------------||--------------------|-----|-------|-- 11 [S] COG3662 Uncharacterized protein conserved in bacteria 4 5 5 5 -----------|-----|---------------|------------------|----------|-- 7 [G] COG3669 Alpha-L-fucosidase 2 3 3 5 ---------------------|---------------------||--------||----------- 5 [S] COG3680 Uncharacterized protein conserved in bacteria 2 4 4 5 ---------------------------||--------------------|-----|-------|-- 7 [R] COG3687 Predicted metal-dependent hydrolase 1 3 4 5 ----------------------------------------------------|--|---|--||-- 7 [U] COG3701 Type IV secretory pathway, TrbF components 2 2 3 5 ---------------------------||-------------------------------|-||-- 15 [S] COG3742 Uncharacterized protein conserved in bacteria 2 2 3 5 -------------------------------||--------------------------|--||-- 8 [M] COG3754 Lipopolysaccharide biosynthesis protein 1 2 3 5 -------------------------------------------------|||-||----------- 6 [S] COG3767 Uncharacterized low-complexity protein 2 4 5 5 -------------||----------------------------------|-----------|-|-- 5 [S] COG3777 Uncharacterized conserved protein 2 4 4 5 -|----||-|--|----------------------------------------------------- 6 [L] COG3780 DNA endonuclease related to intein-encoded endonucleases 1 2 4 5 ----------------------------------------------|--|----------|-||-- 5 [S] COG3811 Uncharacterized protein conserved in bacteria 1 2 3 5 -------------------------------------------------|---------||-||-- 5 [S] COG3821 Predicted membrane protein 4 5 5 5 ---------------------|----|-----|------------|-----------------|-- 5 [O] COG3823 Glutamine cyclotransferase 2 4 5 5 -------------------|-----------------------------|-----|------||-- 5 [S] COG3825 Uncharacterized protein conserved in bacteria 2 3 4 5 ---------------------------||--------------------------|------||-- 5 [S] COG3826 Uncharacterized protein conserved in bacteria 2 2 3 5 -------------------------------------|---------------------||-||-- 5 [S] COG3828 Uncharacterized protein conserved in bacteria 2 4 4 5 ------------------||----------|-----||---------------------------- 5 [S] COG3854 Uncharacterized protein conserved in bacteria 2 3 3 5 ---------------------------||-|-----||---------------------------- 5 [S] COG3856 Uncharacterized conserved protein (small basic protein) 3 4 4 5 -----------------|------------|-----||-------|-------------------- 5 [G] COG3867 Arabinogalactan endo-1,4-beta-galactosidase 4 5 5 5 ----------------|----|--------|------------------|-----|---------- 7 [S] COG3868 Uncharacterized conserved protein 2 4 4 5 |-|---------------------------|-----||---------------------------- 6 [S] COG3874 Uncharacterized conserved protein 2 3 3 5 ----------------------||------|-----||---------------------------- 5 [S] COG3876 Uncharacterized protein conserved in bacteria 2 3 3 5 ---------------------------||-|-----||---------------------------- 12 [S] COG3879 Uncharacterized protein conserved in bacteria 2 2 4 5 ------||--|||----------------------------------------------------- 5 [R] COG3889 Predicted solute binding protein 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG3898 Uncharacterized membrane-bound protein 2 2 2 5 ---------------------------|||------------------------------|-|--- 17 [R] COG3903 Predicted ATPase 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG3908 Uncharacterized protein conserved in bacteria 4 4 4 5 --|-----------------------|----------|---------------------|--|--- 6 [R] COG3910 Predicted ATPase 1 2 2 5 -------------------------------------------------|---------||||--- 10 [E] COG3931 Predicted N-formylglutamate amidohydrolase 2 3 4 5 ------------------||---------------------------------------||--|-- 7 [R] COG3932 Uncharacterized ABC-type transport system, permease components 3 5 5 5 --|---------------||----------|------|---------------------------- 7 [S] COG3937 Uncharacterized conserved protein 1 2 2 5 -------------------------------------------------|---------||||--- 11 [E] COG3938 Proline racemase 1 1 4 5 --------------------------------------------||--|||--------------- 5 [R] COG3941 Mu-like prophage protein 2 2 3 5 -------------------------------||||----------------------------|-- 20 [R] COG3942 Surface antigen 1 2 3 5 ---------------------------------------------||--|---||----------- 5 [R] COG3943 Virulence protein 3 3 5 5 ----------|||-----------------|-----------------|----------------- 6 [S] COG3945 Uncharacterized conserved protein 2 3 3 5 ----------------------||----------------------------|------|--|--- 5 [S] COG3952 Predicted membrane protein 2 3 4 5 -------------------------------------|-------|--|----------||----- 5 [P] COG3965 Predicted Co/Zn/Cd cation transporters 1 4 4 5 --|-||--||-------------------------------------------------------- 5 [S] COG4004 Uncharacterized protein conserved in archaea 2 5 5 5 |-|------|---||--------------------------------------------------- 5 [S] COG4021 Uncharacterized conserved protein 2 3 4 5 ------||-|-||----------------------------------------------------- 5 [R] COG4028 Predicted P-loop ATPase/GTPase 2 3 5 5 --------|||||----------------------------------------------------- 5 [S] COG4034 Uncharacterized protein conserved in archaea 1 4 4 5 --||--||-|-------------------------------------------------------- 5 [S] COG4044 Uncharacterized protein conserved in archaea 2 3 5 5 |--------||||----------------------------------------------------- 5 [S] COG4046 Uncharacterized protein conserved in archaea 2 3 4 5 ------||-||-|----------------------------------------------------- 5 [S] COG4047 Uncharacterized protein conserved in archaea 2 3 5 5 -|-------||||----------------------------------------------------- 6 [L] COG4080 RecB-family nuclease 2 4 4 5 ||-------|--------------------------||---------------------------- 5 [R] COG4085 Predicted RNA-binding protein, contains TRAM domain 2 4 5 5 --|-----||||------------------------------------------------------ 5 [S] COG4089 Predicted membrane protein 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG4093 Uncharacterized protein conserved in bacteria 2 3 4 5 ------------------||---------------------------------------||--|-- 7 [S] COG4094 Predicted membrane protein 3 4 5 5 -------------------|----------|--|--------------||---------------- 5 [P] COG4097 Predicted ferric reductase 1 2 2 5 ------------------------------------------------|----------||||--- 7 [S] COG4103 Uncharacterized protein conserved in bacteria 3 3 3 5 ---------------------|--------|------------|||-------------------- 6 [R] COG4110 Uncharacterized protein involved in stress response 1 3 3 5 ----------------------------------------------|--------|---||-|--- 5 [G] COG4130 Predicted sugar epimerase 1 2 3 5 ------------------------------------------|||---|-----------|----- 5 [R] COG4135 ABC-type uncharacterized transport system, permease component 1 2 3 5 ------------------------------------------|||---|-----------|----- 5 [R] COG4136 ABC-type uncharacterized transport system, ATPase component 1 2 3 5 -------------------------------------------|||-----|----------|--- 6 [R] COG4158 Predicted ABC-type sugar transport system, permease component 4 5 5 5 ----|------|--------------|---|----|------------------------------ 6 [R] COG4194 Predicted membrane protein 2 2 2 5 ---------------------------|||-----------------------------|--|--- 5 [S] COG4196 Uncharacterized protein conserved in bacteria 1 2 3 5 ------------------------------------------|||-------|------|------ 8 [S] COG4197 Uncharacterized protein conserved in bacteria, prophage-related 3 4 4 5 ----||-----------|------------|----|------------------------------ 5 [S] COG4198 Uncharacterized conserved protein 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG4223 Uncharacterized protein conserved in bacteria 1 2 3 5 --------------------------------------------||----|--||----------- 6 [R] COG4228 Mu-like prophage DNA circulation protein 3 4 5 5 -------------||-|--------------------------------|--|------------- 5 [C] COG4229 Predicted enolase-phosphatase 3 3 3 5 -------------------|-|--------------------|||--------------------- 5 [R] COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains 3 5 5 5 ------------------||-|---------------------------|---------|------ 7 [T] COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) 1 2 4 5 ---------------------------------------------|---|---|||---------- 6 [S] COG4259 Uncharacterized protein conserved in bacteria 3 3 3 5 ----------------|---------|||--------------------------|---------- 6 [R] COG4262 Predicted spermidine synthase with an N-terminal membrane domain 2 5 5 5 -------------||----------------------------------|-----|----|----- 5 [F] COG4266 Allantoicase 4 5 5 5 -----------------|--|---------|------------------|-----|---------- 5 [S] COG4267 Predicted membrane protein 3 5 5 5 --|------------------------------------|------------|--|-------|-- 5 [K] COG4271 Predicted nucleotide-binding protein containing TIR -like domain 3 3 4 5 ----||-----|-------------------|---|------------------------------ 5 [S] COG4272 Predicted membrane protein 3 4 4 5 --------|-|--------------------------------------------|----|-|--- 7 [S] COG4274 Uncharacterized conserved protein 4 4 5 5 |-------------------|---------|----------------------------|---|-- 5 [R] COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif 3 4 4 5 -------------||-------||-----------------------------------------| 5 [S] COG4285 Uncharacterized conserved protein 4 4 4 5 --------------|----|-|--------------||---------------------------- 5 [L] COG4294 UV damage repair endonuclease 2 3 3 5 ---------------------------||--------------------------|---|--|--- 5 [S] COG4307 Uncharacterized protein conserved in bacteria 1 3 3 5 -------------------------------------------------|-----|---||-|--- 10 [S] COG4312 Uncharacterized protein conserved in bacteria 2 4 4 5 -------------------------------------|-----------|-----|---||----- 5 [S] COG4317 Uncharacterized protein conserved in bacteria 3 3 3 5 -------------------|------|||----------------------|-------------- 5 [S] COG4325 Predicted membrane protein 3 4 4 5 ------------------||-------||-------------------------------|----- 5 [S] COG4328 Uncharacterized protein conserved in bacteria 3 4 4 5 ------------------||----|---------||------------------------------ 5 [S] COG4330 Predicted membrane protein 4 5 5 5 --------------|-----------|---------|------------|---------|------ 5 [S] COG4336 Uncharacterized conserved protein 2 2 4 5 ------||--|||----------------------------------------------------- 5 [S] COG4345 Uncharacterized protein conserved in archaea 2 2 4 5 ------||--|||----------------------------------------------------- 5 [O] COG4346 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase 2 2 2 5 ---|------------------------------||||---------------------------- 5 [S] COG4347 Predicted membrane protein 2 3 4 5 -------------||-----------------|||------------------------------- 5 [S] COG4357 Uncharacterized conserved protein 1 2 3 5 --------------------------------------------||----|--||----------- 6 [R] COG4379 Mu-like prophage tail protein gpP 1 2 4 5 ---------------------------------------------|---|---|||---------- 6 [S] COG4380 Uncharacterized protein conserved in bacteria 1 2 3 5 --------------------------------------------||----|--||----------- 6 [S] COG4381 Mu-like prophage protein gp46 1 2 3 5 --------------------------------------------||----|--||----------- 6 [S] COG4384 Mu-like prophage protein gp45 1 3 5 5 ----------------------------------------------|--|--|--|---|------ 7 [R] COG4385 Bacteriophage P2-related tail formation protein 1 2 3 5 --------------------------------------------||----|--||----------- 5 [R] COG4386 Mu-like prophage tail sheath protein gpL 2 3 3 5 ------------------||---------------|||---------------------------- 5 [E] COG4401 Chorismate mutase 2 3 4 5 -------------------|----------|-||---|---------------------------- 7 [V] COG4403 Lantibiotic modifying enzyme 3 3 5 5 --------------------------|------|------------|-|--|-------------- 7 [G] COG4409 Neuraminidase (sialidase) 2 2 3 5 ---------------------------||------------------------------||--|-- 5 [S] COG4427 Uncharacterized protein conserved in bacteria 1 2 3 5 ------------------------------|--||-||---------------------------- 7 [GM] COG4464 Capsular polysaccharide biosynthesis protein 1 3 3 5 ------------------------------||||-----|-------------------------- 5 [S] COG4478 Predicted membrane protein 1 1 2 5 -------------------------------||||-|----------------------------- 5 [S] COG4485 Predicted membrane protein 2 3 3 5 --------------------|---------|---|-||---------------------------- 5 [R] COG4492 ACT domain-containing protein 1 1 2 5 -------------------------------|--||||---------------------------- 5 [S] COG4493 Uncharacterized protein conserved in bacteria 1 2 2 5 ------------------------------|---||||---------------------------- 5 [S] COG4499 Predicted membrane protein 1 2 2 5 ------------------------------|---||||---------------------------- 5 [S] COG4506 Uncharacterized protein conserved in bacteria 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG4530 Uncharacterized protein conserved in bacteria 1 2 4 5 ---------------------------------------------||--|--|--|---------- 7 [R] COG4540 Phage P2 baseplate assembly protein gpV 1 2 2 5 -------------------------------------------------------|---||||--- 8 [S] COG4541 Predicted membrane protein 1 1 2 5 -----------------------------------------------------------|||||-- 8 [S] COG4544 Uncharacterized conserved protein 1 3 4 5 -------------------------------------------||---|---------|-|----- 6 [R] COG4588 Accessory colonization factor AcfC, contains ABC-type periplasmic domain 4 5 5 5 -------------|||-|------------|----------------------------------- 8 [R] COG4624 Iron only hydrogenase large subunit, C-terminal domain 4 5 5 5 ----------------|-||-|-----------------------------------------|-- 105 [S] COG4636 Uncharacterized protein conserved in cyanobacteria 5 5 5 5 -------------------|||--------|---------------------------|------- 7 [R] COG4639 Predicted kinase 3 4 4 5 ---------------------|--------|--------------|-------------|--|--- 12 [L] COG4644 Transposase and inactivated derivatives, TnpA family 1 2 2 5 ------------------------------------------------|----------||||--- 5 [S] COG4645 Uncharacterized protein conserved in bacteria 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG4649 Uncharacterized protein conserved in bacteria 1 3 3 5 -------------------------------------------------|-----|---||-|--- 5 [S] COG4655 Predicted membrane protein 3 5 5 5 |---------|-------------------------------------|------|--|------- 5 [H] COG4662 ABC-type tungstate transport system, periplasmic component 2 3 3 5 ------------------||---------------------------------------||-|--- 10 [R] COG4671 Predicted glycosyl transferase 1 2 3 5 ------------------------------------------|||----|-----|---------- 7 [S] COG4676 Uncharacterized protein conserved in bacteria 2 4 4 5 ------------------||-----------------------||----------|---------- 7 [G] COG4678 Muramidase (phage lambda lysozyme) 1 2 3 5 ------------------------------------------|||----|-----|---------- 5 [S] COG4685 Uncharacterized protein conserved in bacteria 1 2 3 5 ------------------------------||||-|------------------------------ 6 [S] COG4687 Uncharacterized protein conserved in bacteria 3 3 4 5 --|----------------------------||-------------|--|---------------- 7 [E] COG4690 Dipeptidase 1 3 3 5 ----------------------------------------------|---------||-||----- 5 [G] COG4692 Predicted neuraminidase (sialidase) 1 1 2 5 -------------------------------||--|||---------------------------- 5 [S] COG4698 Uncharacterized protein conserved in bacteria 1 1 2 5 -------------------------------|||||------------------------------ 5 [S] COG4699 Uncharacterized protein conserved in bacteria 1 1 2 5 -------------------------------|||-||----------------------------- 5 [S] COG4703 Uncharacterized protein conserved in bacteria 1 2 3 5 ------------------------------||||-|------------------------------ 5 [S] COG4708 Predicted membrane protein 3 3 3 5 --|-------------------------------|||-----------------------|----- 5 [S] COG4717 Uncharacterized conserved protein 1 2 4 5 -------------------------------------------------|--||||---------- 8 [NU] COG4726 Tfp pilus assembly protein PilX 3 4 5 5 ---|----|----------------------------|-----------|-|-------------- 5 [S] COG4729 Uncharacterized conserved protein 3 4 4 5 --|-||----|------|------------------------------------------------ 5 [F] COG4741 Predicted secreted endonuclease distantly related to archaeal Holliday junction resolvase 5 5 5 5 --|----------------|-----||--------|------------------------------ 5 [S] COG4748 Uncharacterized conserved protein 2 2 2 5 --------------------------||||----------------------|------------- 5 [S] COG4760 Predicted membrane protein 2 3 3 5 --------------------------|---------------|||-----------------|--- 5 [S] COG4763 Predicted membrane protein 1 2 2 5 -------------------------------------------------|---------||||--- 5 [S] COG4764 Uncharacterized protein conserved in bacteria 4 4 5 5 -----------------|--|---|------|---|------------------------------ 5 [S] COG4769 Predicted membrane protein 1 1 2 5 -------------------------------|||||------------------------------ 5 [C] COG4781 Membrane domain of membrane-anchored glycerophosphoryl diester phosphodiesterase 1 2 2 5 -------------------------------------------------|---------||||--- 5 [R] COG4784 Putative Zn-dependent protease 2 5 5 5 |-|-----|---------||---------------------------------------------- 6 [C] COG4802 Ferredoxin-thioredoxin reductase, catalytic subunit 2 2 2 5 --------------------------||||-------|---------------------------- 5 [S] COG4825 Uncharacterized membrane-anchored protein conserved in bacteria 3 4 5 5 ----------||-|||-------------------------------------------------- 7 [J] COG4830 Ribosomal protein S26 4 4 4 5 --|-----------------|-----------------|-----------------||-------- 5 [S] COG4866 Uncharacterized conserved protein 4 5 5 5 --|-----|-----------|---------|---------------------|------------- 9 [O] COG4870 Cysteine protease 3 4 4 5 --|------------------------||-|----|------------------------------ 7 [R] COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain 4 4 5 5 ---------||-|-------------------------|----------------------|---- 6 [S] COG4933 Uncharacterized conserved protein 4 5 5 5 --|----------||----|----------------------------|----------------- 8 [O] COG4935 Regulatory P domain of the subtilisin-like proprotein convertases and other proteases 1 3 4 5 -------------------------------------------------|-----|----|-||-- 9 [K] COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG4944 Uncharacterized protein conserved in bacteria 1 1 2 5 -----------------------------------------------------------|||||-- 17 [K] COG4957 Predicted transcriptional regulator 1 2 4 5 -------------------------------------------------|--||||---------- 9 [NU] COG4966 Tfp pilus assembly protein PilW 1 1 2 5 -------------------------------||-|||----------------------------- 8 [G] COG4975 Putative glucose uptake permease 1 1 2 5 -----------------------------------------------------------|||||-- 7 [R] COG4976 Predicted methyltransferase (contains TPR repeat) 2 4 5 5 |--|----|-||------------------------------------------------------ 5 [R] COG5258 GTPase 3 5 5 5 -------------||---|-----------|-|--------------------------------- 6 [D] COG5279 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain 2 2 2 5 ---|----------------------||||------------------------------------ 7 [S] COG5282 Uncharacterized conserved protein 2 4 4 5 -||---||-----------------------------------------|---------------- 6 [S] COG5306 Uncharacterized conserved protein 2 2 2 5 --|--------------------------------------------------------||||--- 6 [Q] COG5310 Homospermidine synthase 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5317 Uncharacterized protein conserved in bacteria 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5321 Uncharacterized protein conserved in bacteria 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5328 Uncharacterized protein conserved in bacteria 1 1 2 5 -----------------------------------------------------------|||||-- 9 [S] COG5330 Uncharacterized protein conserved in bacteria 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5338 Uncharacterized protein conserved in bacteria 2 3 3 5 ---|--||-------------------||------------------------------------- 7 [K] COG5340 Predicted transcriptional regulator 1 1 2 5 -----------------------------------------------------------||||--| 14 [R] COG5342 Invasion protein B, involved in pathogenesis 1 2 2 5 -------------------------------------------------|---------||||--- 5 [S] COG5345 Uncharacterized protein conserved in bacteria 2 3 3 5 -------------------|---------------------------------||---------|| 5 [S] COG5346 Predicted membrane protein 1 1 2 5 -----------------------------------------------------------|||||-- 12 [S] COG5349 Uncharacterized protein conserved in bacteria 2 2 2 5 -----------------------------------|-----------------------||||--- 6 [R] COG5350 Predicted protein tyrosine phosphatase 1 1 2 5 -------------------------------|-|-|||---------------------------- 5 [S] COG5353 Uncharacterized protein conserved in bacteria 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5360 Uncharacterized protein conserved in bacteria 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5385 Uncharacterized protein conserved in bacteria 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5388 Uncharacterized protein conserved in bacteria 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5389 Uncharacterized protein conserved in bacteria 1 2 3 5 -------------------------------------------------------|---||-||-- 5 [S] COG5394 Uncharacterized protein conserved in bacteria 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5400 Uncharacterized protein conserved in bacteria 2 2 2 5 --------|--------------------------------------------------||||--- 5 [S] COG5402 Uncharacterized conserved protein 1 1 2 5 -----------------------------------------------------------|||||-- 7 [E] COG5425 Usg protein, probable subunit of phosphoribosylanthranilate isomerase 2 2 3 5 -----------------------------------|-|---------------------|-|-|-- 5 [S] COG5437 Predicted secreted protein 3 4 5 5 --------------------|-----|---||--|------------------------------- 10 [S] COG5438 Predicted multitransmembrane protein 1 1 2 5 -----------------------------------------------------------|||||-- 5 [N] COG5442 Flagellar biosynthesis regulator FlaF 1 1 2 5 -----------------------------------------------------------|||||-- 5 [N] COG5443 Flagellar biosynthesis regulator FlbT 1 2 3 5 ------------------------------------------|||----|-----|---------- 8 [S] COG5445 Predicted secreted protein 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5447 Uncharacterized conserved protein 2 2 3 5 ---------------------------|||-----------------------------|---|-- 16 [K] COG5450 Transcription regulator of the Arc/MetJ class 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5451 Predicted secreted protein 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5452 Uncharacterized conserved protein 1 2 2 5 ------------------------------------------------|----------||||--- 5 [S] COG5453 Uncharacterized conserved protein 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5454 Predicted secreted protein 1 1 2 5 -----------------------------------------------------------|||||-- 6 [P] COG5456 Predicted integral membrane protein linked to a cation pump 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5458 Uncharacterized conserved protein 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5468 Predicted secreted (periplasmic) protein 1 2 3 5 -------------------------------------------||-|-----|------|------ 7 [S] COG5471 Uncharacterized conserved protein 1 2 2 5 -------------------------------------------------------|---||||--- 12 [S] COG5476 Uncharacterized conserved protein 2 2 2 5 ------------------|----------------------------------------||||--- 6 [S] COG5480 Predicted integral membrane protein 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5481 Uncharacterized conserved small protein containing a coiled-coil domain 1 2 3 5 -------------------------------------------------------|---||-||-- 9 [S] COG5489 Uncharacterized conserved protein 3 3 3 5 -----------------|---------|||-------------------------|---------- 5 [S] COG5495 Uncharacterized conserved protein 3 3 3 5 ---------------------|--||----------------------------------|-|--- 7 [S] COG5497 Predicted secreted protein 1 1 2 5 --------------------------------||-|||---------------------------- 5 [S] COG5506 Uncharacterized conserved protein 1 2 2 5 ------------------------------------------|||---------------|-|--- 6 [S] COG5507 Uncharacterized conserved protein 1 2 3 5 -------------------------------------------||-|-----|--|---------- 22 [R] COG5511 Bacteriophage capsid protein 1 2 3 5 ------------------------------||||-|------------------------------ 6 [S] COG5523 Predicted integral membrane protein 3 4 4 5 -------------|||------||------------------------------------------ 11 [B] COG5531 SWIB-domain-containing proteins implicated in chromatin remodeling 4 5 5 5 -------------|||---|----------|----------------------------------- 7 [S] COG5542 Predicted integral membrane protein 4 4 4 5 --------|-|--------|-------||------------------------------------- 7 [S] COG5551 Uncharacterized conserved protein 1 1 2 5 -----------------------------------------------------------|||||-- 5 [S] COG5568 Uncharacterized small protein 2 2 2 5 ---------------------------||-------------------------------|||--- 5 [S] COG5586 Uncharacterized conserved protein 2 3 4 5 -------------||------------------------------------------------||| 5 [S] COG5590 Uncharacterized conserved protein 2 2 3 5 -------------------|-----------------------||-|-----|------------- 7 [S] COG5606 Uncharacterized conserved small protein 1 1 2 5 -------------------------------------------||||--|---------------- 5 [S] COG5613 Uncharacterized conserved protein 2 4 4 5 ------------------------------|------------||----------|---|------ 13 [R] COG5614 Bacteriophage head-tail adaptor 3 4 4 5 ---------------------|-----||-------------------|----------|------ 6 [R] COG5621 Predicted secreted hydrolase 1 1 2 5 -----------------------------------------------------------||-|-|| 7 [N] COG5622 Protein required for attachment to host cells 2 3 4 5 ------|||-|-|----------------------------------------------------- 5 [K] COG5625 Predicted transcription regulator containing HTH domain 2 3 3 5 ---------------------------||----------------|--------------|-|--- 9 [S] COG5654 Uncharacterized conserved protein 2 2 2 5 ------------------|----------------------------------------||||--- 5 [O] COG5661 Predicted secreted Zn-dependent protease