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Report for CCDS10230.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10230.1 Public Homo sapiens 15 SPESP1 24 110 108 CCDS HistoryNCBI Gene:246777Re-query CCDS DB by CCDS ID:10230.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10230.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310673.4 ENSP00000312284.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000310673.4Link to Ensembl Protein Viewer:ENSP00000312284.3Re-query CCDS DB by Nucleotide ID:ENST00000310673Re-query CCDS DB by Protein ID:ENSP00000312284
Original member Current member NCBI NM_145658.4 NP_663633.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145658.4Link to Protein Sequence:NP_663633.1Re-query CCDS DB by Nucleotide ID:NM_145658Re-query CCDS DB by Protein ID:NP_663633Link to BLAST:NP_663633.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663633.1 350 Q6UW49 350 100% 0 0

Chromosomal Locations for CCDS 10230.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 68930654 68930717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 68945599 68946587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1053 nt):
ATGAAGCCCTTAGTCCTTCTAGTTGCGCTTTTGCTATGGCCTTCGTCTGTGCCGGCTTATCCGAGCATAA
CTGTGACACCTGATGAAGAGCAAAACTTGAATCATTATATACAAGTTTTAGAGAACCTAGTACGAAGTGT
TCCCTCTGGGGAGCCAGGTCGTGAGAAAAAATCTAACTCTCCAAAACATGTTTATTCTATAGCATCAAAG
GGATCAAAATTTAAGGAGCTAGTTACACATGGAGACGCTTCAACTGAGAATGATGTTTTAACCAATCCTA
TCAGTGAAGAAACTACAACTTTCCCTACAGGAGGCTTCACACCGGAAATAGGAAAGAAAAAACACACGGA
AAGTACCCCATTCTGGTCGATCAAACCAAACAATGTTTCCATTGTTTTGCATGCAGAGGAACCTTATATT
GAAAATGAAGAGCCAGAGCCAGAGCCGGAGCCAGCTGCAAAACAAACTGAGGCACCAAGAATGTTGCCAG
TTGTTACTGAATCATCTACAAGTCCATATGTTACCTCATACAAGTCACCTGTCACCACTTTAGATAAGAG
CACTGGCATTGGGATCTCTACAGAATCAGAAGATGTTCCTCAGCTCTCAGGTGAAACTGCGATAGAAAAA
CCCGAAGAGTTTGGAAAGCACCCAGAGAGTTGGAATAATGATGACATTTTGAAAAAAATTTTAGATATTA
ATTCACAAGTGCAACAGGCACTTCTTAGTGACACCAGCAACCCAGCATATAGAGAAGATATTGAAGCCTC
TAAAGATCACCTAAAACGAAGCCTTGCTCTAGCAGCAGCAGCAGAACATAAATTAAAAACAATGTATAAG
TCCCAGTTATTGCCAGTAGGACGAACAAGTAATAAAATTGATGACATCGAAACTGTTATTAACATGCTGT
GTAATTCTAGATCTAAACTCTATGAATATTTAGATATTAAATGTGTTCCACCAGAGATGAGAGAAAAAGC
TGCTACAGTATTCAATACATTAAAAAATATGTGTAGATCAAGGAGAGTCACAGCCTTATTAAAAGTTTAT
TAA

Translation (350 aa):
MKPLVLLVALLLWPSSVPAYPSITVTPDEEQNLNHYIQVLENLVRSVPSGEPGREKKSNSPKHVYSIASK
GSKFKELVTHGDASTENDVLTNPISEETTTFPTGGFTPEIGKKKHTESTPFWSIKPNNVSIVLHAEEPYI
ENEEPEPEPEPAAKQTEAPRMLPVVTESSTSPYVTSYKSPVTTLDKSTGIGISTESEDVPQLSGETAIEK
PEEFGKHPESWNNDDILKKILDINSQVQQALLSDTSNPAYREDIEASKDHLKRSLALAAAAEHKLKTMYK
SQLLPVGRTSNKIDDIETVINMLCNSRSKLYEYLDIKCVPPEMREKAATVFNTLKNMCRSRRVTALLKVY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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