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Report for CCDS43858.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43858.1 Public Homo sapiens 9 TMEM245 24 110 108 CCDS HistoryNCBI Gene:23731Re-query CCDS DB by CCDS ID:43858.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43858.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374586.8 ENSP00000363714.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374586.8Link to Ensembl Protein Viewer:ENSP00000363714.3Re-query CCDS DB by Nucleotide ID:ENST00000374586Re-query CCDS DB by Protein ID:ENSP00000363714
Original member Current member NCBI NM_032012.4 NP_114401.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032012.4Link to Protein Sequence:NP_114401.2Re-query CCDS DB by Nucleotide ID:NM_032012Re-query CCDS DB by Protein ID:NP_114401Link to BLAST:NP_114401.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114401.2 879 Q9H330-2 879 100% 0 0

Chromosomal Locations for CCDS 43858.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 109020460 109020505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109033307 109033501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109036206 109036380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109038017 109038117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109050283 109050428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109050570 109050692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109057191 109057322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109060354 109060452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109064477 109064567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109073356 109073438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109080839 109080943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109085997 109086020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109087173 109087342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109090922 109091155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109093475 109093591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109106508 109106609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109108453 109108570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 109119335 109119913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2640 nt):
ATGGCCGACGGCGGCGGCCCTAAGGACGCGCCAAGCCTGCGGAGCTCTCCCGGGCCGGCGCCGCGGGTCC
CGCGCGCGGTCGGGCCGAGTGGCGGTGGCGGGGAGACCCCGCGGACCGCGGCGCTGGCGCTGCGCTTCGA
CAAGCCCATTAAGCAGGCCTTCTACAACACCGGGGCCGTGCTGTTCGTGTGCCTGTGCTGCGGCGCCGCG
GTGCTGGTCTACTTCATCCTGGAGGCCTTCCTGCGGCCGCTGCTCTGGGCCGTGCTATGCGGCACTTTTC
TGCACCCCTTCAAGAGCTCGCTGACGCGCCTGGGCCGCCACTGGCTGCAGCGCCTGCACCGCGCGCACAC
GCCCATCGTCCTGGCCGCGCTGCTCCTGCCGCTCTGCTTCGTCGACTACGGCGTCGAGGCCCTGGGCGAG
CAGGCGCTGCGCCGCCGCCGCCTGCTCCTGCTGCTCGGCGCCGGCGGCCCGCTCCTGTACGGCCTCTACT
GCCTCGGCAGCTACTTGGGCGTGCAGGTGCTGCTGGTGCACGCTGCCACGCTCATCTGCCGCGGGCTGGA
CTACTTCAGCAGCCTGTGGATCTGGACGTTGGTGGTTGGCTATGTGTTGACTGTTTCATTCAAGTGGAAT
GCAAGCACTGAACGCTACTTGAGAGCAGTTTCAATTCCTGTCTGGATTATATTGCTTTTTCATTTAGCAT
CCCTGGCTGGCTCATGGAGAATTCCAGTATTCCTGGTTATTGTTTTCCTGATGTCTGTGGGTACCCTCTA
TGAAAAACAGAATGGAAAAGAGTCTTCTGGGGCAGAGTTACCAGGGCAGGTTATCTCCATGGCAGCTTCT
ACTCTGGCAAACTTGGCCATCTCTATCACAGGGTATGAATCAAGCAGTGAAGACCAGCCCTCCACTCAGC
CTGCAGAAGCAGTGGACAGGGGAGAATCCGCTCCAACGTTGTCCACCTCCCCTTCACCCTCCTCCCCTTC
ACCCACTTCCCCTTCACCTACTCTGGGCAGACGAAGGCCTGAAATAGGAACGTTTCTTAGAAAGAAGAAA
ACTAGTGACATCTACTTTGTGTCTCTAGTTTGGGCCATTGTCGTCATGCAGATCTGGTTGAACCTGTGGA
TTGTGCAGTTGCTGCCAGTGCCGATTGCAGTCTGGATACTCAAAAAGCTTGTCATTCACTTTGGAGTTGT
GGATTTCCTAGAGAAACGCTACCATGTGTGGTGGGGCATTATAGAAAGCTTCCTGAAGGAGCGGCAGGGA
GCTCTCGCGCCTTGGCCCATTGTCGGGCTTGGAAAATTCTTGTTAAAAGTTGATAGCAAGCTCTGGCACT
GGCTAAATAAGAAGATGATCATCTGGTTGGAGAAGATGTTAGATAAAATAATTAGCATTTTCATCATATT
TTTGTTAGTGATAGGAACTCTTCTTTTAGCCCTACTCCTGACTGCAAAGGTACATCAAGAGAGTGTACAC
ATGATTGAAGTCACAAGTAATTTGATTAATGAAACTCTAGCAAATCACCCTGAGTGGGCAAATTGGCTTC
CTGAGGCTCAGGTAGTCCAAAGAGCCCTGAATTCTGCGGCTAACAACGTGTATCAGTATGGACGAGAATG
GATAACTCACAAGCTCCATAAAATTCTAGGAGATAAGGTGAACAATACTGCTGTAATTGAAAAGCAAGTA
CTAGAACTTTGGGACAGACTGTATCACTCTTGGTTTGTAAAGAATGTAACACACTCTGGAAGGCACAAAG
GACAGAAGTTGCATGTCAGTCGTCAGAATAGCTGGCTGGGAGACATTCTGGACTGGCAGGATATTGTTTC
CTTTGTTCACGAGAACATTGAGACATTTCTTTCGATCTTGGAGTCTCTGTGGATCGTTATGAGCCGGAAT
GTGAGCCTGCTGTTCACCACTGTCACTACACTCTTGACCATCCTCTTCTACAGCGGGACAGCCCTTCTCA
ATTTTGTACTCTCTCTGATAATTTTCCTGACCACACTATTTTATCTATTAAGTTCCAGTGATGAGTACTA
CAAGCCAGTGAAGTGGGTGATAAGCCTGACTCCACTATCTCAGCCAGGTCCTTCTTCTAATATTATTGGC
CAGTCTGTGGAAGAAGCTATCAGAGGGGTGTTTGATGCTTCCCTCAAAATGGCTGGCTTCTATGGATTGT
ATACCTGGCTGACTCATACTATGTTTGGCATCAATATTGTCTTCATACCATCAGCATTAGCAGCAATCCT
TGGAGCAGTGCCATTCCTGGGGACATACTGGGCAGCAGTACCTGCAGTTCTTGACCTGTGGCTGACACAA
GGGTTAGGATGCAAGGCCATTTTACTGTTGATTTTTCATCTCTTGCCAACATACTTTGTAGATACTGCAA
TCTACTCTGACATATCAGGAGGTGGCCATCCTTACCTGACAGGCTTGGCAGTGGCCGGTGGAGCATACTA
CCTAGGCCTGGAAGGAGCAATCATCGGTCCTATTCTTCTCTGCATACTTGTGGTTGCTTCCAATATCTAT
AGTGCCATGCTAGTGAGTCCCACGAATTCAGTTCCCACGCCAAACCAGACCCCATGGCCTGCTCAGCCTC
AGCGGACTTTCCGTGACATTTCTGAAGATCTGAAATCTTCAGTAGGTTGA

Translation (879 aa):
MADGGGPKDAPSLRSSPGPAPRVPRAVGPSGGGGETPRTAALALRFDKPIKQAFYNTGAVLFVCLCCGAA
VLVYFILEAFLRPLLWAVLCGTFLHPFKSSLTRLGRHWLQRLHRAHTPIVLAALLLPLCFVDYGVEALGE
QALRRRRLLLLLGAGGPLLYGLYCLGSYLGVQVLLVHAATLICRGLDYFSSLWIWTLVVGYVLTVSFKWN
ASTERYLRAVSIPVWIILLFHLASLAGSWRIPVFLVIVFLMSVGTLYEKQNGKESSGAELPGQVISMAAS
TLANLAISITGYESSSEDQPSTQPAEAVDRGESAPTLSTSPSPSSPSPTSPSPTLGRRRPEIGTFLRKKK
TSDIYFVSLVWAIVVMQIWLNLWIVQLLPVPIAVWILKKLVIHFGVVDFLEKRYHVWWGIIESFLKERQG
ALAPWPIVGLGKFLLKVDSKLWHWLNKKMIIWLEKMLDKIISIFIIFLLVIGTLLLALLLTAKVHQESVH
MIEVTSNLINETLANHPEWANWLPEAQVVQRALNSAANNVYQYGREWITHKLHKILGDKVNNTAVIEKQV
LELWDRLYHSWFVKNVTHSGRHKGQKLHVSRQNSWLGDILDWQDIVSFVHENIETFLSILESLWIVMSRN
VSLLFTTVTTLLTILFYSGTALLNFVLSLIIFLTTLFYLLSSSDEYYKPVKWVISLTPLSQPGPSSNIIG
QSVEEAIRGVFDASLKMAGFYGLYTWLTHTMFGINIVFIPSALAAILGAVPFLGTYWAAVPAVLDLWLTQ
GLGCKAILLLIFHLLPTYFVDTAIYSDISGGGHPYLTGLAVAGGAYYLGLEGAIIGPILLCILVVASNIY
SAMLVSPTNSVPTPNQTPWPAQPQRTFRDISEDLKSSVG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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