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Report for CCDS9715.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9715.1 Public Homo sapiens 14 BMP4 24 110 108 CCDS HistoryNCBI Gene:652Re-query CCDS DB by CCDS ID:9715.1Re-query CCDS DB by GeneID:652See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9715.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000245451.9 ENSP00000245451.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000245451.9Link to Ensembl Protein Viewer:ENSP00000245451.4Re-query CCDS DB by Nucleotide ID:ENST00000245451Re-query CCDS DB by Protein ID:ENSP00000245451
Original member Current member EBI ENST00000417573.5 ENSP00000394165.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000417573.5Link to Ensembl Protein Viewer:ENSP00000394165.1Re-query CCDS DB by Nucleotide ID:ENST00000417573Re-query CCDS DB by Protein ID:ENSP00000394165
Original member Current member EBI ENST00000559087.5 ENSP00000453485.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000559087.5Link to Ensembl Protein Viewer:ENSP00000453485.1Re-query CCDS DB by Nucleotide ID:ENST00000559087Re-query CCDS DB by Protein ID:ENSP00000453485
Original member Current member EBI ENST00000558984.1 ENSP00000454134.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000558984.1Link to Ensembl Protein Viewer:ENSP00000454134.1Re-query CCDS DB by Nucleotide ID:ENST00000558984Re-query CCDS DB by Protein ID:ENSP00000454134
Original member Current member NCBI NM_001202.6 NP_001193.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001202.6Link to Protein Sequence:NP_001193.2Re-query CCDS DB by Nucleotide ID:NM_001202Re-query CCDS DB by Protein ID:NP_001193Link to BLAST:NP_001193.2
Original member Current member NCBI NM_001347914.2 NP_001334843.1 Accepted alive Link to Nucleotide Sequence:NM_001347914.2Link to Protein Sequence:NP_001334843.1Re-query CCDS DB by Nucleotide ID:NM_001347914Re-query CCDS DB by Protein ID:NP_001334843Link to BLAST:NP_001334843.1
Original member Current member NCBI NM_001347916.1 NP_001334845.1 Accepted alive Link to Nucleotide Sequence:NM_001347916.1Link to Protein Sequence:NP_001334845.1Re-query CCDS DB by Nucleotide ID:NM_001347916Re-query CCDS DB by Protein ID:NP_001334845Link to BLAST:NP_001334845.1
Original member Current member NCBI NM_130850.5 NP_570911.2 Accepted alive Link to Nucleotide Sequence:NM_130850.5Link to Protein Sequence:NP_570911.2Re-query CCDS DB by Nucleotide ID:NM_130850Re-query CCDS DB by Protein ID:NP_570911Link to BLAST:NP_570911.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001193.2 408 P12644 408 100% 0 0
NP_001334843.1 408 P12644 408 100% 0 0
NP_001334845.1 408 P12644 408 100% 0 0
NP_570911.2 408 P12644 408 100% 0 0

Chromosomal Locations for CCDS 9715.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 53950032 53950888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 53951853 53952222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1227 nt):
ATGATTCCTGGTAACCGAATGCTGATGGTCGTTTTATTATGCCAAGTCCTGCTAGGAGGCGCGAGCCATG
CTAGTTTGATACCTGAGACGGGGAAGAAAAAAGTCGCCGAGATTCAGGGCCACGCGGGAGGACGCCGCTC
AGGGCAGAGCCATGAGCTCCTGCGGGACTTCGAGGCGACACTTCTGCAGATGTTTGGGCTGCGCCGCCGC
CCGCAGCCTAGCAAGAGTGCCGTCATTCCGGACTACATGCGGGATCTTTACCGGCTTCAGTCTGGGGAGG
AGGAGGAAGAGCAGATCCACAGCACTGGTCTTGAGTATCCTGAGCGCCCGGCCAGCCGGGCCAACACCGT
GAGGAGCTTCCACCACGAAGAACATCTGGAGAACATCCCAGGGACCAGTGAAAACTCTGCTTTTCGTTTC
CTCTTTAACCTCAGCAGCATCCCTGAGAACGAGGTGATCTCCTCTGCAGAGCTTCGGCTCTTCCGGGAGC
AGGTGGACCAGGGCCCTGATTGGGAAAGGGGCTTCCACCGTATAAACATTTATGAGGTTATGAAGCCCCC
AGCAGAAGTGGTGCCTGGGCACCTCATCACACGACTACTGGACACGAGACTGGTCCACCACAATGTGACA
CGGTGGGAAACTTTTGATGTGAGCCCTGCGGTCCTTCGCTGGACCCGGGAGAAGCAGCCAAACTATGGGC
TAGCCATTGAGGTGACTCACCTCCATCAGACTCGGACCCACCAGGGCCAGCATGTCAGGATTAGCCGATC
GTTACCTCAAGGGAGTGGGAATTGGGCCCAGCTCCGGCCCCTCCTGGTCACCTTTGGCCATGATGGCCGG
GGCCATGCCTTGACCCGACGCCGGAGGGCCAAGCGTAGCCCTAAGCATCACTCACAGCGGGCCAGGAAGA
AGAATAAGAACTGCCGGCGCCACTCGCTCTATGTGGACTTCAGCGATGTGGGCTGGAATGACTGGATTGT
GGCCCCACCAGGCTACCAGGCCTTCTACTGCCATGGGGACTGCCCCTTTCCACTGGCTGACCACCTCAAC
TCAACCAACCATGCCATTGTGCAGACCCTGGTCAATTCTGTCAATTCCAGTATCCCCAAAGCCTGTTGTG
TGCCCACTGAACTGAGTGCCATCTCCATGCTGTACCTGGATGAGTATGATAAGGTGGTACTGAAAAATTA
TCAGGAGATGGTAGTAGAGGGATGTGGGTGCCGCTGA

Translation (408 aa):
MIPGNRMLMVVLLCQVLLGGASHASLIPETGKKKVAEIQGHAGGRRSGQSHELLRDFEATLLQMFGLRRR
PQPSKSAVIPDYMRDLYRLQSGEEEEEQIHSTGLEYPERPASRANTVRSFHHEEHLENIPGTSENSAFRF
LFNLSSIPENEVISSAELRLFREQVDQGPDWERGFHRINIYEVMKPPAEVVPGHLITRLLDTRLVHHNVT
RWETFDVSPAVLRWTREKQPNYGLAIEVTHLHQTRTHQGQHVRISRSLPQGSGNWAQLRPLLVTFGHDGR
GHALTRRRRAKRSPKHHSQRARKKNKNCRRHSLYVDFSDVGWNDWIVAPPGYQAFYCHGDCPFPLADHLN
STNHAIVQTLVNSVNSSIPKACCVPTELSAISMLYLDEYDKVVLKNYQEMVVEGCGCR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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