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Report for CCDS8640.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8640.1 Public Homo sapiens 12 TAS2R19 24 110 108 CCDS HistoryNCBI Gene:259294Re-query CCDS DB by CCDS ID:8640.1Re-query CCDS DB by GeneID:259294See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8640.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000390673.2 ENSP00000375091.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000390673.2Link to Ensembl Protein Viewer:ENSP00000375091.2Re-query CCDS DB by Nucleotide ID:ENST00000390673Re-query CCDS DB by Protein ID:ENSP00000375091
Original member Current member NCBI NM_176888.2 NP_795369.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_176888.2Link to Protein Sequence:NP_795369.1Re-query CCDS DB by Nucleotide ID:NM_176888Re-query CCDS DB by Protein ID:NP_795369Link to BLAST:NP_795369.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_795369.1 299 P59542 299 100% 0 0

Chromosomal Locations for CCDS 8640.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 11021672 11022571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (900 nt):
ATGATGTGTTTTCTGCTCATCATTTCATCAATTCTGGTAGTGTTTGCATTTGTTCTTGGAAATGTTGCCA
ATGGCTTCATAGCCCTAGTAAATGTCATTGACTGGGTTAACACACGAAAGATCTCCTCAGCTGAGCAAAT
TCTCACTGCTCTGGTGGTCTCCAGAATTGGTTTACTCTGGGTCATGTTATTCCTTTGGTATGCAACTGTG
TTTAATTCTGCTTTATATGGTTTAGAAGTAAGAATTGTTGCTTCTAATGCCTGGGCTGTAACGAACCATT
TCAGCATGTGGCTTGCTGCTAGCCTCAGCATATTTTGTTTGCTCAAGATTGCCAATTTCTCCAACCTTAT
TTCTCTCCACCTAAAGAAGAGAATTAAGAGTGTTGTTCTGGTGATACTGTTGGGGCCCTTGGTATTTCTG
ATTTGTAATCTTGCTGTGATAACCATGGATGAGAGAGTGTGGACAAAAGAATATGAAGGAAATGTGACTT
GGAAGATCAAATTGAGGAATGCAATACACCTTTCAAGCTTGACTGTAACTACTCTAGCAAACCTCATACC
CTTTACTCTGAGCCTAATATGTTTTCTGCTGTTAATCTGTTCTCTTTGTAAACATCTCAAGAAGATGCGG
CTCCATAGCAAAGGATCTCAAGATCCCAGCACCAAGGTCCATATAAAAGCTTTGCAAACTGTGACCTCCT
TCCTCATGTTATTTGCCATTTACTTTCTGTGTATAATCACATCAACTTGGAATCTTAGGACACAGCAGAG
CAAACTTGTACTCCTGCTTTGCCAAACTGTTGCAATCATGTATCCTTCATTCCACTCATTCATCCTGATT
ATGGGAAGTAGGAAGCTAAAACAGACCTTTCTTTCAGTTTTGTGGCAGATGACACGCTGA

Translation (299 aa):
MMCFLLIISSILVVFAFVLGNVANGFIALVNVIDWVNTRKISSAEQILTALVVSRIGLLWVMLFLWYATV
FNSALYGLEVRIVASNAWAVTNHFSMWLAASLSIFCLLKIANFSNLISLHLKKRIKSVVLVILLGPLVFL
ICNLAVITMDERVWTKEYEGNVTWKIKLRNAIHLSSLTVTTLANLIPFTLSLICFLLLICSLCKHLKKMR
LHSKGSQDPSTKVHIKALQTVTSFLMLFAIYFLCIITSTWNLRTQQSKLVLLLCQTVAIMYPSFHSFILI
MGSRKLKQTFLSVLWQMTR


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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