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Report for CCDS77262.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77262.1 Public Homo sapiens 19 MAP1S 24 110 108 CCDS HistoryNCBI Gene:55201Re-query CCDS DB by CCDS ID:77262.1Re-query CCDS DB by GeneID:55201See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77262.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000544059.2 ENSP00000439243.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544059.2Link to Ensembl Protein Viewer:ENSP00000439243.1Re-query CCDS DB by Nucleotide ID:ENST00000544059Re-query CCDS DB by Protein ID:ENSP00000439243
Original member Current member NCBI NM_001308363.2 NP_001295292.1 Accepted alive Link to Nucleotide Sequence:NM_001308363.2Link to Protein Sequence:NP_001295292.1Re-query CCDS DB by Nucleotide ID:NM_001308363Re-query CCDS DB by Protein ID:NP_001295292Link to BLAST:NP_001295292.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001295292.1 1033 Q66K74-2 1033 100% 0 0

Chromosomal Locations for CCDS 77262.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17720391 17720430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17720936 17721037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17724126 17724208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17725049 17725189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17725829 17728172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17733193 17733428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17734273 17734428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3102 nt):
ATGGCCGGGATGATAGACAGGTTCAGCCCTGCCAACACAGGCATCCGGTCTTGGGATGTCGATCCTGGCG
TCTGCAACCTTGATGAACAGCTCAAGGTCTTTGTGTCCCGACACTCTGCCACCTTCTCCAGCATTGTGAA
AGGCCAGCGGAGCCTGCACCACCGTGGAGACAACCTGGAGACCCTGGTCCTCCTGAACCCATCAGACAAG
TCCCTGTATGATGAGCTCCGGAACCTTCTGTTGGACCCTGCCTCTCACAAGCTACTGGTGTTGGCTGGGC
CCTGCCTGGAGGAGACGGGGGAGCTGCTGCTACAGACAGGGGGCTTCTCGCCTCACCACTTCCTCCAGGT
CCTGAAGGACAGAGAGATCCGGGACATCCTGGCCACCACGCCCCCACCTGTGCAGCCGCCCATACTCACC
ATCACCTGCCCCACCTTCGGTGACTGGGCTCAGCTGGCACCCGCTGTGCCTGGCCTTCAGGGGGCGCTCC
GGCTCCAGCTGCGGCTGAACCCCCCGGCGCAGCTGCCCAACTCTGAGGGCCTGTGCGAATTCCTGGAGTA
CGTGGCTGAGTCTCTGGAGCCACCGTCCCCCTTCGAGCTGCTGGAGCCCCCGACCTCCGGGGGCTTCCTC
AGGCTGGGCCGGCCCTGCTGCTACATCTTCCCTGGAGGCCTCGGGGATGCCGCCTTCTTCGCCGTCAATG
GCTTCACTGTGCTGGTCAACGGTGGCTCAAACCCCAAGTCCAGTTTCTGGAAGCTGGTGCGGCACCTGGA
CCGCGTGGATGCCGTGCTGGTGACCCACCCTGGCGCCGACAGCCTCCCCGGCCTCAACAGCCTGCTGCGG
CGCAAACTGGCGGAGCGCTCCGAGGTGGCTGCTGGTGGGGGCTCCTGGGACGACAGGCTGCGCAGGCTCA
TCTCCCCCAACCTGGGGGTCGTGTTCTTCAACGCCTGCGAGGCCGCGTCGCGGCTGGCGCGCGGCGAGGA
TGAGGCGGAGCTGGCGCTGAGCCTCCTGGCGCAGCTGGGCATCACGCCTCTGCCACTCAGCCGCGGCCCC
GTGCCAGCCAAACCCACCGTGCTCTTCGAGAAGATGGGCGTGGGCCGGCTGGACATGTATGTGCTGCACC
CGCCCTCCGCCGGCGCCGAGCGCACGCTGGCCTCTGTGTGCGCCCTGCTGGTGTGGCACCCCGCCGGCCC
CGGCGAGAAGGTGGTGCGCGTGCTGTTCCCCGGTTGCACCCCGCCCGCCTGCCTCCTGGACGGCCTGGTC
CGCCTGCAGCACTTGAGGTTCCTGCGAGAGCCCGTGGTGACGCCCCAGGACCTGGAGGGGCCGGGGCGAG
CCGAGAGCAAAGAGAGCGTGGGCTCCCGGGACAGCTCGAAGAGAGAGGGCCTCCTGGCCACCCACCCTAG
ACCTGGCCAGGAGCGCCCTGGGGTGGCCCGCAAGGAGCCAGCACGGGCTGAGGCCCCACGCAAGACTGAG
AAAGAAGCCAAGACCCCCCGGGAGTTGAAGAAAGACCCCAAACCGAGTGTCTCCCGGACCCAGCCGCGGG
AGGTGCGCCGGGCAGCCTCTTCTGTGCCCAACCTCAAGAAGACGAATGCCCAGGCGGCACCCAAGCCCCG
CAAAGCGCCCAGCACGTCCCACTCTGGCTTCCCGCCGGTGGCAAATGGACCCCGCAGCCCGCCCAGCCTC
CGATGTGGAGAAGCCAGCCCCCCCAGTGCAGCCTGCGGCTCTCCGGCCTCCCAGCTGGTGGCCACGCCCA
GCCTGGAGCTGGGGCCGATCCCAGCCGGGGAGGAGAAGGCACTGGAGCTGCCTTTGGCCGCCAGCTCAAT
CCCAAGGCCACGCACACCCTCCCCTGAGTCCCACCGGAGCCCCGCAGAGGGCAGCGAGCGGCTGTCGCTG
AGCCCACTGCGGGGCGGGGAGGCCGGGCCAGACGCCTCACCCACAGTGACCACACCCACGGTGACCACGC
CCTCACTACCCGCAGAGGTGGGCTCCCCGCACTCGACCGAGGTGGACGAGTCCCTGTCGGTGTCCTTTGA
GCAGGTGCTGCCGCCATCCGCCCCCACCAGTGAGGCTGGGCTGAGCCTCCCGCTGCGTGGCCCCCGGGCG
CGGCGCTCGGCTTCCCCACACGATGTGGACCTGTGCCTGGTGTCACCCTGTGAATTTGAGCATCGCAAGG
CGGTGCCAATGGCACCGGCACCTGCGTCCCCCGGCAGCTCGAATGACAGCAGTGCCCGGTCACAGGAACG
GGCAGGTGGGCTGGGGGCCGAGGAGACGCCACCCACATCGGTCAGCGAGTCCCTGCCCACCCTGTCTGAC
TCGGATCCCGTGCCCCTGGCCCCCGGTGCGGCAGACTCAGACGAAGACACAGAGGGCTTTGGAGTCCCTC
GCCACGACCCTTTGCCTGACCCCCTCAAGGTCCCCCCACCACTGCCTGACCCATCCAGCATCTGCATGGT
GGACCCCGAGATGCTGCCCCCCAAGACAGCACGGCAAACGGAGAACGTCAGCCGCACCCGGAAGCCCCTG
GCCCGCCCCAACTCACGCGCTGCCGCCCCCAAAGCCACTCCAGTGGCTGCTGCCAAAACCAAGGGGCTTG
CTGGTGGGGACCGTGCCAGCCGACCACTCAGTGCCCGGAGTGAGCCCAGTGAGAAGGGAGGCCGGGCACC
CCTGTCCAGAAAGTCCTCAACCCCCAAGACTGCCACTCGAGGCCCGTCGGGGTCAGCCAGCAGCCGGCCC
GGGGTGTCAGCCACCCCACCCAAGTCCCCGGTCTACCTGGACCTGGCCTACCTGCCCAGCGGGAGCAGCG
CCCACCTGGTGGATGAGGAGTTCTTCCAGCGCGTGCGCGCGCTCTGCTACGTCATCAGTGGCCAGGACCA
GCGCAAGGAGGAAGGCATGCGGGCCGTCCTGGACGCGCTACTGGCCAGCAAGCAGCATTGGGACCGTGAC
CTGCAGGTGACCCTGATCCCCACTTTCGACTCGGTGGCCATGCATACGTGGTACGCAGAGACGCACGCCC
GGCACCAGGCGCTGGGCATCACGGTGTTGGGCAGCAACAGCATGGTGTCCATGCAGGATGACGCCTTCCC
GGCCTGCAAGGTGGAGTTCTAG

Translation (1033 aa):
MAGMIDRFSPANTGIRSWDVDPGVCNLDEQLKVFVSRHSATFSSIVKGQRSLHHRGDNLETLVLLNPSDK
SLYDELRNLLLDPASHKLLVLAGPCLEETGELLLQTGGFSPHHFLQVLKDREIRDILATTPPPVQPPILT
ITCPTFGDWAQLAPAVPGLQGALRLQLRLNPPAQLPNSEGLCEFLEYVAESLEPPSPFELLEPPTSGGFL
RLGRPCCYIFPGGLGDAAFFAVNGFTVLVNGGSNPKSSFWKLVRHLDRVDAVLVTHPGADSLPGLNSLLR
RKLAERSEVAAGGGSWDDRLRRLISPNLGVVFFNACEAASRLARGEDEAELALSLLAQLGITPLPLSRGP
VPAKPTVLFEKMGVGRLDMYVLHPPSAGAERTLASVCALLVWHPAGPGEKVVRVLFPGCTPPACLLDGLV
RLQHLRFLREPVVTPQDLEGPGRAESKESVGSRDSSKREGLLATHPRPGQERPGVARKEPARAEAPRKTE
KEAKTPRELKKDPKPSVSRTQPREVRRAASSVPNLKKTNAQAAPKPRKAPSTSHSGFPPVANGPRSPPSL
RCGEASPPSAACGSPASQLVATPSLELGPIPAGEEKALELPLAASSIPRPRTPSPESHRSPAEGSERLSL
SPLRGGEAGPDASPTVTTPTVTTPSLPAEVGSPHSTEVDESLSVSFEQVLPPSAPTSEAGLSLPLRGPRA
RRSASPHDVDLCLVSPCEFEHRKAVPMAPAPASPGSSNDSSARSQERAGGLGAEETPPTSVSESLPTLSD
SDPVPLAPGAADSDEDTEGFGVPRHDPLPDPLKVPPPLPDPSSICMVDPEMLPPKTARQTENVSRTRKPL
ARPNSRAAAPKATPVAAAKTKGLAGGDRASRPLSARSEPSEKGGRAPLSRKSSTPKTATRGPSGSASSRP
GVSATPPKSPVYLDLAYLPSGSSAHLVDEEFFQRVRALCYVISGQDQRKEEGMRAVLDALLASKQHWDRD
LQVTLIPTFDSVAMHTWYAETHARHQALGITVLGSNSMVSMQDDAFPACKVEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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