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Report for CCDS63175.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63175.1 Public Homo sapiens 2 UBE2F 24 110 108 CCDS HistoryNCBI Gene:140739Re-query CCDS DB by CCDS ID:63175.1Re-query CCDS DB by GeneID:140739See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63175.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409953.5 ENSP00000386680.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409953.5Link to Ensembl Protein Viewer:ENSP00000386680.1Re-query CCDS DB by Nucleotide ID:ENST00000409953Re-query CCDS DB by Protein ID:ENSP00000386680
Original member Current member NCBI NM_001278306.2 NP_001265235.1 Accepted alive Link to Nucleotide Sequence:NM_001278306.2Link to Protein Sequence:NP_001265235.1Re-query CCDS DB by Nucleotide ID:NM_001278306Re-query CCDS DB by Protein ID:NP_001265235Link to BLAST:NP_001265235.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265235.1 161 Q969M7-7 161 100% 0 0

Chromosomal Locations for CCDS 63175.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 237967087 237967132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 237987963 237987992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 237994744 237994809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 238016566 238016633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 238025342 238025412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 238030556 238030613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 238032222 238032254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 238035878 238035940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 238041288 238041338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (486 nt):
ATGGTGTTGGGCGCCGGGCCCGCCTCGCCTGTCTCGGGGAGCCCAGAGGTTGCAGAACTTGAAGCTAATT
TACCTTGTACATGTAAAGTGCATTTTCCTGATCCAAACAAGCTTCATTGTTTTCAGCTAACAGTAACCCC
AGATGAGGGTTACTACCAGGGTGGAAAATTTCAGTTTGAAACTGAAGTTCCCGATGCGTACAACATGGTG
CCTCCCAAAGTGAAATGCCTGACCAAGATCTGGCACCCCAACATCACAGAGACAGGGGAAATATGTCTGA
GTTTATTGAGAGAACATTCAATTGATGGCACTGGCTGGGCTCCCACAAGAACATTAAAGGATGTCGTTTG
GGGATTAAACTCTTTGTTTACTGATCTTTTGAATTTTGATGATCCACTGAATATTGAAGCTGCAGAACAT
CATTTGCGGGACAAGGAGGACTTCCGGAATAAAGTGGATGACTACATCAAACGTTATGCCAGATGA

Translation (161 aa):
MVLGAGPASPVSGSPEVAELEANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMV
PPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEH
HLRDKEDFRNKVDDYIKRYAR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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