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Report for CCDS56334.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56334.1 Public Homo sapiens 4 ODAPH 24 110 108 CCDS HistoryNCBI Gene:152816Re-query CCDS DB by CCDS ID:56334.1Re-query CCDS DB by GeneID:152816See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56334.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000435974.2 ENSP00000406925.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000435974.2Link to Ensembl Protein Viewer:ENSP00000406925.2Re-query CCDS DB by Nucleotide ID:ENST00000435974Re-query CCDS DB by Protein ID:ENSP00000406925
Original member Current member NCBI NM_001206981.2 NP_001193910.1 Accepted alive Link to Nucleotide Sequence:NM_001206981.2Link to Protein Sequence:NP_001193910.1Re-query CCDS DB by Nucleotide ID:NM_001206981Re-query CCDS DB by Protein ID:NP_001193910Link to BLAST:NP_001193910.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001193910.1 176 Q17RF5-2 176 100% 0 0

Chromosomal Locations for CCDS 56334.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 75556083 75556149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75556541 75556584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 75564114 75564533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGGCTCGCAGACACTGCTTCTCCTACTGGTTACTGGTATGCTGGTTGGTGGTAACTGTGGCAGAAGCAC
TGTCCACTTTCTATCTCCAGCAGCATATTAATTTGCACATGGACAAGAAGAGGTATTTACGCCTCCTGGA
GATTCACAAAATAATGCGGACGCTACCGACTGCCAGATCTTTACACTCACCCCTCCACCTGCCCCGAGGA
GTCCGGTCACAAGGGCCCAGCCCATCACAAAGACACCCAGGTGTCCCTTCCATTTTTTTCCACGAAGGCC
CAGAATCCATTTTAGGTTTCCAAACAGACCTTTCGTCCCTTCAAGGTGTAACCACCGTTTTCCATTCCAG
CCATTTTATTGGCCACACCGTTACCTTACTTATAGGTATTTCCCCAGAAGAAGACTCCAGAGAGGAAGCT
CATCTGAGGAAAGCTGAGAGGGAAGAGAAACCCAAACATACTGAAGCAAAAAAAAGCCTATCCTTCAGAA
AAAAGCAACAAAAAGATTTCTGTTTTATCTTTCGAAACTAA

Translation (176 aa):
MARRHCFSYWLLVCWLVVTVAEALSTFYLQQHINLHMDKKRYLRLLEIHKIMRTLPTARSLHSPLHLPRG
VRSQGPSPSQRHPGVPSIFFHEGPESILGFQTDLSSLQGVTTVFHSSHFIGHTVTLLIGISPEEDSREEA
HLRKAEREEKPKHTEAKKSLSFRKKQQKDFCFIFRN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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