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Report for CCDS50716.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50716.1 Public Mus musculus 2 Adam33 23 108 98 CCDS HistoryNCBI Gene:110751Re-query CCDS DB by CCDS ID:50716.1Re-query CCDS DB by GeneID:110751See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50716.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052104.9 ENSMUSP00000052486.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052104.9Link to Ensembl Protein Viewer:ENSMUSP00000052486.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000052104Re-query CCDS DB by Protein ID:ENSMUSP00000052486
Original member Current member NCBI NM_001163529.2 NP_001157001.1 Accepted alive Link to Nucleotide Sequence:NM_001163529.2Link to Protein Sequence:NP_001157001.1Re-query CCDS DB by Nucleotide ID:NM_001163529Re-query CCDS DB by Protein ID:NP_001157001Link to BLAST:NP_001157001.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157001.1 771 Q923W9-2 771 100% 0 0

Chromosomal Locations for CCDS 50716.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 131051288 131051370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131051480 131051550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131052818 131052962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131053042 131053150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131053390 131053588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131053685 131053793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131053918 131054113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131054272 131054361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131054474 131054651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131055062 131055204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131055281 131055365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131055496 131055662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131055756 131055827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131055914 131055979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131056190 131056379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131056465 131056541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131056714 131056792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131058662 131058738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131061143 131061222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131063415 131063514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2316 nt):
ATGGGCTCGAGGTGCGGGAGACCCGGGGGGTCTCCGGTGCTGCTATTGCTGCCGCTGTTGCTGCCCTCGT
GTCCGCTGCGGAGCGCTCGGATGTTTCCAGGAAATGCCCATGGAGAGCTAGTCACTCCCCACTGGATCCT
GGAGGGCAGACTCTGGCTCAAGGTCACCCTGGAGGAGCCGATCTTGAAGCCTGACTCGGTGCTGGTGGCT
TTAGAGGCTGAAGGCCAGGATCTCCTGCTTGAACTGGAGAAGAAGCACAAGCTTCTGGCCCCAGGATACA
CAGAAACCCACTACAGGCCAGATGGGCATCCGGTAGTGCTGTCCCCCAACCACACGGATCATTGCCAATA
TCACGGGCGTGTGAGGGGCTTCCGGGAATCCTGGGTGGTTCTCAGCACCTGCTCTGGGATGAGTGGCCTT
ATTGTGCTCAGCAGCAAAGTCAGCTATTATCTGCAACCTCGGACTCCTGGGGATACCAAAGACTTCCCAA
CCCACGAGATCTTCCGGATGGAGCAGTTGTTCACCTGGAGAGGGGTCCAGAGAGACAAGAACTCCCAATA
CAAAGCAGGAATGGCCAGTCTTCCTCATGTCCCCCAGAGCCGGGTGAGGCGAGAGGCGCGCAGGAGTCCC
AGGTACCTGGAACTGTACATAGTGGCTGACCACACCCTGTTCTTGCTTCAGCATCAGAACTTGAACCACA
CGAGACAGCGCCTCCTGGAGGTTGCCAATTGCGTGGACCAGATTCTCAGGACTCTGGATATACAGTTGGT
GTTGACCGGGCTGGAAGTGTGGACCGAGCAGGATCTCAGTCGCATCACTCAGGACGCAAACGAAACGCTC
TGGGCTTTCCTACAGTGGCGCCGCGGGGTGTGGGCCAGGAGACCACACGACTCCACACAACTGCTCACGG
GCCGCACCTTCCAGGGTACCACGGTGGGCCTGGCACCTGTGGAGGGCATATGCCGCGCGGAGAGCTCCGG
AGGTGTGAGCACAGACCACTCGGAACTCCCCATCGGCACAGCAGCCACCATGGCCCACGAGATAGGCCAC
AGCCTGGGCCTCCACCATGATCCCGAGGGCTGCTGCGTGCAGGCCGATGCAGAGCAAGGAGGCTGCGTCA
TGGAGGCAGCCACAGGGCACCCTTTCCCGCGCGTCTTCAGCGCCTGCAGCCGCCGCCAGCTGCGCACCTT
CTTCCGCAAAGGGGGCGGTCCTTGCCTCTCCAACACCTCGGCGCCGGGGCTCCTGGTGCTGCCCAGCCGC
TGCGGAAACGGCTTCTTGGAAGCAGGAGAAGAGTGCGACTGCGGTTCTGGCCAGAAGTGCCCAGACCCCT
GCTGCTTTGCCCACAATTGCTCCCTGCGTGCGGGGGCTCAATGTGCCCACGGTGATTGCTGTGCGAGGTG
CCTGTTAAAGTCCGCGGGCACGCCTTGTCGTCCTGCTGCGACTGACTGCGATCTCCCCGAGTTCTGCACC
GGCACCTCCCCGTATTGCCCCGCAGATGTTTACCTACTGGATGGCTCACCCTGCGCTGAGGGTCGCGGCT
ATTGCCTAGACGGCTGGTGTCCCACGCTGGAGCAGCAGTGCCAGCAGCTATGGGGGCCTGGGTCCAAGCC
GGCCCCAGAGCCATGTTTCCAGCAGATGAACTCCATGGGGAATTCGCAAGGGAACTGTGGCCAGGACCAC
AAGGGTAGCTTCCTGCCTTGTGCTCAGAGGGACGCTCTGTGTGGGAAACTGCTGTGCCAGGGAGGGGAGC
CGAACCCACTAGTGCCGCACATAGTGACTATGGACTCCACAATTCTCCTAGAGGGCCGCGAAGTGGTTTG
CCGAGGGGCCTTTGTGCTCCCAGATAGTCACCTGGACCAGCTTGACTTGGGTCTGGTAGAGCCAGGCACC
GGCTGTGGACCTAGAATGGTTTGCAATAGCAATCGTAACTGTCACTGTGCTGCTGGCTGGGCTCCACCCT
TCTGTGACAAGCCTGGCTTGGGTGGTAGCGTGGATAGTGGCCCTGCACAGTCTGCAAACCGAGATGCCTT
CCCCTTGGCCATGCTCCTCAGCTTCCTGCTGCCTCTGCTCCCTGGGGCTGGCCTAGCCTGGTGCTACTAC
CAGCTCCCAACATTCTGTCATCGAAGGGGACTGTGCTGCAGGAGGGACCCCCTATGGAATAGAGACATAC
CCCTGGGCAGTGTGCATCCGGTGGAGTTTGGCTCCATCATCACTGGAGAGCCCTCGCCCCCTCCCCCATG
GACCTCTTGCCAACAGCGTTCGCACCCTCCATCTCTTGACTTGCTCTCAGACCCTGCGAACTCTGAGCTT
ACCTAA

Translation (771 aa):
MGSRCGRPGGSPVLLLLPLLLPSCPLRSARMFPGNAHGELVTPHWILEGRLWLKVTLEEPILKPDSVLVA
LEAEGQDLLLELEKKHKLLAPGYTETHYRPDGHPVVLSPNHTDHCQYHGRVRGFRESWVVLSTCSGMSGL
IVLSSKVSYYLQPRTPGDTKDFPTHEIFRMEQLFTWRGVQRDKNSQYKAGMASLPHVPQSRVRREARRSP
RYLELYIVADHTLFLLQHQNLNHTRQRLLEVANCVDQILRTLDIQLVLTGLEVWTEQDLSRITQDANETL
WAFLQWRRGVWARRPHDSTQLLTGRTFQGTTVGLAPVEGICRAESSGGVSTDHSELPIGTAATMAHEIGH
SLGLHHDPEGCCVQADAEQGGCVMEAATGHPFPRVFSACSRRQLRTFFRKGGGPCLSNTSAPGLLVLPSR
CGNGFLEAGEECDCGSGQKCPDPCCFAHNCSLRAGAQCAHGDCCARCLLKSAGTPCRPAATDCDLPEFCT
GTSPYCPADVYLLDGSPCAEGRGYCLDGWCPTLEQQCQQLWGPGSKPAPEPCFQQMNSMGNSQGNCGQDH
KGSFLPCAQRDALCGKLLCQGGEPNPLVPHIVTMDSTILLEGREVVCRGAFVLPDSHLDQLDLGLVEPGT
GCGPRMVCNSNRNCHCAAGWAPPFCDKPGLGGSVDSGPAQSANRDAFPLAMLLSFLLPLLPGAGLAWCYY
QLPTFCHRRGLCCRRDPLWNRDIPLGSVHPVEFGSIITGEPSPPPPWTSCQQRSHPPSLDLLSDPANSEL
T


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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