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Report for CCDS5042.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5042.1 Public Homo sapiens 6 COQ3 24 110 108 CCDS HistoryNCBI Gene:51805Re-query CCDS DB by CCDS ID:5042.1Re-query CCDS DB by GeneID:51805See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5042.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254759.8 ENSP00000254759.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000254759.8Link to Ensembl Protein Viewer:ENSP00000254759.3Re-query CCDS DB by Nucleotide ID:ENST00000254759Re-query CCDS DB by Protein ID:ENSP00000254759
Original member Current member NCBI NM_017421.4 NP_059117.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017421.4Link to Protein Sequence:NP_059117.3Re-query CCDS DB by Nucleotide ID:NM_017421Re-query CCDS DB by Protein ID:NP_059117Link to BLAST:NP_059117.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_059117.3 369 Q9NZJ6 369 100% 0 0

Chromosomal Locations for CCDS 5042.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 99369600 99369820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 99371428 99371587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 99375940 99376182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 99377386 99377485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 99380189 99380341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 99383698 99383824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 99394074 99394179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1110 nt):
ATGTGGAGTGGCCGTAAGCTGGGCTCCTCCGGGGGTTGGTTTTTAAGAGTGCTGGGGCCTGGAGGCTGTA
ATACAAAAGCTGCGCGTCCCTTAATTTCCTCGGCGGTTTATGTGAAGAACCAGCTCAGTGGGACTCTACA
GATTAAACCAGGGGTTTTCAATGAATACAGAACCATATGGTTCAAATCCTACAGGACGATCTTTTCCTGT
TTGAACAGAATAAAGAGTTTCAGGTACCCTTGGGCGAGACTGTACAGTACTTCCCAAACCACTGTCGACA
GCGGTGAGGTAAAAACCTTCTTGGCCCTGGCTCACAAATGGTGGGATGAACAAGGAGTATATGCACCTCT
TCATTCCATGAATGACCTGAGGGTGCCATTTATTAGGGACAATCTTCTGAAAACAATTCCTAATCACCAG
CCAGGAAAACCTTTGTTGGGGATGAAGATTCTTGACGTTGGCTGTGGTGGTGGGCTGTTAACTGAACCTC
TAGGGCGGCTTGGGGCTTCAGTTATTGGAATCGACCCTGTGGATGAGAACATTAAAACAGCACAATGCCA
TAAATCATTTGATCCAGTCCTGGATAAGAGAATAGAGTACAGAGTGTGTTCCCTGGAAGAGATTGTGGAA
GAGACTGCAGAAACATTTGATGCTGTTGTAGCTTCTGAAGTTGTAGAACATGTGATTGATCTAGAAACAT
TTTTACAGTGCTGCTGTCAAGTGTTAAAACCCGGTGGTTCTTTATTCATTACTACAATCAACAAAACACA
ACTTTCCTATGCCTTGGGAATTGTTTTTTCAGAGCAAATTGCAAGTATTGTACCAAAAGGTACTCATACA
TGGGAGAAGTTTGTTTCACCTGAAACACTAGAGAGCATTCTGGAATCAAATGGTCTGTCAGTTCAAACAG
TGGTAGGAATGCTCTATAACCCCTTCTCAGGTTACTGGCATTGGAGTGAAAATACCAGCCTTAACTATGC
AGCTTATGCTGTGAAATCCAGGGTCCAGGAACACCCAGCCTCTGCTGAGTTTGTTTTAAAGGGAGAAACA
GAAGAGCTCCAAGCTAATGCCTGCACCAATCCAGCTGTGCATGAAAAGCTGAAGAAATGA

Translation (369 aa):
MWSGRKLGSSGGWFLRVLGPGGCNTKAARPLISSAVYVKNQLSGTLQIKPGVFNEYRTIWFKSYRTIFSC
LNRIKSFRYPWARLYSTSQTTVDSGEVKTFLALAHKWWDEQGVYAPLHSMNDLRVPFIRDNLLKTIPNHQ
PGKPLLGMKILDVGCGGGLLTEPLGRLGASVIGIDPVDENIKTAQCHKSFDPVLDKRIEYRVCSLEEIVE
ETAETFDAVVASEVVEHVIDLETFLQCCCQVLKPGGSLFITTINKTQLSYALGIVFSEQIASIVPKGTHT
WEKFVSPETLESILESNGLSVQTVVGMLYNPFSGYWHWSENTSLNYAAYAVKSRVQEHPASAEFVLKGET
EELQANACTNPAVHEKLKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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