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Report for CCDS49186.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49186.1 Public Mus musculus 12 Kif26a 23 108 98 CCDS HistoryNCBI Gene:668303Re-query CCDS DB by CCDS ID:49186.1Re-query CCDS DB by GeneID:668303See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49186.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000128402.2 ENSMUSP00000119482.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000128402.2Link to Ensembl Protein Viewer:ENSMUSP00000119482.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000128402Re-query CCDS DB by Protein ID:ENSMUSP00000119482
Original member Current member NCBI NM_001097621.1 NP_001091090.1 Accepted alive Link to Nucleotide Sequence:NM_001097621.1Link to Protein Sequence:NP_001091090.1Re-query CCDS DB by Nucleotide ID:NM_001097621Re-query CCDS DB by Protein ID:NP_001091090Link to BLAST:NP_001091090.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001091090.1 1881 Q52KG5 1881 100% 0 0

Chromosomal Locations for CCDS 49186.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 112146365 112146406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112146714 112146956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112157248 112157673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112163351 112163541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112168768 112168957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112172571 112172783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112173341 112173434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112173738 112174000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112174101 112174284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112174435 112174597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112174774 112174936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112175486 112178399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112179143 112179348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112179480 112179500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112179795 112179945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112180451 112180632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5646 nt):
ATGGTCGGCCGCGGCGCCTCCTTGTGTGCGGTGCAGCCCGCGGTGGCTGAGTGCGGCCCGGCTCGAGAGA
CCCCGCCACTTGAGGTATCCCCGCGCAAGAGGCTGCCCGCCGGGCTCGATCAAGACCCATGCAGCAGCCG
CCCTGCTCCGGAGGGCGCCGGGGCCAGCGCTGAGCAGAGCCACTCGGCCGGTGGGGGCGGGTGGTGCCGC
CACTGCCACACGAAGCTCGTGGAGCTAAAACGACAGGCGTGGAAGTTGGTCAGCGGGCCCGGGACTCCTC
TCCGGGATCCTTGCCTCTCTACCTTGCTGCTTGACAAGCTCCCGGCCTCTGGGGTTCAGCCGGCATGCCG
CCCTGACACCGAGAGCCGCTGTGACGTATGTACCACGCATCTGCACCAGCTCACTCGGGAAGCCCTGCGC
CTGTTACAGACACCTGCCAGTCACGAGGACCCCAATGCTTCCCGAGGAGGCCTTGCGGCTCCCAGCTCCA
GGGACCCACCTGGACCCGTGGGCCTCATGGGGAGGCAGCCCCCTGTGGGACCTGACAGGAGGAAGGCAAC
GGCTTGGCCACCTGGCCCCAGCGTCCAGGTGTCGGTGGCACCAGCAGGCCTTGGGGGAGCATTGAGTACA
GTCACCATCCAGGCCCAGCAGTGCTTGGAGGGTGTGTGGAGCCTCTCAAGGGTCAACAGCTTCTTGCCAC
CCACTTGCCTGGCTGAGGCAGCTGTAGCTGCGGTGGCTGTGGCCGACACTGTCCGAGACTGTGCTCCAGC
AGCAGGCCCTGAACGTATGTCGAAGGCGTGGGGCCGAGGGGCAGCATGCACTACAGCCCTGGTTACCCCA
GCCCCAGGCACCTCAGCAGGGGGTTCCACAGGCCCGTCTGCAGCGGCCTCTTTCTTTATAAGGGCTGCCC
AGAAGCTCAGCCTGGCCTCCAAGCGCAAGAAGCATCACCCGCCGCCTGCGCCCTCCACCCGAGGCACATC
CACTTACCCCACCGACTTCAGTGGCTCTCTGCAGCTGTGGCCGCCCCCGGTGCCCCCCTGCCTGCTCAGG
GCTGCCTCCAAGGCCAAGGAAAACCCCAGCAGCTTCGGAAAGGTGAAGGTTATGCTGCGCATATGGCCGG
CACAAGGAGTCCAGCGCTCAGCCGAGTCCACATCCTTCCTGAAGGTGGATTCTCGCAAGAAGCAGGTGAC
TCTCTATGACCCCGCTGCCGGGCCTCCAGGCTGTGCAGGACTCCGGCACGCCCCCACCGCACCAGTCCCC
AAGATGTTTGCTTTTGATGCCATCTTCCCCCAGGACTCGGAGCAGGCTGAGGTCTGCTCAGGGACAGTGG
CTGACGTGCTCCAGTCTGTGGTCAGTGGAGCTGATGGCTGCATTTTTTCCTTTGGCCACATGAGCCTCGG
CAAATCATACACCATGATTGGGAAGGACAGCTCACCCCAGAGCCTGGGCATCGTGCCCTGTGCTATCTCC
TGGCTCTTCAGGCTTATTGACGAACGCAAGGAGAGGCTGGGCACGCGCTTCTCCATCCGCGTGTCTGCCG
TGGAAGTGTGCGGCCACGACCAGAGTCTGCGGGACCTGCTTGCCGAGGTGGCTTCAGGCAGCCTTCAGGA
CACCCAATCTCCGGGCGTGTACCTCCGGGAGGACCCTGTGTGTGGGACACAGCTCCAGAACCAGAACGAG
CTGCGTGCACCCACAGCAGAGAAGGCGGCCTTCTACCTGGACGCGGCCCTGGCAGCCCGCAGCACCAGCC
GTGCCGGCTGCGGGGAGGAAGCCCGGCGAAGCTCCCATATGCTCTTCACCCTGCACGTGTACCAGTACCG
TGTGGAGAAGTGTGGCCAAGGAGGAATGTCTGGAGGTCGTAGCCGCCTGCACCTGATCGACCTGGGCAGC
TGCGACGCAGCCGTCGGCAGAGGAGGAGAAGCCTCAGGGGGACCCCTCTGTCTGTCTCTGTCAGCTCTGG
GCAGTGTCATTCTGGCCCTGGTCAACGGGGCCAAGCATGTGCCCTACAGGGACCACAGACTCACCATGTT
ACTGCGGGAGTCCCTGGCTACCACCAATTGCCGCACCACTATGATCGCGCACATCTCAGACTCTCCAGCT
CACCACGCAGAGACACTCAGCACGGTGCAGCTGGCTGCCCGCATCCACCGCCTGCGCAGGAAGAAGGGCA
AGCATGCATCCAGTTCCTCAGGAGGAGAGAGCTCCTGTGAGGAGGGCCGAGCCCGCCGTCCCCCACACCT
TCGGCCCTTCCACCCACGGGCCGTGGTGTTGGACCCCGACCGCTCGGCTCCTGGCCTGTCCGGAGACCCC
GATTACTCATCCAGCAGTGAGCAGTCCTGCGACACGGTCATCTATGTGGGTCCCGGTGGGATGGCACTGT
CAGACCGTGAGCTCACGGACAACGAGGGCCCACCTGACTTCGTGCCCATCATCCCCGCTCTGAGCCGACG
CAGGCCCTCCGAGGGGCCCCGGGACGCTGACCACTTCCGCTGCAGTACGTTCGCCGAGCTGCAGGAGCGT
CTGGAGTGCATAGATGGCAGCGAGGCATTCCCTGGCCCCCAGGGTGGCTCTGACGGAGCCCAAGCCAGCC
CTGCCCGGGGAGGCAGGAAACCCTCGTTACCTGAGGCCACACCCTCCAGGAAGGCTGTGGCCCCCACAGT
GGTCACCAGTTGCCCTCGAGGCAGCCCTGGGCACGATACTCACCGGAGCGCCTCAGACCCCTCTAAGACT
GGTACACAGAGTGAGCAGAGAGTAGATGGTTCCCGGCCTGAGCCACCTGCTTCAGACAAGACCTCAGGAG
GCGGGGGCAGGAGGCCACTGCCCAGTCCAGCCCCTCCACCGCCTCGCCAGCCGGAAGCTCAAGGCATCCC
CAAAGAACCTGGGGGAGAGGGTACTGACAGCGTGCTGCGGACACCCCCAGTGGGCATGAGTGGACAGGCG
GCCTTGCCCCCGTTGCTCTCAGACTCGGCTTATCTCTCCCCGTCGGCTCGTGGACGCCATCTGGAGAGAG
GCCTGCTGACCACCACGGTGACCTTGCAGCAACCGGTGGAACTCAATGGCGAGGATGAGTTGGTGTTCAC
GGTGGTAGAGGAGCTACCTCTGGGCGGACTTGCAGGGGCCACACGGCCCTCCAGTCTGGCCAGCATGAGC
AGCGACTGCTCCCTGCAGGCTTTGGCTTCAGGGTCCAGGCCAGTCAGTATCATCAGTAGCATCAATGACG
AGTTTGATGCTTATACCTCACAGATGTCTGAGGGTCCCGGAGACCCCGGGGAGTTCCCAGAGGGAACAGC
GTGGGCTGGCGGCAGTCCAGCCTCCTCCATTGGCTCTTGGCTGAGCGACGTTGGTGTCTGCTTGTCTGAA
AGCCGTGGTCCCACACCACAGCCTCCCTTCAGCCCCAACTCTGCAGCAGGGCCAGGTCCACCAGAGTTTC
CTACCCCAGGCAGCTCCCTAGAGGAAAGCAAGGTCAGGTCCTCAGAGTGTGGAAGACCAGACAATCCCGG
CTCAGCCCGGAGTCTCCACCCTGGAGAAGCAGTTGCAACAACTCAGACCCAACCTGGCAGAGAGCCTTGG
GCCAGGTCCCCGCATGAGGTAGCCTCAGCCCAGACTATCCACTCCAGCCTGCCTCGGAAACCCAGGACTA
CCTCCACAGCCAGCCGAGCTCGTCCTAGCCGGGGACCATACAGCCCTGGTGGCCTGTTTGAGGACCCTTG
GCTGCTCCGGGCAGAGGACTGTGACACGCGCCAGATAGCCTCTACGGGCAGAGCCCCAAGCCCAACCCCA
GGCTCCCCTCGATTGCCTGAGACTCAGATGATGCTGGCTTGTGCCCAGAGAGTGGTAGATGGGTGTGAGG
TGGCATCCAGAATGTCGCGGAGACCAGAGGCTGTGGCTCGGATCCCACCTTTGCGGAGGGGGGCCACCAC
ACTAGGAGTGACCACACCTGCTGCATCCTGTGGGGACGCTCCAGCAGAGGCAGTGGTCCATTCAGGAAGC
CTGAAGACCACCTCGGGCAGTAAGAAGAGTGTTTCTCCCAAGGGGGCCTTCTTTCCAAGGCCTAGTGGGG
CAGGGCCTCCAGCCCCACCTGTGCGCAAGTCGAGCCTGGAGCAGAGCACGGCCCTCACCCCCACCCAGGC
CCTGGGACTGACCAGGGCAGGGGCTCCTTCTGCCTTCCGAGGGGAGGAGGAAGCCAGGCCTAGTGGTCGG
TCTGATTCCTCTGTTCCCAAGGCCACATCCAGCCTGAAAGCCCGAGCTGGCAAGATGGACGTGCCATACC
GTCCCTCTGGCCACATGTCCCTGGAACGGTGTGAGGGCCTGGCACATGGCAGCAGTAAGGTCAGAGATGT
CGTAGGACGGCCACCAAGGGCTGTGCCCAGGTTGGGTGTACCATCCGCCAGCCCTCCACTTGGACCAGCT
CCTGCCTGTAGGAACAGCCCAGCCAAGGGTGTTGGAGCAACCAAGCCTCCTGCTGGTGGAGCTAAGGGTC
GTAATCTGGGGCCAAGTACATCTCGGGCTCTGGGTGCTCCGGTGAAGCCACTAGGGCCTGTGGCAGGCAA
GACAGCTGGTGGCGCTGTGCCAGGACCCCGAGCTGCTCCACGGGCTGTGCCGGGTATTGGGGCCAAGGCC
GGTCGGGGCACCATCATGGGCACTAAGCAGGCATTTCGGGCTGCCCATAGCCGTGTCCACGAATTGGCAG
CCAGTGGATCTCCTAGTAGAGGTGGCCTCTCCTGGGGCTCGACGGACTCGGACAGCGGCAACGACAGCGG
TGTGAACCTGGCTGAAGAGCGGCAGCCCTCGAGCCCTGCCCTGCCCTCCCCTTACAGCAAAGTGACCGCT
CCGAGGAGACCCCAGCGCTACAGCAGTGGCCATGGCAGTGACAACAGCAGCGTGCTGAGCGGCGAGCTGC
CCCCCGCCATGGGCCGCACTGCTCTTTTCTACCACAGTGGCGGCAGCAGTGGCTACGAGAGCATGATTCG
GGACAGCGAGGCCACTGGCAGTGCCTCCTCAGCTCCAGACTCCATGAGTGAGAGTGGAACGGCCTCCCTG
GGTGCCCGCTCCCGCAGCCTCAAGTCCCCGAAGAAGAGAGCCACAGGTCTACAGCGGAGGAGGCTGATCC
CGGCCCCACTTCCTGACGCTGCTGCTTTAGGCCGCAAGCCCAGCCTCCCCGGGCAATGGGTGGACTTGCC
CCCGCCCCTGGCCGGCTCTCTGAAGGAGCCTTTTGAGATCAAGGTGTACGAAATAGATGACGTGGAGCGT
CTGCAGCGGCACCGGCTGCCTCTGAGGGAGAATGAAGCCAAGCCCTCCCAGGACGCAGAGAAGGGCCCAG
TGTGCATCAGCTCCAAGCTGCGTCTCGCAGAGCGCAGGCAGCAGCGACTGCAGGAAGTGCAGGCCAAACG
TGACCACCTCTGCGAGGAGCTGGCTGAGACCCAGGGCCGGCTGATGGTGGAACCTGGGCGCTGGCTAGAG
CAGTTTGAGGTGGACCCAGAGCTGGAGCCAGAGTCAGCTGAATATCTGGTGGCCCTGGAGCAAGCCACAG
CTGCCCTGGAGCAGTGCGTTAACCTGTGCAAGGCCCATGTCATGATGGTCACCTGCTTTGACATTGGAGT
TGCTGCCACCACTGCTGTACCTGGGCCACAAGAGGTGGATGTTTGA

Translation (1881 aa):
MVGRGASLCAVQPAVAECGPARETPPLEVSPRKRLPAGLDQDPCSSRPAPEGAGASAEQSHSAGGGGWCR
HCHTKLVELKRQAWKLVSGPGTPLRDPCLSTLLLDKLPASGVQPACRPDTESRCDVCTTHLHQLTREALR
LLQTPASHEDPNASRGGLAAPSSRDPPGPVGLMGRQPPVGPDRRKATAWPPGPSVQVSVAPAGLGGALST
VTIQAQQCLEGVWSLSRVNSFLPPTCLAEAAVAAVAVADTVRDCAPAAGPERMSKAWGRGAACTTALVTP
APGTSAGGSTGPSAAASFFIRAAQKLSLASKRKKHHPPPAPSTRGTSTYPTDFSGSLQLWPPPVPPCLLR
AASKAKENPSSFGKVKVMLRIWPAQGVQRSAESTSFLKVDSRKKQVTLYDPAAGPPGCAGLRHAPTAPVP
KMFAFDAIFPQDSEQAEVCSGTVADVLQSVVSGADGCIFSFGHMSLGKSYTMIGKDSSPQSLGIVPCAIS
WLFRLIDERKERLGTRFSIRVSAVEVCGHDQSLRDLLAEVASGSLQDTQSPGVYLREDPVCGTQLQNQNE
LRAPTAEKAAFYLDAALAARSTSRAGCGEEARRSSHMLFTLHVYQYRVEKCGQGGMSGGRSRLHLIDLGS
CDAAVGRGGEASGGPLCLSLSALGSVILALVNGAKHVPYRDHRLTMLLRESLATTNCRTTMIAHISDSPA
HHAETLSTVQLAARIHRLRRKKGKHASSSSGGESSCEEGRARRPPHLRPFHPRAVVLDPDRSAPGLSGDP
DYSSSSEQSCDTVIYVGPGGMALSDRELTDNEGPPDFVPIIPALSRRRPSEGPRDADHFRCSTFAELQER
LECIDGSEAFPGPQGGSDGAQASPARGGRKPSLPEATPSRKAVAPTVVTSCPRGSPGHDTHRSASDPSKT
GTQSEQRVDGSRPEPPASDKTSGGGGRRPLPSPAPPPPRQPEAQGIPKEPGGEGTDSVLRTPPVGMSGQA
ALPPLLSDSAYLSPSARGRHLERGLLTTTVTLQQPVELNGEDELVFTVVEELPLGGLAGATRPSSLASMS
SDCSLQALASGSRPVSIISSINDEFDAYTSQMSEGPGDPGEFPEGTAWAGGSPASSIGSWLSDVGVCLSE
SRGPTPQPPFSPNSAAGPGPPEFPTPGSSLEESKVRSSECGRPDNPGSARSLHPGEAVATTQTQPGREPW
ARSPHEVASAQTIHSSLPRKPRTTSTASRARPSRGPYSPGGLFEDPWLLRAEDCDTRQIASTGRAPSPTP
GSPRLPETQMMLACAQRVVDGCEVASRMSRRPEAVARIPPLRRGATTLGVTTPAASCGDAPAEAVVHSGS
LKTTSGSKKSVSPKGAFFPRPSGAGPPAPPVRKSSLEQSTALTPTQALGLTRAGAPSAFRGEEEARPSGR
SDSSVPKATSSLKARAGKMDVPYRPSGHMSLERCEGLAHGSSKVRDVVGRPPRAVPRLGVPSASPPLGPA
PACRNSPAKGVGATKPPAGGAKGRNLGPSTSRALGAPVKPLGPVAGKTAGGAVPGPRAAPRAVPGIGAKA
GRGTIMGTKQAFRAAHSRVHELAASGSPSRGGLSWGSTDSDSGNDSGVNLAEERQPSSPALPSPYSKVTA
PRRPQRYSSGHGSDNSSVLSGELPPAMGRTALFYHSGGSSGYESMIRDSEATGSASSAPDSMSESGTASL
GARSRSLKSPKKRATGLQRRRLIPAPLPDAAALGRKPSLPGQWVDLPPPLAGSLKEPFEIKVYEIDDVER
LQRHRLPLRENEAKPSQDAEKGPVCISSKLRLAERRQQRLQEVQAKRDHLCEELAETQGRLMVEPGRWLE
QFEVDPELEPESAEYLVALEQATAALEQCVNLCKAHVMMVTCFDIGVAATTAVPGPQEVDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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