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Report for CCDS40032.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40032.1 Public Mus musculus 7 Arrb1 23 108 98 CCDS HistoryNCBI Gene:109689Re-query CCDS DB by CCDS ID:40032.1Re-query CCDS DB by GeneID:109689See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40032.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098266.8 ENSMUSP00000095866.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098266.8Link to Ensembl Protein Viewer:ENSMUSP00000095866.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000098266Re-query CCDS DB by Protein ID:ENSMUSP00000095866
Original member Current member NCBI NM_177231.2 NP_796205.1 Accepted alive Link to Nucleotide Sequence:NM_177231.2Link to Protein Sequence:NP_796205.1Re-query CCDS DB by Nucleotide ID:NM_177231Re-query CCDS DB by Protein ID:NP_796205Link to BLAST:NP_796205.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_796205.1 418 Q8BWG8-1 418 100% 0 0

Chromosomal Locations for CCDS 40032.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 99535779 99535798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99582261 99582291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99583660 99583720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99587215 99587259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99587998 99588194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99588895 99588954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99589651 99589718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99591263 99591398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99592504 99592588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99592990 99593062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99594621 99594758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99596023 99596106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99597036 99597059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99598491 99598561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99599801 99599852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99601098 99601209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1257 nt):
ATGGGCGACAAAGGGACACGAGTGTTCAAGAAGGCAAGCCCCAATGGAAAGCTCACTGTCTACCTGGGAA
AGCGGGACTTTGTGGACCACATTGACCTCGTGGACCCCGTGGATGGTGTGGTCCTGGTGGATCCTGAGTA
TCTCAAAGAAAGGCGAGTCTACGTGACACTGACCTGCGCCTTCCGGTATGGCCGGGAAGACCTGGATGTC
TTGGGTCTGACTTTTCGGAAAGACCTGTTTGTGGCCAATGTGCAGTCCTTCCCACCGGCCCCCGAGGACA
AGAAGCCACTGACACGGCTACAGGAGCGACTCATCAAGAAGCTGGGCGAGCATGCCTGCCCCTTCACCTT
TGAGATCCCGCCAAACCTTCCATGCTCAGTCACTCTGCAGCCTGGGCCTGAGGACACAGGAAAGGCCTGT
GGTGTGGATTATGAAGTCAAAGCCTTCTGTGCTGAGAACCTGGAGGAGAAGATCCACAAAAGGAACTCTG
TGCGGCTAGTCATCCGGAAGGTTCAGTATGCCCCTGAGAGACCTGGCCCTCAGCCCACGGCTGAGACTAC
CAGACAGTTCCTTATGTCAGACAAGCCCCTACACCTTGAGGCATCACTGGATAAGGAGATCTATTACCAC
GGAGAACCCATCAGCGTTAATGTCCACGTCACCAACAACACCAACAAGACTGTGAAGAAGATCAAGATCT
CGGTGCGCCAGTATGCAGACATCTGTCTCTTCAACACAGCTCAGTACAAGTGCCCAGTGGCCATGGAGGA
GGCTGATGACAATGTGGCACCCAGCTCAACATTCTGCAAGGTCTATACGCTGACTCCCTTCCTGGCCAAC
AACCGAGAGAAGCGGGGACTCGCCCTCGACGGGAAGCTCAAGCATGAGGACACGAATCTGGCTTCCAGCA
CGCTGTTGCGGGAAGGTGCCAACCGTGAAATCCTGGGCATCATCGTTTCCTACAAAGTCAAGGTGAAACT
GGTGGTGTCCCGGGGCGGCCTCTTGGGAGACCTTGCATCCAGTGATGTGGCCGTGGAGCTGCCTTTTACC
CTAATGCACCCCAAGCCTAAGGAGGAGCCCCCACATCGGGAAGTTCCAGAGAGCGAGACTCCAGTAGACA
CCAATCTCATAGAGCTTGACACCAATGATGACGACATTGTATTTGAGGACTTTGCTCGCCAGCGGCTGAA
AGGCATGAAGGATGACAAGGACGAAGAGGATGACGGCACCGGCTCTCCGCACCTCAACAACAGATAG

Translation (418 aa):
MGDKGTRVFKKASPNGKLTVYLGKRDFVDHIDLVDPVDGVVLVDPEYLKERRVYVTLTCAFRYGREDLDV
LGLTFRKDLFVANVQSFPPAPEDKKPLTRLQERLIKKLGEHACPFTFEIPPNLPCSVTLQPGPEDTGKAC
GVDYEVKAFCAENLEEKIHKRNSVRLVIRKVQYAPERPGPQPTAETTRQFLMSDKPLHLEASLDKEIYYH
GEPISVNVHVTNNTNKTVKKIKISVRQYADICLFNTAQYKCPVAMEEADDNVAPSSTFCKVYTLTPFLAN
NREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIVSYKVKVKLVVSRGGLLGDLASSDVAVELPFT
LMHPKPKEEPPHREVPESETPVDTNLIELDTNDDDIVFEDFARQRLKGMKDDKDEEDDGTGSPHLNNR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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