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Report for CCDS34353.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34353.1 Public Homo sapiens 6 NKAPL 24 110 108 CCDS HistoryNCBI Gene:222698Re-query CCDS DB by CCDS ID:34353.1Re-query CCDS DB by GeneID:222698See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34353.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343684.4 ENSP00000345716.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343684.4Link to Ensembl Protein Viewer:ENSP00000345716.3Re-query CCDS DB by Nucleotide ID:ENST00000343684Re-query CCDS DB by Protein ID:ENSP00000345716
Original member Current member NCBI NM_001007531.3 NP_001007532.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001007531.3Link to Protein Sequence:NP_001007532.1Re-query CCDS DB by Nucleotide ID:NM_001007531Re-query CCDS DB by Protein ID:NP_001007532Link to BLAST:NP_001007532.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001007532.1 402 Q5M9Q1 402 100% 0 0

Chromosomal Locations for CCDS 34353.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 28259372 28260580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1209 nt):
ATGCCCCCAGTATCCCGGTCCAGCTATTCCGAGGACATCGTGGGCTCTCGGAGAAGGCGACGCAGCTCCT
CGGGGAGCCCACCATCCCCGCAGAGCAGATGTTCCTCTTGGGATGGCTGTTCCCGCTCTCACTCCCGCGG
CCGTGAGGGCCTCAGGCCTCCTTGGAGTGAGTTGGACGTGGGCGCTCTTTACCCCTTTAGTCGCTCTGGG
TCGCGAGGGCGGCTCCCAAGATTCCGCAACTACGCCTTCGCGTCCTCCTGGTCGACCTCGTATAGTGGAT
ATCGCTACCATCGTCACTGCTATGCAGAAGAACGGCAGTCAGCGGAAGACTACGAGAAGGAAGAGAGCCA
TCGGCAGAGGAGGCTGAAGGAGAGAGAGAGGATTGGGGAATTGGGAGCGCCTGAAGTGTGGGGGCCGTCT
CCAAAGTTCCCTCAGCTAGATTCTGACGAACATACCCCAGTTGAGGATGAAGAAGAGGTAACGCATCAGA
AAAGCAGCAGTTCAGATTCCAACTCGGAAGAACATAGGAAAAAGAAGACCAGTCGTTCAAGAAACAAGAA
AAAAAGAAAGAATAAGTCGTCTAAAAGAAAGCATAGGAAATATTCTGATAGTGACAGTAACTCAGAGTCT
GACACAAATTCTGACTCTGATGATGATAAAAAGAGAGTTAAAGCCAAGAAGAAAAAGAAGAAAAAGAAAC
ACAAAACAAAGAAAAAGAAGAATAAGAAAACCAAAAAAGAATCCAGTGACTCAAGCTGTAAAGACTCAGA
AGAGGACTTGTCAGAAGCTACCTGGATGGAGCAGCCAAATGTGGCAGATACTATGGATTTAATAGGGCCA
GAAGCACCTATAATACATACCTCTCAAGATGAAAAACCTTTGAAGTATGGCCATGCTTTGCTTCCCGGTG
AAGGTGCAGCTATGGCTGAGTATGTAAAAGCTGGAAAGCGAATCCCACGAAGAGGTGAAATTGGGTTGAC
AAGTGAAGAGATCGGTTCTTTTGAATGCTCAGGTTATGTCATGAGTGGTAGCAGGCATCGCAGAATGGAG
GCTGTACGACTGCGTAAGGAGAACCAGATCTACAGTGCTGATGAGAAGAGAGCTCTTGCATCCTTTAACC
AAGAAGAGAGACGAAAGAGAGAAAGTAAGATTTTAGCCAGTTTCCGAGAGATGGTGCACAAAAAGACAAA
AGAGAAAGATGACAAGTAA

Translation (402 aa):
MPPVSRSSYSEDIVGSRRRRRSSSGSPPSPQSRCSSWDGCSRSHSRGREGLRPPWSELDVGALYPFSRSG
SRGRLPRFRNYAFASSWSTSYSGYRYHRHCYAEERQSAEDYEKEESHRQRRLKERERIGELGAPEVWGPS
PKFPQLDSDEHTPVEDEEEVTHQKSSSSDSNSEEHRKKKTSRSRNKKKRKNKSSKRKHRKYSDSDSNSES
DTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNKKTKKESSDSSCKDSEEDLSEATWMEQPNVADTMDLIGP
EAPIIHTSQDEKPLKYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIGSFECSGYVMSGSRHRRME
AVRLRKENQIYSADEKRALASFNQEERRKRESKILASFREMVHKKTKEKDDK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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