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Report for CCDS33123.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33123.1 Public Homo sapiens 19 ZIM2 24 110 108 CCDS HistoryNCBI Gene:23619Re-query CCDS DB by CCDS ID:33123.1Re-query CCDS DB by GeneID:23619See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33123.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000599935.5 ENSP00000468984.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000599935.5Link to Ensembl Protein Viewer:ENSP00000468984.1Re-query CCDS DB by Nucleotide ID:ENST00000599935Re-query CCDS DB by Protein ID:ENSP00000468984
Original member Current member EBI ENST00000601070.5 ENSP00000470326.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000601070.5Link to Ensembl Protein Viewer:ENSP00000470326.1Re-query CCDS DB by Nucleotide ID:ENST00000601070Re-query CCDS DB by Protein ID:ENSP00000470326
Original member Current member EBI ENST00000593711.6 ENSP00000472306.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000593711.6Link to Ensembl Protein Viewer:ENSP00000472306.1Re-query CCDS DB by Nucleotide ID:ENST00000593711Re-query CCDS DB by Protein ID:ENSP00000472306
Original member Current member NCBI NM_001146326.2 NP_001139798.1 Accepted alive Link to Nucleotide Sequence:NM_001146326.2Link to Protein Sequence:NP_001139798.1Re-query CCDS DB by Nucleotide ID:NM_001146326Re-query CCDS DB by Protein ID:NP_001139798Link to BLAST:NP_001139798.1
Original member Current member NCBI NM_001146327.2 NP_001139799.1 Accepted alive Link to Nucleotide Sequence:NM_001146327.2Link to Protein Sequence:NP_001139799.1Re-query CCDS DB by Nucleotide ID:NM_001146327Re-query CCDS DB by Protein ID:NP_001139799Link to BLAST:NP_001139799.1
Original member Current member NCBI NM_001369770.1 NP_001356699.1 Accepted alive Link to Nucleotide Sequence:NM_001369770.1Link to Protein Sequence:NP_001356699.1Re-query CCDS DB by Nucleotide ID:NM_001369770Re-query CCDS DB by Protein ID:NP_001356699Link to BLAST:NP_001356699.1
Original member Current member NCBI NM_001369771.1 NP_001356700.1 Accepted alive Link to Nucleotide Sequence:NM_001369771.1Link to Protein Sequence:NP_001356700.1Re-query CCDS DB by Nucleotide ID:NM_001369771Re-query CCDS DB by Protein ID:NP_001356700Link to BLAST:NP_001356700.1
Original member Current member NCBI NM_001369772.1 NP_001356701.1 Accepted alive Link to Nucleotide Sequence:NM_001369772.1Link to Protein Sequence:NP_001356701.1Re-query CCDS DB by Nucleotide ID:NM_001369772Re-query CCDS DB by Protein ID:NP_001356701Link to BLAST:NP_001356701.1
Original member Current member NCBI NM_001387357.1 NP_001374286.1 Accepted alive Link to Nucleotide Sequence:NM_001387357.1Link to Protein Sequence:NP_001374286.1Re-query CCDS DB by Nucleotide ID:NM_001387357Re-query CCDS DB by Protein ID:NP_001374286Link to BLAST:NP_001374286.1
Original member Current member NCBI NM_001387358.1 NP_001374287.1 Accepted alive Link to Nucleotide Sequence:NM_001387358.1Link to Protein Sequence:NP_001374287.1Re-query CCDS DB by Nucleotide ID:NM_001387358Re-query CCDS DB by Protein ID:NP_001374287Link to BLAST:NP_001374287.1
Original member Current member NCBI NM_015363.5 NP_056178.3 Accepted alive Link to Nucleotide Sequence:NM_015363.5Link to Protein Sequence:NP_056178.3Re-query CCDS DB by Nucleotide ID:NM_015363Re-query CCDS DB by Protein ID:NP_056178Link to BLAST:NP_056178.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139798.1 527 Q9NZV7 527 100% 0 0
NP_001139799.1 527 Q9NZV7 527 100% 0 0
NP_001356699.1 527 Q9NZV7 527 100% 0 0
NP_001356700.1 527 Q9NZV7 527 100% 0 0
NP_001356701.1 527 Q9NZV7 527 100% 0 0
NP_001374286.1 527 Q9NZV7 527 100% 0 0
NP_001374287.1 527 Q9NZV7 527 100% 0 0
NP_056178.3 527 Q9NZV7 527 100% 0 0

Chromosomal Locations for CCDS 33123.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 56774688 56775529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56779377 56779472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56781953 56782121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56789872 56789951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56818600 56818702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56821651 56821754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56822753 56822836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56823590 56823679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 56824262 56824277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1584 nt):
ATGTACCAACCAGAAGACGACAACAACAGTGACGTGACCAGCGACGACGACATGACCCGGAACAGAAGAG
AGTCCTCACCACCTCACTCAGTCCATTCTTTCAGTGGTGACCGGGACTGGGACCGGAGGGGCAGAAGCAG
AGACATGGAGCCACGAGACCGCTGGTCCCACACCAGGAACCCAAGAAGCAGGATGCCTCCGCGGGATCTT
TCCCTTCCTGTGGTGGCGAAAACAAGCTTTGAAATGGACAGAGAGGACGACAGGGACTCCAGGGCTTATG
AGTCCCGATCTCAGGATGCTGAATCATACCAAAATGTGGTGGACCTCGCTGAGGACAGGAAACCTCACAA
CACAATCCAGGACAACATGGAAAACTACAGGAAGCTGCTCTCCCTCGGTTTCCTTGCTCAGGACTCTGTC
CCTGCAGAAAAGAGGAACACAGAGATGTTAGACAATCTGCCATCTGCTGGGTCCCAGTTCCCGGACTTCA
AACACTTAGGAACATTTCTGGTGTTTGAGGAGTTGGTGACCTTCGAGGATGTGCTTGTGGACTTCAGCCC
AGAGGAACTTAGTTCCCTTAGTGCTGCTCAGAGAAACCTCTACAGGGAGGTGATGCTGGAGAATTACCGG
AACCTGGTCTCCCTGGGGCACCAGTTCTCTAAACCTGACATTATCTCACGCCTGGAAGAGGAGGAATCAT
ATGCAATGGAGACAGACAGCAGACATACAGTGATTTGTCAAGGAGAGTCTCATGATGATCCATTGGAACC
ACACCAGGGCAACCAAGAGAAACTTTTGACTCCTATAACAATGAATGACCCCAAGACCCTCACTCCGGAA
AGAAGCTATGGCAGTGATGAATTTGAGAGAAGCTCTAATCTTAGTAAACAATCAAAGGATCCTCTAGGAA
AGGATCCCCAGGAAGGCACTGCTCCTGGAATATGTACGAGTCCCCAGTCAGCATCCCAAGAGAACAAACA
CAACAGATGTGAATTTTGCAAACGAACCTTTAGTACGCAAGTAGCCCTTAGGAGACACGAACGGATCCAT
ACTGGGAAGAAACCCTATGAATGTAAACAGTGTGCTGAAGCCTTCTATCTCATGCCACACCTCAACAGAC
ATCAGAAGACCCATTCTGGTAGGAAGACTTCTGGCTGCAATGAAGGTAGAAAGCCTTCCGTCCAGTGTGC
GAATCTCTGTGAACGTGTAAGAATTCACAGTCAGGAGGACTACTTTGAATGTTTTCAGTGCGGCAAAGCT
TTTCTCCAGAATGTGCATCTTCTTCAACATCTCAAAGCCCATGAGGCAGCAAGAGTCCTTCCTCCTGGGT
TGTCCCACAGCAAGACATACTTAATTCGTTATCAGCGGAAACATGACTACGTTGGAGAGAGAGCCTGCCA
GTGTTGTGACTGTGGCAGAGTCTTCAGTCGGAATTCATATCTCATTCAGCATTATAGAACTCACACTCAA
GAGAGGCCTTACCAGTGTCAGCTATGTGGGAAATGTTTCGGCCGACCCTCATACCTCACTCAACATTATC
AACTCCATTCTCAAGAGAAAACTGTTGAGTGCGATCACTGTTGA

Translation (527 aa):
MYQPEDDNNSDVTSDDDMTRNRRESSPPHSVHSFSGDRDWDRRGRSRDMEPRDRWSHTRNPRSRMPPRDL
SLPVVAKTSFEMDREDDRDSRAYESRSQDAESYQNVVDLAEDRKPHNTIQDNMENYRKLLSLGFLAQDSV
PAEKRNTEMLDNLPSAGSQFPDFKHLGTFLVFEELVTFEDVLVDFSPEELSSLSAAQRNLYREVMLENYR
NLVSLGHQFSKPDIISRLEEEESYAMETDSRHTVICQGESHDDPLEPHQGNQEKLLTPITMNDPKTLTPE
RSYGSDEFERSSNLSKQSKDPLGKDPQEGTAPGICTSPQSASQENKHNRCEFCKRTFSTQVALRRHERIH
TGKKPYECKQCAEAFYLMPHLNRHQKTHSGRKTSGCNEGRKPSVQCANLCERVRIHSQEDYFECFQCGKA
FLQNVHLLQHLKAHEAARVLPPGLSHSKTYLIRYQRKHDYVGERACQCCDCGRVFSRNSYLIQHYRTHTQ
ERPYQCQLCGKCFGRPSYLTQHYQLHSQEKTVECDHC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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