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Report for CCDS26833.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26833.1 Public Mus musculus 14 Top2b 23 108 98 CCDS HistoryNCBI Gene:21974Re-query CCDS DB by CCDS ID:26833.1Re-query CCDS DB by GeneID:21974See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26833.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000017629.11 ENSMUSP00000017629.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000017629.11Link to Ensembl Protein Viewer:ENSMUSP00000017629.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000017629Re-query CCDS DB by Protein ID:ENSMUSP00000017629
Original member NCBI NM_009409.2 NP_033435.2 Updated not alive Link to Nucleotide Sequence:NM_009409.2Link to Protein Sequence:NP_033435.2Re-query CCDS DB by Nucleotide ID:NM_009409Re-query CCDS DB by Protein ID:NP_033435
Current member NCBI NM_009409.3 NP_033435.2 Accepted alive Link to Nucleotide Sequence:NM_009409.3Link to Protein Sequence:NP_033435.2Re-query CCDS DB by Nucleotide ID:NM_009409Re-query CCDS DB by Protein ID:NP_033435Link to BLAST:NP_033435.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033435.2 1612 Q64511 1612 100% 0 0

Chromosomal Locations for CCDS 26833.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 16365679 16365726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16383062 16383217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16384457 16384547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16386091 16386154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16387273 16387418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16388390 16388487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16389767 16389979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16393159 16393332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16395407 16395508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16395592 16395729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16397783 16397921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16398607 16398764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16398909 16399034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16400017 16400127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16400391 16400496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16406730 16406839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16407112 16407204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16407291 16407405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16408827 16408948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16409169 16409317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16409794 16410025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16412056 16412190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16412919 16413119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16413561 16413756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16413902 16413993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16416557 16416712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16416952 16417035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16418337 16418531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16420341 16420485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16420703 16420864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16422622 16422823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16423699 16423778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16425355 16425465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16428474 16428599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16429338 16429432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 16430299 16430466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4839 nt):
ATGGCCAAGTCCAGCCTCGCGGGCTCTGACGGGGCGCTGACCTGGGTGAACAATGCTACAAAAAAGGAAG
AGTTGGAGACAGCAAACAAAAATGACTCTACTAAGAAGTTGTCTGTTGAGAGAGTGTACCAGAAGAAGAC
CCAACTGGAGCACATTCTCCTTCGTCCTGATACATACATTGGATCAGTGGAGCCACTGACACAGCTAATG
TGGGTGTATGATGAAGATGTAGGGATGAACTGCAGGGAGGTCACCTTTGTTCCAGGCTTATACAAGATCT
TTGATGAAATTTTGGTTAATGCTGCTGACAACAAGCAGAGGGACAAGAACATGACCTGTATTAAGGTTTC
TATTGATCCTGAATCTAATATTATAAGCATTTGGAATAATGGGAAAGGCATTCCAGTAGTAGAACACAAA
GTAGAGAAAGTTTATGTTCCTGCTTTAATTTTTGGACAGCTTTTAACATCGAGTAATTATGACGATGATG
AGAAAAAAGTTACAGGAGGCCGTAATGGTTATGGTGCAAAGCTTTGTAATATTTTTAGTACAAAGTTTAC
AGTAGAAACGGCTTGCAAAGAATACAAACATAGTTTTAAACAGACATGGATGAATAATATGATGAAGACT
TCTGAAGCCAAAATTAAACATTTTGATGGTGAAGATTATACATGCATAACATTCCAGCCAGATCTATCCA
AATTTAAGATGGAAAAACTTGACAAGGACATTGTGGCCCTCATGACCAGAAGAGCATATGATTTAGCTGG
GTCCTGTAAAGGAGTCAAGGTCATGTTTAATGGGAAGAAGTTGCCTGTAAATGGATTTCGCAGCTATGTA
GACCTTTATGTGAAAGACAAATTGGATGAAACTGGGGTGGCTCTCAAAGTTATTCATGAACTTGCAAATG
AAAGATGGGATGTTTGTCTAACCTTGAGTGAAAAAGGTTTCCAGCAGATCAGCTTTGTGAATAGTATTGC
AACTACAAAAGGTGGGCGGCATGTGGATTATGTAGTAGATCAAGTTGTTAGTAAACTGATTGAAGTAGTT
AAGAAAAAGAACAAAGCTGGTGTATCAGTGAAACCATTTCAGGTTAAAAACCATATATGGGTTTTTATTA
ATTGTCTTATTGAAAATCCAACCTTTGATTCTCAAACTAAGGAAAACATGACTCTGCAGCCCAAAAGTTT
TGGGTCCAAATGCCAACTGTCAGAAAAATTTTTTAAAGCAGCCTCTAATTGTGGCATTGTAGAAAGCATA
TTGAACTGGGTGAAATTTAAGGCTCAGACTCAACTGAATAAGAAGTGTTCATCAGTAAAGTACAGTAAAA
TCAAAGGCATTCCCAAACTGGATGATGCCAATGATGCTGGTGGCAAACATTCCCTGGAGTGTACATTAAT
ATTAACAGAGGGGGACTCCGCCAAATCTCTAGCTGTATCTGGATTAGGTGTGATTGGTAGGGACAGATAT
GGAGTCTTCCCACTCAGGGGTAAAATTCTCAATGTACGAGAAGCCTCTCATAAACAGATTATGGAAAATG
CAGAGATAAATAATATTATTAAAATAGTTGGTTTGCAATACAAGAAAAGTTATGATGATGCAGAATCTCT
GAAAACTTTACGTTATGGAAAGATTATGATTATGACTGATCAGGATCAAGATGGTTCTCACATCAAAGGC
CTGCTAATCAATTTTATTCATCACAATTGGCCATCACTTTTGAAGCATGGTTTTCTTGAAGAATTCATTA
CTCCCATTGTAAAGGCAAGCAAAAATAAGCAGGAACTTTCCTTTTATAGTATTCCTGAATTTGATGAGTG
GAAAAAACATATAGAAAACCAGAAAGCCTGGAAAATAAAGTACTACAAAGGATTAGGTACCAGTACCGCT
AAAGAAGCAAAGGAATATTTTGCTGATATGGAAAGGCATCGCATTTTGTTTAGATATGCTGGACCTGAAG
ATGATGCTGCCATCACCTTGGCATTTAGTAAGAAGAAGATTGATGACAGAAAAGAGTGGTTAACCAACTT
TATGGAGGATCGGAGACAGCGTAGGTTACATGGCCTACCAGAGCAATTTTTATATGGTACAGCAACAAAG
CATTTGACATACAATGATTTCATCAACAAGGAATTGATTCTCTTCTCAAACTCGGACAATGAGAGATCTA
TCCCATCTCTTGTGGATGGCTTCAAGCCAGGTCAACGAAAAGTTTTGTTTACCTGTTTCAAGAGGAATGA
TAAACGTGAAGTGAAAGTAGCGCAGCTGGCTGGATCTGTTGCTGAGATGTCTGCTTACCACCATGGAGAA
CAAGCATTGATGATGACTATTGTGAATTTGGCTCAGAATTTTGTGGGCAGTAATAACATTAACTTGCTTC
AGCCCATTGGTCAGTTTGGAACTCGGCTTCATGGTGGCAAAGATGCTGCAAGCCCTCGTTATATTTTCAC
AATGTTGAGCTCTCTGGCAAGACTTCTTTTTCCAGCTGTGGATGATAACTTGCTTAAGTTCCTTTATGAT
GATAATCAACGTGTAGAGCCAGAGTGGTATATCCCTATAATCCCCATGGTTTTGATTAATGGTGCTGAGG
GTATTGGGACTGGATGGGCTTGTAAACTGCCCAACTATGATGCTAGAGAAATTGTGAACAATGTCAGGCG
GATGCTAGAAGGTTTGGATCCTCATCCCATGCTTCCAAACTATAAGAACTTCAAAGGCACCATCCAGGAA
CTTGGTCAGAACCAGTATGCTGTTAGTGGTGAGATATTTGTGGTGGACAGAAACACAGTAGAGATTACAG
AACTTCCAGTTAGAACATGGACACAGGTATACAAGGAGCAGGTCCTAGAACCTATGCTTAATGGAACAGA
TAAAACACCGGCACTGATTTCTGATTACAAAGAATATCATACTGACACAACTGTGAAGTTTGTGGTGAAA
ATGACAGAAGAGAAACTAGCGCAAGCAGAAGCTGCTGGCCTGCATAAAGTTTTTAAACTTCAAACTACTC
TTACTTGCAATTCCATGGTACTCTTTGATCATATGGGTTGTCTGAAGAAGTATGAAACTGTGCAAGACAT
TTTGAAAGAATTCTTTGATTTACGGTTAAGTTATTATGGTTTACGGAAGGAATGGCTTGTAGGAATGCTG
GGAGCAGAATCTACAAAGCTTAATAATCAAGCCCGTTTCATTTTAGAGAAGATACAGGGGAAAATTACTA
TAGAGAATAGGTCAAAGAAAGATTTGATTCAAATGTTAGTCCAGAGAGGTTATGAATCTGACCCAGTGAA
AGCGTGGAAAGAAGCACAAGAAAAGGCTGCAGAAGAGGAAGATTCACAAAACCAACATGATGACAGTTCC
TCTGATTCAGGAACTCCTTCAGGCCCTGATTTTAATTATATTTTAAATATGTCTCTATGGTCTCTTACTA
AAGAAAAAGTTGAAGAACTCATTAAACAGAGAGATACGAAAGGGCGAGAGGTTAATGATCTCAAGAGGAA
GTCTCCTTCAGATCTTTGGAAAGAAGACTTAGCAGCATTTGTTGAAGAATTGGATAAAGTGGAAGCACAA
GAGCGGGAAGATATTCTGGCAGGAATGTCTGGGAAAGCAATAAAAGGTAAAGTCGGCAAACCCAAAGTAA
AGAAACTTCAGCTGGAGGAGACAATGCCCTCGCCTTACGGGAGAAGAATTGTTCCAGAGATTACTGCTAT
GAAGGCAGATGCCAGCAGAAAATTGCTGAAGAAGAAAAAGGGTGATCCTGATACCACAGTAGTGAAAGTA
GAATTTGATGAAGAATTTAGTGGAACACCAGCAGAAGGTACAGGAGAGGAGACATTGACCCCATCTGCTC
CTGTAAATAAAGGCCCCAAACCCAAAAGAGAGAAGAAGGAGCCTGGTACCAGGGTTAGAAAAACACCTAC
ATCAACTGGTAAAACTAATGCGAAGAAAGTGAAGAAACGGAATCCTTGGTCAGATGATGAGTCCAAATCA
GAGAGTGACTTGGAAGAAGCAGAACCTGTGGTTATCCCAAGAGATTCTTTGCTTAGGAGAGCAGCTGCTG
AAAGACCTAAGTACACTTTTGATTTCTCAGAAGAGGAGGATGATGATGCTGCTGCTGCTGATGACAGTAA
TGATTTAGAAGAACTGAAAGTTAAAGCATCTCCCATAACAAATGATGGGGAAGATGAATTTGTTCCTTCA
GATGGCTTAGATAAAGATGAGTATGCTTTTTCTTCAGGCAAATCCAAAGCTACTCCAGAAAAATCTTCAA
ATGACAAAAAAAGTCAGGATTTTGGAAATCTTTTTTCATTTCCTTCATATTCTCAGAAGTCAGAAGATGA
TTCAGCTAAATTTGACAGTAATGAAGAAGATACCGCTTCTGTTTTTGCTCCATCATTTGGTCTGAAGCAA
ACAGATAAACTTCCAAGTAAAACAGTTGCTGCTAAAAAGGGTAAACCACCTTCAGATACAGCCCCTAAAG
CTAAGAGAGCCCCTAAACAGAAGAAGATAGTAGAGACTATAAACTCTGACTCAGACTCTGAATTTGGCAT
TCCAAAGAAGACTACAACACCAAAAGGTAAAGGCCGAGGGGCAAAGAAAAGGAAAGCATCAGGCTCAGAA
AATGAAGGTGATTATAACCCTGGAAGGAAACCATCTAAAACAGCCAGCAAGAAACCGAAGAAAACATCTT
TTGATCAGGATTCAGATGTAGACATCTTCCCCTCAGACTTCACTTCTGAACCACCGGCTCTCCCACGGAC
TGGTCGGGCTAGGAAAGAAGTAAAATATTTTGCAGAGTCTGATGAAGAAGAAGATGTTGATTTTGCAATG
TTTAATTAA

Translation (1612 aa):
MAKSSLAGSDGALTWVNNATKKEELETANKNDSTKKLSVERVYQKKTQLEHILLRPDTYIGSVEPLTQLM
WVYDEDVGMNCREVTFVPGLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHK
VEKVYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKT
SEAKIKHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCKGVKVMFNGKKLPVNGFRSYV
DLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQVVSKLIEVV
KKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQPKSFGSKCQLSEKFFKAASNCGIVESI
LNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRY
GVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQDQDGSHIKG
LLINFIHHNWPSLLKHGFLEEFITPIVKASKNKQELSFYSIPEFDEWKKHIENQKAWKIKYYKGLGTSTA
KEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATK
HLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGE
QALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYD
DNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLEGLDPHPMLPNYKNFKGTIQE
LGQNQYAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVK
MTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGML
GAESTKLNNQARFILEKIQGKITIENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDSQNQHDDSS
SDSGTPSGPDFNYILNMSLWSLTKEKVEELIKQRDTKGREVNDLKRKSPSDLWKEDLAAFVEELDKVEAQ
EREDILAGMSGKAIKGKVGKPKVKKLQLEETMPSPYGRRIVPEITAMKADASRKLLKKKKGDPDTTVVKV
EFDEEFSGTPAEGTGEETLTPSAPVNKGPKPKREKKEPGTRVRKTPTSTGKTNAKKVKKRNPWSDDESKS
ESDLEEAEPVVIPRDSLLRRAAAERPKYTFDFSEEEDDDAAAADDSNDLEELKVKASPITNDGEDEFVPS
DGLDKDEYAFSSGKSKATPEKSSNDKKSQDFGNLFSFPSYSQKSEDDSAKFDSNEEDTASVFAPSFGLKQ
TDKLPSKTVAAKKGKPPSDTAPKAKRAPKQKKIVETINSDSDSEFGIPKKTTTPKGKGRGAKKRKASGSE
NEGDYNPGRKPSKTASKKPKKTSFDQDSDVDIFPSDFTSEPPALPRTGRARKEVKYFAESDEEEDVDFAM
FN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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