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Report for CCDS23691.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23691.1 Public Mus musculus 10 Tab2 23 108 98 CCDS HistoryNCBI Gene:68652Re-query CCDS DB by CCDS ID:23691.1Re-query CCDS DB by GeneID:68652See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23691.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000146444.7 ENSMUSP00000121266.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000146444.7Link to Ensembl Protein Viewer:ENSMUSP00000121266.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000146444Re-query CCDS DB by Protein ID:ENSMUSP00000121266
Original member Current member NCBI NM_001359534.1 NP_001346463.1 Accepted alive Link to Nucleotide Sequence:NM_001359534.1Link to Protein Sequence:NP_001346463.1Re-query CCDS DB by Nucleotide ID:NM_001359534Re-query CCDS DB by Protein ID:NP_001346463Link to BLAST:NP_001346463.1
Original member Current member NCBI NM_138667.3 NP_619608.1 Accepted alive Link to Nucleotide Sequence:NM_138667.3Link to Protein Sequence:NP_619608.1Re-query CCDS DB by Nucleotide ID:NM_138667Re-query CCDS DB by Protein ID:NP_619608Link to BLAST:NP_619608.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001346463.1 693 Q99K90 693 100% 0 0
NP_619608.1 693 Q99K90 693 100% 0 0

Chromosomal Locations for CCDS 23691.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 7907435 7907577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7910047 7910127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7911089 7911182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7911388 7911548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7919114 7920614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 7924685 7924786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2082 nt):
ATGGCCCAAGGAAGCCACCAAATTGATTTTCAGGTTTTACATGACCTGCGACAAAAATTCCCAGAAGTGC
CT
GAAGTTGTTGTATCCAGGTGCATGTTACAGAACAATAATAACCTGGATGCCTGCTGCGCTGTTCTCTC
T
CAGGAGAGTACAAGGTATCTTTATGGTGAAGGAGACCTGAATTTTTCAGATGAGTCTGGAATTTCTGGT
CTA
CGCAATCACATGACTTCTCTCAACTTGGACTTGCAGTCACAGAATGTTTACCACCATGGAAGAGAAG
GA
AGTCGAGTGAATGGAAGCAGGACTTTAACACACAGCGTTAGTGATGGACAGCTTCACGGTGGGCAGTC
C
AATAACGAACTGTTTCAGCAAGAGCCACAGACAGCACCAGCTCAAGTTCCTCAAGGCTTTAATGTTTTT
GGA
ATGCCCAGTACATCTGGTGCTTCAAACTCAACACCGCATCTTGGATTTCACCTAGGCAGCAAAGGGA
CA
TCAAACCTTTCTCAACAGACTCCCAGGTTCAATCCTATTATGGTAACTTTAGCCCCAAACATACAGAC
T
GGCCGTAGTACTCCTACATCTTTGCACATACATGGTGTACCTCCGCCTGTACTGAACAGTCCACAGGGA
AAT
TCTATCTATATTAGGCCTTATATTACAACTCCTAGTGGTACAGCTCGGCAGACACAACAACATTCTG
GC
TGGGTGTCTCAGTTTAATCCCATGAACCCTCAGCAAGCCTATCAACCTTCACAGCCTGGACCTTGGAC
T
ACTTATCCTGCATCCAATCCTTTGCCACATACCTCAACCCAGCAGCCGAATCAGCAGGGCCATCAGACC
TCT
CATGTCTACATGCCTATCAGTTCGCCAACTACTCCACAACCGCCAACCATTCACTCATCTGGGAGCT
CT
CAGTCTTCTGCCCATAGCCAATATAACATTCAGAATATTTCAACAGGACCTCGAAAGAACCAGATAGA
A
ATCAAACTTGAACCCCCACAAAGAAACAGTTCTTCAAAATTACGTTCTTCTGGACCTCGAACTGCCAGC
ACT
TCCTCATTGGTCAACAGCCAGACCTTAAATAGAAATCAGCCCACTGTTTACATAGCTGCCAGTCCTC
CA
AATACTGATGAGATGATCTCCCGTAGTCAACCCAAGGTCTATATTTCAGCCAATGCCACCGCAGGAGA
T
GAGCAAGGCATGCGGAATCAACCGACACTCTTCATATCTACAAACTCTGGGCCATCTGCAGCCTCCAGG
AAC
ATGTCTGGGCAAGTGAGCATGGGTCCTGCCTTTATCCATCACCATCCACCCAAAAGCCGAGTGTTAG
GT
GGTAACTCTGCAACGTCTCCTCGAGTGGTGGTCACTCAACCCAACACAAAATATACTTTCAAAATTAC
A
GTTTCCCCCAATAAGCCCCCTGCTGTTTCCCCGGGGGTGGTCTCCCCAACCTTTGAACTTACAAATCTT
CTA
AATCATCCTGACCATTATGTAGAAACAGAGAACATTCAGCATCTCACAGACCCGGCTCTAGCACATG
TG
GATAGAATAAGCGAAGCCCGGAAACTGAGTATGGGATCTGATGATGCTGCCTACACACAAGCTCTGCT
G
GTGCACCAGAAGGCCAGGATGGAACGGCTTCAAAGAGAGCTCGAGATGCAAAAGAAAAAGCTGGATAAA
CTC
AAATCTGAGGTCAATGAGATGGAAAATAATCTAACTCGAAGGCGCCTGAAGAGATCAAATTCCATTT
CC
CAGATACCGTCACTCGAAGAAATGCAGCAGTTGAGAAGTTGTAATAGACAACTCCAGATTGACATTGA
C
TGCTTAACCAAAGAAATTGATCTTTTTCAAGCCCGAGGACCACATTTTAACCCCAGCGCTATTCATAAC
TTT
TATGACAATATTGGATTTGTAGGCCCTGTGCCACCAAAACCCAAAGATCAAAGGTCCACCATCAAAG
CA
CCAAAGACCCAAGACGCAGAGGATGAGGAAGGTGCTCAGTGGAATTGCACTGCCTGTACGTTTCTGAA
T
CACCCGGCCTTAATCCGCTGTGAACAGTGTGAGATGCCTCGGCATTTCTGA


Translation (693 aa):
MAQGSHQIDFQVLHDLRQKFPEVPEVVVSRCMLQNNNNLDACCAVLSQESTRYLYGEGDLNFSDESGISG
L
RNHMTSLNLDLQSQNVYHHGREGSRVNGSRTLTHSVSDGQLHGGQSNNELFQQEPQTAPAQVPQGFNVF
G
MPSTSGASNSTPHLGFHLGSKGTSNLSQQTPRFNPIMVTLAPNIQTGRSTPTSLHIHGVPPPVLNSPQG
N
SIYIRPYITTPSGTARQTQQHSGWVSQFNPMNPQQAYQPSQPGPWTTYPASNPLPHTSTQQPNQQGHQT
S
HVYMPISSPTTPQPPTIHSSGSSQSSAHSQYNIQNISTGPRKNQIEIKLEPPQRNSSSKLRSSGPRTAS
T
SSLVNSQTLNRNQPTVYIAASPPNTDEMISRSQPKVYISANATAGDEQGMRNQPTLFISTNSGPSAASR
N
MSGQVSMGPAFIHHHPPKSRVLGGNSATSPRVVVTQPNTKYTFKITVSPNKPPAVSPGVVSPTFELTNL
L
NHPDHYVETENIQHLTDPALAHVDRISEARKLSMGSDDAAYTQ
ALLVHQKARMERLQRELEMQKKKLDK
L
KSEVNEMENNLTRRRLKRSNSISQIPS
LEEMQQLRSCNRQLQIDIDCLTKEIDLFQARGPHFNPSAIHN
F
YDNIGFVGPVPPKPK
DQRSTIKAPKTQDAEDEEGAQWNCTACTFLNHPALIRCEQCEMPRHF



Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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