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Report for CCDS21691.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21691.1 Public Mus musculus 7 Ppfibp2 23 108 98 CCDS HistoryNCBI Gene:19024Re-query CCDS DB by CCDS ID:21691.1Re-query CCDS DB by GeneID:19024See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21691.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040056.14 ENSMUSP00000042574.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040056.14Link to Ensembl Protein Viewer:ENSMUSP00000042574.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000040056Re-query CCDS DB by Protein ID:ENSMUSP00000042574
Original member NCBI NM_008905.2 NP_032931.2 Updated not alive Link to Nucleotide Sequence:NM_008905.2Link to Protein Sequence:NP_032931.2Re-query CCDS DB by Nucleotide ID:NM_008905Re-query CCDS DB by Protein ID:NP_032931
Current member NCBI NM_008905.3 NP_032931.2 Accepted alive Link to Nucleotide Sequence:NM_008905.3Link to Protein Sequence:NP_032931.2Re-query CCDS DB by Nucleotide ID:NM_008905Re-query CCDS DB by Protein ID:NP_032931Link to BLAST:NP_032931.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032931.2 882 O35711-1 882 99.8866% 0 1

Chromosomal Locations for CCDS 21691.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 107637247 107637310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107653018 107653232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107681762 107681854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107685860 107685973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107697567 107697698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107708780 107708872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107714586 107714697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107716636 107716697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107717705 107717780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107719208 107719311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107721331 107721398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107722104 107722161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107722937 107722978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107727644 107727785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107728716 107728748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107729139 107729265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107729821 107729949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107737841 107737991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107738275 107738386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107738601 107738689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107739187 107739309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107740508 107740633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107742906 107743094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 107744177 107744371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2649 nt):
ATGACTTCTGACGCTAGTCATATGCTGGAAGCTGCCCTGGAGCAGATGGACGGGATCATTGCAGGCACTA
AAACAGCTGCAGATTTTAGTGATGGTACCTGTGAGCCTGGGCTGTCTCCCCCATCCACCTGCTTGAACTC
CATGCCTGTGCTCCATCTCATTGAGGACCTGAGACTAGCCTTGGAGATGTTGGCACTTCCTCAGGAAAGA
GAAGCCCTCCTGAGCCAGGTCCCTGGCCCAACAGCTACCTACATAAAGGAGTGGTTTGAGGACAGCTTGT
CCCAGGTAAATCACCACGGTGCTGCTAGTAATGAAACCTACCAGGAACGCCTGGCACGGCTAGAAGGAGA
TAAAGAGTCCCTCATACTACAGGTGAGCGTCCTCACAGATCAAGTGGAAGCCCAAGGAGAGAAGATTCGG
GACCTTGAAGTGTGTCTGGAAGGCCACCAGGTGAAGCTCAATGCTGCAGAAGAGATGCTTCAGCAGGAGC
TGCTAAGTCGCACATCTCTGGAGACCCAGAAGTTGGATCTGATGACTGAGGTGTCTGAGCTGAAGCTCAA
GCTGGTTGGTATGGAAAAAGAACAGAAAGAACAAGAAGAAAAACAGAGAAAAGCAGAGGAGTTACTGCAA
GAGCTTAAGCACCTCAAAATCAAGGTGGAGGAGCTGGAGAACGAGCGGAACCAGTATGAGTGGGAGCTGA
AGGCCACCAAGGCTGAGGTAGCCCAGCTGCAAGAACAGGTGGCCCTAAAAGATGCAGAAATTGAGCGTCT
CCACAGCCAGCTCTCCCGGAGTGCAGCTCTCCACAGCGACCATGCAGAGCGAGATCAAGAAATCCACCGT
CTGAAAATGGGGATGGAAACACTGCTGGTTGCCAATGAGGATAAGGACCGTCGGATAGAGGAGCTGACAG
GGCTGTTGAACAAGTACCTAAGGGTAAAGGAGATTGTGATGGCAACTCAGGGGCCTTCAGAAAGAACCCT
CTCCATCAATGAAGATGAAATAGAGGGAAGCTTCCGAAAATGGAATACCACAAATAAAAGCCCAGAGGAA
GTCCCGAAGCAAGAGATATCACCACGATGCAGCTCTCCCACCCCAGGACCACCTCCTTTGCCACAGAAAT
CACTGGAGAGCAGGGCTCAGAAGAAACTCTCCTGCAGTCTAGAAGACTTGAGACGTGAATCTGGGGATAA
GTGTGTCGATGGGAACCAGCTGTCCCCAGTGGGAGAGCCCAAGGACAGCTCTTTCCTAGCGGAGCAGAAA
TACCCCACATTACCTGGGAAGCTTTCAGGAGCCACACCCAATGGAGAAGCTGCCAAATCTCCTCCCACTG
CCTCCCTCCAGCCTGACTCTTCAGGGAGCAGCCAGCCAAAGCTGAATCGCGGCTGGAGTGTCAGTGCTCC
CGTATTAGGAGACACAGAAGGAGGCTGGGAAGATATAGTCTCATCTGCTTCGTCTGGGACTGAGTCAAGC
CCTCAGTCTCCCGTGACACCAGATGGCAAACGGAGCCCCAAAGGCATTAAGAAGTTCTGGGGAAAGATCC
GAAGAACTCAGTCTGGAAACTTCAATACTGATGCACCGGGGATGGCAGAGTTTCGACGAGGTGGGCTCCG
AGCAACTGCGGGACCAAGGCTTTCTAGGACCAGGGACACCAAGGGACAGAAATGTGATGCCAATGCCCCC
TTTGCCCAGTGGAGCACAGAACGCGTATGTACATGGATGGAGGATTTCGGCCTGGGTCAGTATGTGATCT
TTGCCAGACAGTGGGTGACATCTGGACATACACTACTGACAGCTACCCCTCAGGACATGGAAAAGGAGCT
AGGGATTAAACACCCCCTCCACAGGAAGAAGCTGGTTTTAGCAGTGAAAGCTATCAACGCCAAGCAAGAA
GAAACGTCTGCGCTGCTGGACCACATTTGGGTGACACGGTGGCTTGATGATATTGGCTTACCCCAATACA
AAGACCAGTTTCATGAATCAAGAGTTGATGGGCGAATGCTGCAATACCTAACTGTGAATGATCTACTCTT
CTTAAAAGTCACCAGCCAACTACATCATCTCAGCATCAAATGTGCTATTCACGTGCTACATGTCAACAAG
TTCAACCCCAACTGCCTGCACAGGAGGCCTGCTGATGAGAGTAACCTTTCCCCTTCCGAAGTTGTGCAGT
GGTCCAACCACAGGGTAATGGAGTGGCTGCGATCCGTGGACCTGGCAGAGTATGCACCCAACCTTCGAGG
GAGTGGCGTCCATGGCGGCCTCATTATCCTGGAGCCTCGCTTTACTGGGGACACCCTGGCTATGCTTCTT
AACATCCCCCCACAGAAGACGCTCCTCAGGCGCCATCTGACCACCAAGTTCAACGCCCTGATTGGTCCTG
AGGCTGAACAGGAAAAGCGAGACAAAATGGCCTCACCCGCCTACACACCTCTGACCACCACCGCCAAAGT
TCGGCCTAGGAAACTTGGATTTTCACATTTTGGAAACATGAGAAAAAAGAAGTTTGATGAATCTACAGAT
TACATTTGCCCCATGGAGCCTGGAGATGCTGTCAGTGACAGCCACAGGGTCTACGGAGTCTACCGGGGCC
TCAGTCCCCTTGACAACCATGAACTAGATGGTTTGGACCAGGTGGGACAGATAAGCTGA

Translation (882 aa):
MTSDASHMLEAALEQMDGIIAGTKTAADFSDGTCEPGLSPPSTCLNSMPVLHLIEDLRLALEMLALPQER
EALLSQVPGPTATYIKEWFEDSLSQVNHHGAASNETYQERLARLEGDKESLILQVSVLTDQVEAQGEKIR
DLEVCLEGHQVKLNAAEEMLQQELLSRTSLETQKLDLMTEVSELKLKLVGMEKEQKEQEEKQRKAEELLQ
ELKHLKIKVEELENERNQYEWELKATKAEVAQLQEQVALKDAEIERLHSQLSRSAALHSDHAERDQEIHR
LKMGMETLLVANEDKDRRIEELTGLLNKYLRVKEIVMATQGPSERTLSINEDEIEGSFRKWNTTNKSPEE
VPKQEISPRCSSPTPGPPPLPQKSLESRAQKKLSCSLEDLRRESGDKCVDGNQLSPVGEPKDSSFLAEQK
YPTLPGKLSGATPNGEAAKSPPTASLQPDSSGSSQPKLNRGWSVSAPVLGDTEGGWEDIVSSASSGTESS
PQSPVTPDGKRSPKGIKKFWGKIRRTQSGNFNTDAPGMAEFRRGGLRATAGPRLSRTRDTKGQKCDANAP
FAQWSTERVCTWMEDFGLGQYVIFARQWVTSGHTLLTATPQDMEKELGIKHPLHRKKLVLAVKAINAKQE
ETSALLDHIWVTRWLDDIGLPQYKDQFHESRVDGRMLQYLTVNDLLFLKVTSQLHHLSIKCAIHVLHVNK
FNPNCLHRRPADESNLSPSEVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLIILEPRFTGDTLAMLL
NIPPQKTLLRRHLTTKFNALIGPEAEQEKRDKMASPAYTPLTTTAKVRPRKLGFSHFGNMRKKKFDESTD
YICPMEPGDAVSDSHRVYGVYRGLSPLDNHELDGLDQVGQIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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