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Report for CCDS14133.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14133.1 Public Homo sapiens X TBL1X 24 110 108 CCDS HistoryNCBI Gene:6907Re-query CCDS DB by CCDS ID:14133.1Re-query CCDS DB by GeneID:6907See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14133.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000407597.7 ENSP00000385988.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407597.7Link to Ensembl Protein Viewer:ENSP00000385988.2Re-query CCDS DB by Nucleotide ID:ENST00000407597Re-query CCDS DB by Protein ID:ENSP00000385988
Original member Current member EBI ENST00000645686.1 ENSP00000493782.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000645686.1Link to Ensembl Protein Viewer:ENSP00000493782.1Re-query CCDS DB by Nucleotide ID:ENST00000645686Re-query CCDS DB by Protein ID:ENSP00000493782
Original member Current member EBI ENST00000646640.1 ENSP00000495556.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000646640.1Link to Ensembl Protein Viewer:ENSP00000495556.1Re-query CCDS DB by Nucleotide ID:ENST00000646640Re-query CCDS DB by Protein ID:ENSP00000495556
Original member Current member EBI ENST00000645353.2 ENSP00000496215.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000645353.2Link to Ensembl Protein Viewer:ENSP00000496215.1Re-query CCDS DB by Nucleotide ID:ENST00000645353Re-query CCDS DB by Protein ID:ENSP00000496215
Original member Current member NCBI NM_001139466.1 NP_001132938.1 Accepted alive Link to Nucleotide Sequence:NM_001139466.1Link to Protein Sequence:NP_001132938.1Re-query CCDS DB by Nucleotide ID:NM_001139466Re-query CCDS DB by Protein ID:NP_001132938Link to BLAST:NP_001132938.1
Original member Current member NCBI NM_005647.4 NP_005638.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005647.4Link to Protein Sequence:NP_005638.1Re-query CCDS DB by Nucleotide ID:NM_005647Re-query CCDS DB by Protein ID:NP_005638Link to BLAST:NP_005638.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001132938.1 577 O60907-1 577 100% 0 0
NP_005638.1 577 O60907-1 577 100% 0 0

Chromosomal Locations for CCDS 14133.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 9653587 9653689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9654215 9654322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9684043 9684188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9688017 9688275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9691579 9691711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9692113 9692254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9693149 9693212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9693322 9693419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9697369 9697429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9704993 9705114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9709248 9709322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9709633 9709760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9711611 9711776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9714902 9715003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 9716220 9716246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1734 nt):
ATGACCGAGCTCGCTGGCGCCTCTTCATCGTGCTGCCACCGCCCTGCAGGAAGAGGGGCCATGCAGTCAG
TCTTGCACCACTTTCAACGTTTGCGAGGGAGAGAGGGTGGTTCCCACTTCATCAACACCTCATCGCCGCG
AGGTGAGGCTAAGATGAGCATAACCAGTGACGAGGTGAACTTTCTGGTGTATCGGTATCTCCAGGAGTCA
GGTTTTTCCCACTCGGCTTTCACGTTTGGGATTGAGAGCCACATCAGCCAGTCCAACATCAATGGGACGC
TAGTGCCACCGGCCGCCCTCATCTCCATTCTCCAGAAGGGCCTGCAGTATGTAGAGGCCGAGATCAGTAT
CAACGAGGATGGCACAGTGTTCGACGGCCGCCCCATAGAGTCCCTGTCACTGATAGACGCCGTGATGCCC
GACGTGGTGCAGACGCGGCAGCAGGCATTCCGAGAGAAGCTCGCTCAGCAGCAAGCCAGTGCGGCGGCGG
CGGCGGCTGCGGCCACGGCAGCAGCGACAGCAGCCACCACGACCTCAGCCGGCGTTTCCCACCAAAATCC
ATCGAAGAACAGAGAGGCCACGGTGAATGGGGAAGAGAACAGAGCACATTCAGTCAATAATCACGCGAAG
CCAATGGAAATAGATGGAGAGGTTGAGATTCCATCCAGCAAAGCCACAGTCCTTCGGGGCCATGAGTCTG
AGGTGTTCATTTGTGCCTGGAATCCTGTCAGTGATTTGCTAGCCTCCGGATCTGGAGACTCAACTGCAAG
GATATGGAACCTGAATGAGAATAGCAACGGGGGCTCCACCCAGCTCGTGTTGAGGCACTGTATACGAGAG
GGGGGCCATGACGTCCCGAGTAACAAAGACGTCACCTCACTGGACTGGAATACCAATGGAACACTCTTGG
CTACGGGTTCATATGACGGTTTTGCAAGAATATGGACGGAAGATGGTAACCTGGCCAGCACCTTAGGCCA
ACATAAAGGCCCCATCTTTGCCTTGAAATGGAACCGAAAGGGGAATTACATTTTGAGTGCTGGTGTAGAC
AAAACAACAATAATTTGGGATGCCCACACAGGAGAAGCCAAACAGCAGTTTCCTTTTCATTCAGCCCCTG
CCCTTGATGTGGACTGGCAGAACAACACGACCTTTGCCTCCTGTAGCACAGACATGTGTATCCATGTGTG
CAGGCTCGGCTGTGACCGCCCAGTCAAAACCTTCCAGGGACACACAAACGAGGTCAACGCCATCAAATGG
GATCCGTCTGGAATGTTGCTGGCATCCTGCTCGGATGACATGACATTGAAGATCTGGAGCATGAAACAGG
AGGTGTGCATCCATGATCTTCAGGCTCACAATAAAGAGATCTACACCATCAAGTGGAGCCCCACTGGGCC
CGCCACCAGCAACCCAAACTCCAACATCATGTTGGCAAGTGCTTCGTTTGATTCTACGGTGCGACTGTGG
GACATAGAACGAGGCGTCTGCACCCACACGCTCACGAAGCATCAGGAGCCTGTCTATAGCGTAGCTTTCA
GCCCTGATGGGAAGTACTTGGCCAGTGGATCCTTCGACAAGTGCGTCCATATCTGGAATACTCAGAGTGG
AAATCTTGTCCACAGCTACCGAGGCACTGGCGGCATCTTCGAGGTGTGCTGGAACGCCCGAGGAGACAAA
GTGGGTGCCAGCGCGTCCGACGGCTCTGTGTGTGTTTTGGATCTGCGGAAGTAA

Translation (577 aa):
MTELAGASSSCCHRPAGRGAMQSVLHHFQRLRGREGGSHFINTSSPRGEAKMSITSDEVNFLVYRYLQES
GFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMP
DVVQTRQQAFREKLAQQQASAAAAAAAATAAATAATTTSAGVSHQNPSKNREATVNGEENRAHSVNNHAK
PMEIDGEVEIPSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIRE
GGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNRKGNYILSAGVD
KTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKW
DPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLW
DIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRGTGGIFEVCWNARGDK
VGASASDGSVCVLDLRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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