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Report for CCDS9755.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9755.1 Public Homo sapiens 14 SNAPC1 24 110 108 CCDS HistoryNCBI Gene:6617Re-query CCDS DB by CCDS ID:9755.1Re-query CCDS DB by GeneID:6617See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9755.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216294.5 ENSP00000216294.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216294.5Link to Ensembl Protein Viewer:ENSP00000216294.4Re-query CCDS DB by Nucleotide ID:ENST00000216294Re-query CCDS DB by Protein ID:ENSP00000216294
Original member Current member NCBI NM_003082.4 NP_003073.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003082.4Link to Protein Sequence:NP_003073.1Re-query CCDS DB by Nucleotide ID:NM_003082Re-query CCDS DB by Protein ID:NP_003073Link to BLAST:NP_003073.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003073.1 368 Q16533 368 100% 0 0

Chromosomal Locations for CCDS 9755.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 61762461 61762588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61766876 61767035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61767212 61767352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61768636 61768740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61776095 61776253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61778072 61778140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61778848 61778910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61782247 61782397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61792807 61792902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 61794949 61794983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1107 nt):
ATGGGGACTCCTCCCGGCCTGCAGACCGACTGCGAGGCGCTGCTCAGCCGCTTCCAGGAGACGGACAGTG
TACGCTTCGAGGACTTCACGGAGCTCTGGAGAAACATGAAGTTCGGGACTATCTTCTGTGGCAGAATGAG
AAATTTAGAAAAGAACATGTTTACAAAAGAAGCTTTAGCTTTGGCTTGGCGATATTTTTTACCTCCATAC
ACCTTCCAGATCAGAGTTGGTGCTTTGTATCTGCTATATGGATTATATAATACCCAACTGTGTCAACCAA
AACAAAAGATCAGAGTTGCCCTGAAGGATTGGGATGAAGTTTTAAAATTTCAGCAAGATTTAGTAAATGC
ACAGCATTTTGATGCAGCTTATATTTTTAGGAAGCTACGACTAGACAGAGCATTTCACTTTACAGCAATG
CCCAAATTGCTGTCATATAGGATGAAGAAAAAAATTCACCGAGCTGAAGTTACAGAAGAATTTAAGGACC
CAAGTGATCGTGTGATGAAACTTATCACTTCTGATGTATTAGAGGAAATGCTGAATGTTCATGATCATTA
TCAGAACATGAAACATGTAATTTCAGTTGATAAGTCCAAGCCAGATAAAGCCCTCAGCTTGATAAAGGAT
GATTTTTTTGACAATATTAAGAACATAGTTTTGGAGCATCAGCAGTGGCACAAAGACAGAAAGAATCCAT
CCTTAAAGTCAAAAACTAATGATGGAGAAGAAAAAATGGAAGGAAATTCACAAGAAACGGAGAGATGTGA
AAGGGCAGAATCATTAGCGAAAATAAAATCAAAGGCCTTTTCAGTTGTCATACAGGCATCCAAATCAAGA
AGGCATCGTCAAGTCAAACTCGACTCTTCTGACTCTGATTCTGCATCTGGTCAAGGGCAAGTCAAAGCAA
CTAGGAAAAAAGAGAAGAAAGAAAGATTGAAACCAGCAGGAAGGAAGATGTCTCTCAGAAACAAAGGCAA
TGTGCAGAATATACACAAGGAAGATAAACCTTTAAGTCTGAGTATGCCTGTAATTACAGAAGAAGAAGAG
AATGAAAGTTTGAGTGGAACAGAGTTCACTGCATCCAAGAAGAGGAGAAAACACTGA

Translation (368 aa):
MGTPPGLQTDCEALLSRFQETDSVRFEDFTELWRNMKFGTIFCGRMRNLEKNMFTKEALALAWRYFLPPY
TFQIRVGALYLLYGLYNTQLCQPKQKIRVALKDWDEVLKFQQDLVNAQHFDAAYIFRKLRLDRAFHFTAM
PKLLSYRMKKKIHRAEVTEEFKDPSDRVMKLITSDVLEEMLNVHDHYQNMKHVISVDKSKPDKALSLIKD
DFFDNIKNIVLEHQQWHKDRKNPSLKSKTNDGEEKMEGNSQETERCERAESLAKIKSKAFSVVIQASKSR
RHRQVKLDSSDSDSASGQGQVKATRKKEKKERLKPAGRKMSLRNKGNVQNIHKEDKPLSLSMPVITEEEE
NESLSGTEFTASKKRRKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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