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Report for CCDS9165.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9165.1 Public Homo sapiens 12 RASAL1 24 110 108 CCDS HistoryNCBI Gene:8437Re-query CCDS DB by CCDS ID:9165.1Re-query CCDS DB by GeneID:8437See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9165.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261729.9 ENSP00000261729.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000261729.9Link to Ensembl Protein Viewer:ENSP00000261729.5Re-query CCDS DB by Nucleotide ID:ENST00000261729Re-query CCDS DB by Protein ID:ENSP00000261729
Original member Current member NCBI NM_001394085.1 NP_001381014.1 Accepted alive Link to Nucleotide Sequence:NM_001394085.1Link to Protein Sequence:NP_001381014.1Re-query CCDS DB by Nucleotide ID:NM_001394085Re-query CCDS DB by Protein ID:NP_001381014Link to BLAST:NP_001381014.1
Original member Current member NCBI NM_004658.3 NP_004649.2 Accepted alive Link to Nucleotide Sequence:NM_004658.3Link to Protein Sequence:NP_004649.2Re-query CCDS DB by Nucleotide ID:NM_004658Re-query CCDS DB by Protein ID:NP_004649Link to BLAST:NP_004649.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001381014.1 804 O95294-1 804 100% 0 0
NP_004649.2 804 O95294-1 804 100% 0 0

Chromosomal Locations for CCDS 9165.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 113099929 113100068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113100628 113100680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113101889 113102009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113103946 113104081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113104161 113104298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113105714 113105883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113107097 113107241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113108085 113108222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113112086 113112278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113114800 113114912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113115200 113115264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113115635 113115788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113115934 113116051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113117073 113117161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113119128 113119259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113119362 113119443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113121509 113121638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113127812 113127873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113128065 113128178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113130885 113130941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113135398 113135462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2415 nt):
ATGGCCAAGAGCAGCTCCCTGAATGTTCGCGTGGTGGAGGGCCGCGCGCTGCCTGCCAAGGACGTGTCTG
GGAGCAGCGACCCCTACTGCCTAGTGAAAGTGGACGACGAGGTGGTGGCCAGGACAGCTACTGTCTGGAG
GAGCCTGGGCCCCTTCTGGGGGGAGGAGTACACGGTGCACCTGCCTCTGGATTTCCACCAGCTGGCCTTC
TACGTGCTGGATGAGGACACTGTCGGGCACGACGACATCATCGGCAAGATCTCGCTGAGCAGGGAGGCGA
TTACAGCCGACCCCCGAGGGATTGACAGCTGGATTAACTTGAGCCGAGTGGACCCAGATGCAGAAGTGCA
GGGTGAGATCTGCCTGTCAGTGCAGATGCTGGAGGATGGGCAGGGCCGCTGCCTTCGCTGCCATGTGCTT
CAGGCCAGGGACCTGGCTCCCAGAGACATCTCTGGCACATCTGACCCATTTGCACGTGTGTTTTGGGGCA
GCCAGAGCTTGGAGACCTCAACCATCAAGAAGACTCGCTTCCCGCACTGGGATGAAGTGCTGGAGCTGCG
GGAGATGCCAGGTGCCCCGTCCCCACTGCGGGTGGAGCTCTGGGACTGGGACATGGTGGGCAAGAATGAC
TTCTTGGGCATGGTGGAGTTCTCTCCAAAGACCCTCCAGCAGAAGCCACCTAAAGGCTGGTTCCGCCTCC
TGCCCTTTCCCAGAGCCGAGGAGGATTCTGGGGGGAACCTGGGTGCCCTGCGAGTGAAGGTACGCCTGAT
TGAGGACCGCGTCCTGCCCTCCCAGTGCTACCAGCCTCTCATGGAGCTGCTCATGGAGTCTGTGCAGGGG
CCAGCAGAGGAGGACACTGCTAGCCCCTTGGCTTTGCTGGAAGAGCTGACCTTGGGGGACTGCCGCCAGG
ACCTTGCCACCAAGCTGGTGAAACTCTTTCTTGGCCGGGGACTGGCTGGGCGCTTTCTGGACTATCTCAC
CCGGCGTGAGGTGGCTCGGACCATGGACCCCAACACCCTCTTCCGTTCTAACTCCCTGGCATCCAAGTCG
ATGGAACAGTTTATGAAGCTCGTGGGCATGCCCTACCTGCACGAGGTCCTGAAGCCTGTGATTAGCCGTG
TCTTTGAGGAGAAGAAGTACATGGAGCTGGATCCCTGCAAGATGGACCTGGGCCGCACCCGGAGGATCTC
CTTCAAAGGCGCACTCTCGGAGGAGCAGATGCGGGAGACCAGCCTGGGGCTGCTGACGGGCTACCTGGGG
CCCATCGTGGACGCCATCGTGGGCTCCGTGGGGCGCTGCCCGCCCGCCATGCGCCTCGCCTTCAAGCAGC
TGCACCGGCGAGTGGAGGAGCGCTTCCCCCAGGCCGAGCACCAGGATGTGAAGTACCTGGCCATCAGTGG
ATTTCTCTTCTTGCGATTCTTCGCACCTGCCATCCTTACCCCAAAGCTGTTTGACCTTCGGGACCAACAC
GCGGACCCCCAGACTAGCCGCTCACTGCTGTTGCTTGCCAAGGCTGTGCAGAGCATTGGAAACCTGGGCC
AGCAGCTGGGCCAAGGCAAGGAACTGTGGATGGCCCCCCTGCACCCCTTCCTGCTGCAGTGTGTCTCACG
TGTGAGAGACTTCCTGGACCGGCTGGTGGATGTGGATGGGGATGAAGCTGGTGTCCCAGCCAGGGCCCTG
TTCCCGCCCTCGGCCATTGTTCGAGAAGGCTATCTGCTGAAGCGCAAGGAGGAGCCTGCCGGCCTGGCCA
CGCGCTTTGCCTTCAAGAAGCGCTACGTCTGGCTCAGCGGGGAGACCCTCTCCTTCTCCAAGAGTCCTGA
GTGGCAGATGTGTCACTCCATCCCCGTGTCTCACATCCGCGCCGTGGAGCGCGTAGACGAGGGCGCCTTC
CAACTGCCCCACGTGATGCAGGTGGTGACGCAGGACGGCACGGGGGCGCTGCACACCACCTACCTCCAGT
GCAAGAATGTGAATGAGCTCAACCAGTGGCTCTCGGCCTTGCGCAAGGCCAGCGCCCCCAACCCGAACAA
GCTGGCCGCCTGCCACCCCGGTGCCTTCCGCAGCGCGCGCTGGACCTGCTGCCTCCAGGCTGAGCGCTCA
GCCGCCGGCTGCAGCCGTACACACTCAGCTGTCACCCTGGGGGACTGGAGTGACCCACTGGATCCTGATG
CTGAGGCCCAGACAGTGTATCGGCAGCTGCTCCTGGGGCGGGACCAGCTCAGGCTGAAATTACTGGAGGA
TTCTAACATGGATACAACTCTGGAGGCAGACACAGGGGCCTGTCCTGAGGTCCTGGCCCGGCAAAGAGCA
GCAACTGCCCGCCTGCTGGAGGTGCTCGCAGACCTGGATCGTGCCCACGAGGAGTTCCAGCAGCAGGAGC
GAGGGAAGGCGGCCCTGGGCCCCCTTGGCCCCTAA

Translation (804 aa):
MAKSSSLNVRVVEGRALPAKDVSGSSDPYCLVKVDDEVVARTATVWRSLGPFWGEEYTVHLPLDFHQLAF
YVLDEDTVGHDDIIGKISLSREAITADPRGIDSWINLSRVDPDAEVQGEICLSVQMLEDGQGRCLRCHVL
QARDLAPRDISGTSDPFARVFWGSQSLETSTIKKTRFPHWDEVLELREMPGAPSPLRVELWDWDMVGKND
FLGMVEFSPKTLQQKPPKGWFRLLPFPRAEEDSGGNLGALRVKVRLIEDRVLPSQCYQPLMELLMESVQG
PAEEDTASPLALLEELTLGDCRQDLATKLVKLFLGRGLAGRFLDYLTRREVARTMDPNTLFRSNSLASKS
MEQFMKLVGMPYLHEVLKPVISRVFEEKKYMELDPCKMDLGRTRRISFKGALSEEQMRETSLGLLTGYLG
PIVDAIVGSVGRCPPAMRLAFKQLHRRVEERFPQAEHQDVKYLAISGFLFLRFFAPAILTPKLFDLRDQH
ADPQTSRSLLLLAKAVQSIGNLGQQLGQGKELWMAPLHPFLLQCVSRVRDFLDRLVDVDGDEAGVPARAL
FPPSAIVREGYLLKRKEEPAGLATRFAFKKRYVWLSGETLSFSKSPEWQMCHSIPVSHIRAVERVDEGAF
QLPHVMQVVTQDGTGALHTTYLQCKNVNELNQWLSALRKASAPNPNKLAACHPGAFRSARWTCCLQAERS
AAGCSRTHSAVTLGDWSDPLDPDAEAQTVYRQLLLGRDQLRLKLLEDSNMDTTLEADTGACPEVLARQRA
ATARLLEVLADLDRAHEEFQQQERGKAALGPLGP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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