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Report for CCDS86254.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86254.1 Public Homo sapiens 11 GRAMD1B 24 110 108 CCDS HistoryNCBI Gene:57476Re-query CCDS DB by CCDS ID:86254.1Re-query CCDS DB by GeneID:57476See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86254.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000533341.3 ENSP00000490665.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000533341.3Link to Ensembl Protein Viewer:ENSP00000490665.1Re-query CCDS DB by Nucleotide ID:ENST00000533341Re-query CCDS DB by Protein ID:ENSP00000490665
Original member Current member NCBI NM_001354837.2 NP_001341766.1 Accepted alive Link to Nucleotide Sequence:NM_001354837.2Link to Protein Sequence:NP_001341766.1Re-query CCDS DB by Nucleotide ID:NM_001354837Re-query CCDS DB by Protein ID:NP_001341766Link to BLAST:NP_001341766.1

Chromosomal Locations for CCDS 86254.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 123430793 123431166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 123435434 123435467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (408 nt):
ATGCCGGCGGCCAACATGATGGAGAACCGGCCGCTGCCCGCCCTGCAGGTGCCCGAGCCGCAGGGTGCGC
CC
GAGGGCAGCCCGGTCTGGTCCAGTTCGTCGACCCCCACGCTTCGCCGCCGGCGCTTCAAGATGCGCCG
C
ATGAAGAACGTACAGGAGCAGAGCCTGGAGGCCGGGCTGGCCCGGGACCTGCCCGCCGTCTTGGCCCCC
GGC
AAGGAGTTCCTGCAGCTGCCGTCCATCGAGATCACGCCCTCCAGCGACGAGGACACCCCGTGGTCCA
AC
TGCTCCACACCCAGCGCGTCCCCGCGCCGAAAACGCTTCCTCCTCCGCAAGTGGCTGAGGGTGAGGGA
G
CGGAAGGAGTGCAGTGAAAGCAGCTCAAGCTTGCGGATTTTCACTGCACAAAGTTGA


Translation (135 aa):
MPAANMMENRPLPALQVPEPQGAPEGSPVWSSSSTPTLRRRRFKMRRMKNVQEQSLEAGLARDLPAVLAP
G
KEFLQLPSIEITPSSDEDTPWSNCSTPSASPRRKRFLLRKWLRVRERKECSES
SSSLRIFTAQS



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser