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Report for CCDS85317.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85317.1 Public Mus musculus 7 Fam169b 23 108 98 CCDS HistoryNCBI Gene:434197Re-query CCDS DB by CCDS ID:85317.1Re-query CCDS DB by GeneID:434197See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85317.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000125685.8 ENSMUSP00000146700.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000125685.8Link to Ensembl Protein Viewer:ENSMUSP00000146700.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000125685Re-query CCDS DB by Protein ID:ENSMUSP00000146700
Original member Current member NCBI NM_001013811.3 NP_001013833.1 Accepted alive Link to Nucleotide Sequence:NM_001013811.3Link to Protein Sequence:NP_001013833.1Re-query CCDS DB by Nucleotide ID:NM_001013811Re-query CCDS DB by Protein ID:NP_001013833Link to BLAST:NP_001013833.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013833.1 337 Q8CHT6 337 100% 0 0

Chromosomal Locations for CCDS 85317.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 68273876 68273891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68300833 68300963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68304552 68304651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68321820 68321905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68329222 68329399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68350234 68350416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68353609 68353743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68358185 68358288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 68361242 68361322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1014 nt):
ATGGCAGTTTATAAAGAGGCTTACCCTGTGGACATCCTGGAGGATGACGCGGAGGGCTATCAGGCAGCAG
CCGAGGCTTACTATGAGATGCTCAGGGAAGGAGCCCAGACCTCAGCAGAGGTTATCTCCCTTTCCACTGG
GGAGCAGGTCAGACTTGAGACTTCATCTCTTTGTTTTTGCACGATATACCGTGATGAACCTCAACATAAA
ATACTGGGTTTGGTTAATCCCCAGGACACAAAGACAGTTGTGGCTGTTTACTTAAAGGAATCCTGGTGGT
CCATCGAAGACATCCTAAGAACTTCTGATCCCACGCGGGAAGGGCTCATGAAGGTTCAGTCCTTTGGGGA
AAGGATTGTTCTCTTTGTTCTCAACGTCATTGTTTTTGGAAGACTGGAGAGAAGGCTGCACATCGATGAC
ATGTTTTTCTTACCTCACCCTGCGAAGGAGCAAGCTAAGATTCTGTGGAAAGATGGAGCCGCGGTTGCAT
TTTACTCAGTCAAAATGAAAGGCAGCCTCTGTGGTGATGGTACCGGCACATGCTACCTGCTGCCTGTCTT
GGACACCGTGTTTGTGAGGAGGAAGAACCGTTGCCAAGGCCTGGGGACAGCCATGCTGAGGGACTTCTGT
GACACCTTTCAAGGAGACGAAGCTCTGGGTATCAGTTGTCCGATATCTCCTGCAATGTACAGAGTCCTCA
GGCAGTTCCTGTTGACCTGTCCAGGCGAGAGAGGGCGCTTGTGGGAGGTGGAGCCCCCGGGGGCCTGGGG
CCAGCAGCGTGTTAACATCTGGCTCAAGGTTTATCTTCAGGAGCGGAGACTTCAAGATGGGAGCACCGTG
CACCCTAAATGTTCTGAAGAGGACACGGACACTCCCGGGCAGGCTTCTCAGGAGGATGGACCCACACAGT
TTAATCATGGAGAAAGCCACAAGGAGTGGGCTGTTGGAGAACCGGAGAGGACACAGAATGGCCGACGCTG
TGCGCAAGTGTGTGAGGAAGCGCGTCAGGTGTGA

Translation (337 aa):
MAVYKEAYPVDILEDDAEGYQAAAEAYYEMLREGAQTSAEVISLSTGEQVRLETSSLCFCTIYRDEPQHK
ILGLVNPQDTKTVVAVYLKESWWSIEDILRTSDPTREGLMKVQSFGERIVLFVLNVIVFGRLERRLHIDD
MFFLPHPAKEQAKILWKDGAAVAFYSVKMKGSLCGDGTGTCYLLPVLDTVFVRRKNRCQGLGTAMLRDFC
DTFQGDEALGISCPISPAMYRVLRQFLLTCPGERGRLWEVEPPGAWGQQRVNIWLKVYLQERRLQDGSTV
HPKCSEEDTDTPGQASQEDGPTQFNHGESHKEWAVGEPERTQNGRRCAQVCEEARQV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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