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Report for CCDS82200.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82200.1 Public Homo sapiens 17 NAT9 24 110 108 CCDS HistoryNCBI Gene:26151Re-query CCDS DB by CCDS ID:82200.1Re-query CCDS DB by GeneID:26151See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82200.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000578822.5 ENSP00000462835.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000578822.5Link to Ensembl Protein Viewer:ENSP00000462835.1Re-query CCDS DB by Nucleotide ID:ENST00000578822Re-query CCDS DB by Protein ID:ENSP00000462835
Original member Current member NCBI NM_001305082.2 NP_001292011.1 Accepted alive Link to Nucleotide Sequence:NM_001305082.2Link to Protein Sequence:NP_001292011.1Re-query CCDS DB by Nucleotide ID:NM_001305082Re-query CCDS DB by Protein ID:NP_001292011Link to BLAST:NP_001292011.1

Chromosomal Locations for CCDS 82200.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 74771724 74771858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74771960 74772054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74772218 74772277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74772896 74773039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74773576 74773688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74775622 74775713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (639 nt):
ATGCAGGCTGCTACCATGAGGTTGAATCAGAACACCTTGCTGCTGGGGAAGAAGGTGGTCCTTGTACCCT
ACACCTCGGAGCATGTGCCCAGCAGGTACCACGAGTGGATGAAATCAGAGGAGCTGCAGCGTTTGACAGC
CTCGGAGCCGCTGACCCTGGAGCAGGAGTATGCCATGCAGTGCAGCTGGCAGGAAGATGCAGACAAGTGT
ACCTTCATTGTGCTGGATGCCGAGAAGTGGCAGGCCCAGCCAGGCGCCACCGAAGAGAGCTGCATGGTGG
GAGATGTGAACCTCTTCCTCACAGATCTAGAAGACCTCACCTTGGGGGAGATCGAGGTCATGATTGCAGA
GCCCAGCTGCAGGGGTAAGGGCCTTGGCACTGAGGCCGTTCTCGCGATGCTGTCTTACGGAGTGACCACG
CTAGGTCTGACCAAGTTTGAGGCTAAAATTGGGCAAGGAAATGAACCAAGCATCCGGATGTTCCAGAAAC
TTCACTTTGAGCAGGTGGCTACGAGCAGTGTTTTTCAGGAGGTGACCCTCAGACTGACAGTGAGTGAGTC
CGAGCATCAGTGGCTTCTGGAGCAGACCAGCCACGTGGAAGAGAAGCCTTACAGAGATGGGTCGGCAGAG
CCCTGCTGA

Translation (212 aa):
MQAATMRLNQNTLLLGKKVVLVPYTSEHVPSRYHEWMKSEELQRLTASEPLTLEQEYAMQCSWQEDADKC
TFIVLDAEKWQAQPGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAEPSCRGKGLGTEAVLAMLSYGVTT
LGLTKFEAKIGQGNEPSIRMFQKLHFEQVATSSVFQEVTLRLTVSESEHQWLLEQTSHVEEKPYRDGSAE
PC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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