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Report for CCDS8095.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8095.1 Public Homo sapiens 11 FAU 24 110 108 CCDS HistoryNCBI Gene:2197Re-query CCDS DB by CCDS ID:8095.1Re-query CCDS DB by GeneID:2197See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8095.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000531743.5 ENSP00000431822.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000531743.5Link to Ensembl Protein Viewer:ENSP00000431822.1Re-query CCDS DB by Nucleotide ID:ENST00000531743Re-query CCDS DB by Protein ID:ENSP00000431822
Original member Current member EBI ENST00000527548.5 ENSP00000434440.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000527548.5Link to Ensembl Protein Viewer:ENSP00000434440.1Re-query CCDS DB by Nucleotide ID:ENST00000527548Re-query CCDS DB by Protein ID:ENSP00000434440
Original member Current member EBI ENST00000529639.6 ENSP00000435370.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000529639.6Link to Ensembl Protein Viewer:ENSP00000435370.1Re-query CCDS DB by Nucleotide ID:ENST00000529639Re-query CCDS DB by Protein ID:ENSP00000435370
Original member Current member NCBI NM_001997.5 NP_001988.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001997.5Link to Protein Sequence:NP_001988.1Re-query CCDS DB by Nucleotide ID:NM_001997Re-query CCDS DB by Protein ID:NP_001988Link to BLAST:NP_001988.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001988.1 133 P62861 133 100% 0 0

Chromosomal Locations for CCDS 8095.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65120681 65120806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65120981 65121036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65121500 65121644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65121739 65121813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (402 nt):
ATGCAGCTCTTTGTCCGCGCCCAGGAGCTACACACCTTCGAGGTGACCGGCCAGGAAACGGTCGCCCAGA
TC
AAGGCTCATGTAGCCTCACTGGAGGGCATTGCCCCGGAAGATCAAGTCGTGCTCCTGGCAGGCGCGCC
C
CTGGAGGATGAGGCCACTCTGGGCCAGTGCGGGGTGGAGGCCCTGACTACCCTGGAAGTAGCAGGCCGC
ATG
CTTGGAGGTAAAGTCCATGGTTCCCTGGCCCGTGCTGGAAAAGTGAGAGGTCAGACTCCTAAGGTGG
CC
AAACAGGAGAAGAAGAAGAAGAAGACAGGTCGGGCTAAGCGGCGGATGCAGTACAACCGGCGCTTTGT
C
AACGTTGTGCCCACCTTTGGCAAGAAGAAGGGCCCCAATGCCAACTCTTAA


Translation (133 aa):
MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEALTTLEVAGR
M
LG
GKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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