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Report for CCDS80868.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80868.1 Public Mus musculus 8 Plpp5 23 108 98 CCDS HistoryNCBI Gene:71910Re-query CCDS DB by CCDS ID:80868.1Re-query CCDS DB by GeneID:71910See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80868.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000139836.7 ENSMUSP00000122437.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000139836.7Link to Ensembl Protein Viewer:ENSMUSP00000122437.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000139836Re-query CCDS DB by Protein ID:ENSMUSP00000122437
Original member Current member NCBI NM_001293703.1 NP_001280632.1 Accepted alive Link to Nucleotide Sequence:NM_001293703.1Link to Protein Sequence:NP_001280632.1Re-query CCDS DB by Nucleotide ID:NM_001293703Re-query CCDS DB by Protein ID:NP_001280632Link to BLAST:NP_001280632.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001280632.1 226 Q3UMZ3-2 226 100% 0 0

Chromosomal Locations for CCDS 80868.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 25720090 25720151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 25720267 25720375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 25720555 25720645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 25721174 25721237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 25721662 25721786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 25722430 25722600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 25723031 25723089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (681 nt):
ATGGGGACGGCGGCCCTGGGAGCCGAGCTGGGCGTGCGGGTCCTGCTCTTTGTGGCTTTCCTGGTGACCG
AGCTGCTCCCTCCCTTCCAGCGGCGGATCCAGCCCGAGGAGCTGTGGCTCTACAGGAACCCGTACGTGGA
GGCGGAATACTTCCCCACCGGCCGCATGTTTGTCATTGCCTTTCTCACTCCACTGTCCCTGATCTTCCTC
GCCAAGTTTCTAAGGAAAGCTGACGCTACCGACAGCAAGCAAGCCTGCCTCGCTGCCAGCCTTGCCCTAG
CTCTGAATGGTGTCTTTACCAACATAATCAAACTGATAGTGGGCAGGCCCCGCCCAGACTTCTTCTACCG
CTGCTTCCCTGATGGGCTGGCCCATTCTGATCTGACGTGCACGGGGGACGAGGATGTGGTGAACGAGGGC
CGAAAGAGCTTCCCCAGTGGACATTCTTCCTTTGCATTTGCTGGTCTGGCCTTTGCTTCCTTCTACCTGG
CAGGGAAGTTACACTGCTTCACGCCACAAGGCCGAGGGAAGTCCTGGAGGCTCTGTGCCTTTCTGTCACC
TTTACTCTTTGCAGCCGTGATTGCACTGTCCCGCACGTGTGACTACAAGCACCACTGGCAAGGCTGGTAC
AAGGACATGCACAGATGCTCTCAGCTTTTTATGAGGGTGCTGGGGATTTGA

Translation (226 aa):
MGTAALGAELGVRVLLFVAFLVTELLPPFQRRIQPEELWLYRNPYVEAEYFPTGRMFVIAFLTPLSLIFL
AKFLRKADATDSKQACLAASLALALNGVFTNIIKLIVGRPRPDFFYRCFPDGLAHSDLTCTGDEDVVNEG
RKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRLCAFLSPLLFAAVIALSRTCDYKHHWQGWY
KDMHRCSQLFMRVLGI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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