NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
The CCDS database will be unavailable on Thursday, April 25, 2024, starting at 7:00 a.m. EDT for up to 120 minutes.
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS80800.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80800.1 Public Mus musculus 7 Xpo6 23 108 98 CCDS HistoryNCBI Gene:74204Re-query CCDS DB by CCDS ID:80800.1Re-query CCDS DB by GeneID:74204See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80800.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000168189.7 ENSMUSP00000130527.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168189.7Link to Ensembl Protein Viewer:ENSMUSP00000130527.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000168189Re-query CCDS DB by Protein ID:ENSMUSP00000130527
Original member Current member NCBI NM_001311143.2 NP_001298072.1 Accepted alive Link to Nucleotide Sequence:NM_001311143.2Link to Protein Sequence:NP_001298072.1Re-query CCDS DB by Nucleotide ID:NM_001311143Re-query CCDS DB by Protein ID:NP_001298072Link to BLAST:NP_001298072.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001298072.1 1125 Q924Z6-1 1125 100% 0 0

Chromosomal Locations for CCDS 80800.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 126102289 126102390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126104704 126104934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126105101 126105199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126107071 126107232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126108452 126108623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126108786 126108900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126109914 126110069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126112752 126112941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126113657 126113803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126115808 126115952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126120357 126120449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126124372 126124531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126128227 126128296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126129548 126129640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126131026 126131134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126140565 126140674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126149234 126149360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126152826 126153279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126156724 126156801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126160861 126161020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126169129 126169326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126171030 126171142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126174158 126174248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 126199899 126199901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3378 nt):
ATGGCATCAGAAGAAGCCTCCCTCAGGGCGTTGGAAAGCCTGATGACGGAATTTTTCCATGACTGCACAA
CCAATGAAAGGAAGCGGGAGATAGAGGAGCTTCTTAATAACTTTGCCCAGCAAGTAGGAGCTTGGAGATT
CTGCTTATATTTTCTGTCCAGCACAAGGAATGACTATGTAATGATGTACAGCTTAACGGTTTTTGAGAAT
CTAATCAATAAAATGTGGCTTGGGGTCCCATCTCAGGATAAGATGGAAATCCGTAGCTGCTTGCCCAAAC
TTCTCTTGGCTCACCATAAAACCTTACCTTACTTTATTCGGAATAAACTCTGCAAAGTTATCGTTGATAT
TGGACGCCAAGATTGGCCCATGTTCTACCATGACTTTTTCACTAACATTTTACAGTTGATCCAGTCCCCT
GTGACAACCCCCCTTGGACTGATCATGCTGAAGACAACTTCGGAAGAGCTAGCTTGTCCACGTGAGGACC
TCAGCGTGGCTCGGAAGGAGGAGTTGCGGAAGCTGCTGCTGGACCAGGTGCAGACAGTGCTTGGGCTCTT
GACAGGTATCTTGGAAACTGTCTGGGACAAACACAGTGTTACTGCTGCCACCCCACCACCATCCCCGACG
TCAGGAGAAAGTGGTGATTTACTGAGTAACCTGTTGCAGAGTCCTAGTTCAGCCAAACTGCTGCACCAGC
CCATCCCCATCCTGGATGTGGAGAGTGAGTATGTCTGTTCCCTGGCCTTGGAGTGCCTGGCCCACCTCTT
CAGTTGGATTCCTCTGTCTGCCAGCATCACCCCATCCCTCCTCACCACTATCTTCCACTTTGCTCGATTT
GGCTGCGATACCCGGGCCAGAAAGATGGCATCAGTGAATGGCAGCAGCCAGAACTGTGTTTTGGGTCAGG
AGCGTGGCCGACTTGGGGTCTTGGCCATGTCCTGCATCAATGAACTCATGTCCAAGAACTGTGTGCCTAT
GGAATTTGAGGAATACTTATTGCGAATGTTTCAACAAACCTTCTACCTCCTGCAAAAAATCACCAAGGAT
AACAATGCCCACACGGTGAAGAGCAGGCTAGAGGAACTCGATGAGAGTTACATTGAGAAGTTTACTGACT
TCCTGCGGCTCTTTGTGAGTGTTCACCTAAGAAGAATCGAGTCCTATTCCCAGTTCCCGGTGGTGGAGTT
CTTGACCCTTCTGTTCAAGTACACGTTTCATCAGCCTACTCATGAAGGTTACTTCTCTTGTTTGGATATC
TGGACACTGTTTTTGGACTATCTGACAAGTAAAATTAAAAGTCGTCTCGGAGACAAGGAAGCAGTTCTCA
ACAGGTACGAAGATGCTCTGGTCCTCTTGCTTACAGAGGTGTTGAATCGAATCCAGTTCAGATACAACCA
GGCCCAACTCGAGGAGCTGGATGATGAGACCCTGGACGACGATCAGCAGACAGAGTGGCAGCGGTACTTA
CGCCAGAGCTTGGAGGTCGTGGCCAAAGTGATGGAGCTCCTTCCCACACACGCCTTCTCAACCCTGTTCC
CAGTTCTTCAGGACAATTTAGAAGTTTATTTGGGATTACAGCAATTTGTAGTTACTTCGGGGTCAGGACA
CAGGCTGAACATCACAGCGGAGAACGACTGCCGGCGTTTGCACTGTTCCCTGCGAGACTTGAGCTCCCTG
CTGCAGGCTGTGGGCCGATTAGCTGAATACTTCATTGGGGATGTGTTTGCTGCAAGGTTCAATGATGCTC
TCACAGTTGTGGAGAGGTTGGTCAAAGTTACTCTGTATGGATCTCAGATAAAACTGTACAACATTGAAAC
AGCTGTGCCATCAGTGTTGAAACCCGACCTCATTGATGTGCACGCTCAGTCACTTGCGGCTCTCCAGGCC
TACTCCCACTGGCTGGCGCAGTACTGCGGTGAAGCCCATCGACAGAACACACAGCAGTTTGTGACACTCA
TCTCTACCACAATGGACGCCATCACACCTCTCATCAGCACCAAGGTCCAAGACAAGTTGCTGCTGTCTGC
GTGCCACCTACTGGTCTCACTAGCCACCACCGTGCGGCCTGTCTTTCTGATCAGTATCCCTGCAGTGCAG
AAGGTGTTCAACAGCATCATTGATGCCTCTGCCCAGCGTCTAACAGATAAGGCGCAGGTGTTGGTTTGCC
GTGCACTTTCTAATACCTTGCTCCTTCCATGGCCAAATCTTCCTGAGAGTGAGCAGCAGTGGCCTCTGCG
CTCGATCAACCATGCCAGCCTCATCTCTGCACTCTCCCGGGACTACCACAGCCTGAAGCCCAGTGCTACT
GCCCCCCAGAGAAAGGTGCCACTTGGTGACACCAAAGTGATTATTCACCAGACACTTAGTGTCTTGGAAG
ATATCGTGGAGAATATTTCTGGGGAATCCACCAAGTCTCGACAGATCTGCTACCAGTCACTGCAGGAATC
TGTTCAGGTCTCCCTGGCCCTCTTTCCAGCTTTTATCCATCAGTCAGATGTGACTGACGAGATGCTGAGC
TTCTTCCTCACCTTGTTCCGAGGCCTTCGAGTACAGATGGGCGTGCCGTTCACAGAGCAGATCATACAGA
CTTTCCTCAACATGTTTACCAGAGAACAGTTGGCTGAGAGCATCCTCCATGAAGGCAGCACTGGCTGCCG
GGTGGTGGAGAAGTTCCTGAAGATCCTACAAGTGGTGGTTCAGGAGCCTGGCCAGGTGTTCAAGCCCTTC
CTCCCCAGCATTATCGCGCTGTGCATGGAGCAAGTGTACCCCATCATTGCTGAGCGCCCGTCCCCTGATG
TCAAGGCTGAGCTGTTTGAGCTCCTCTTTCGAACGCTCCATCACAACTGGCGGTACTTCTTCAAGTCCAC
TGTCCTCGCTAGCGTGCAGAGGGGCATCGCTGAGGAGCAGATGGAGAATGAGCCCCAGTTCAGTGCCATC
ATGCAGGCTTTTGGACAGTCCTTTCTTCAGCCTGACATCCACCTGTTCAAACAAAATCTCTTCTACTTGG
AGACTCTGAACACGAAGCAGAAACTATACCACAAAAAGATCTTCCGGACCACCATGCTGTTCCAGTTCGT
GAACGTGCTGCTCCAGGTCCTGGTTCATAAGTCTCATGACCTTCTGCAGGAGGAGATCGGCATTGCCATT
TACAACATGGCTTCTGTCGACTTTGATGGCTTCTTTGCAGCCTTTCTTCCAGAGTTCCTGACTAGCTGTG
ATGGTGTGGATGCCAATCAGAAAAACGTTCTGGGGCGGAATTTCAAGATGGATCGGGACCTACCATCGTT
CACCCAGAATGTGCACAGGCTGGTAAATGATCTCCGTTACTACCGACTCTGCAATGACAGCCTGCCCCCT
GGCACCGTGAAGCTCTAG

Translation (1125 aa):
MASEEASLRALESLMTEFFHDCTTNERKREIEELLNNFAQQVGAWRFCLYFLSSTRNDYVMMYSLTVFEN
LINKMWLGVPSQDKMEIRSCLPKLLLAHHKTLPYFIRNKLCKVIVDIGRQDWPMFYHDFFTNILQLIQSP
VTTPLGLIMLKTTSEELACPREDLSVARKEELRKLLLDQVQTVLGLLTGILETVWDKHSVTAATPPPSPT
SGESGDLLSNLLQSPSSAKLLHQPIPILDVESEYVCSLALECLAHLFSWIPLSASITPSLLTTIFHFARF
GCDTRARKMASVNGSSQNCVLGQERGRLGVLAMSCINELMSKNCVPMEFEEYLLRMFQQTFYLLQKITKD
NNAHTVKSRLEELDESYIEKFTDFLRLFVSVHLRRIESYSQFPVVEFLTLLFKYTFHQPTHEGYFSCLDI
WTLFLDYLTSKIKSRLGDKEAVLNRYEDALVLLLTEVLNRIQFRYNQAQLEELDDETLDDDQQTEWQRYL
RQSLEVVAKVMELLPTHAFSTLFPVLQDNLEVYLGLQQFVVTSGSGHRLNITAENDCRRLHCSLRDLSSL
LQAVGRLAEYFIGDVFAARFNDALTVVERLVKVTLYGSQIKLYNIETAVPSVLKPDLIDVHAQSLAALQA
YSHWLAQYCGEAHRQNTQQFVTLISTTMDAITPLISTKVQDKLLLSACHLLVSLATTVRPVFLISIPAVQ
KVFNSIIDASAQRLTDKAQVLVCRALSNTLLLPWPNLPESEQQWPLRSINHASLISALSRDYHSLKPSAT
APQRKVPLGDTKVIIHQTLSVLEDIVENISGESTKSRQICYQSLQESVQVSLALFPAFIHQSDVTDEMLS
FFLTLFRGLRVQMGVPFTEQIIQTFLNMFTREQLAESILHEGSTGCRVVEKFLKILQVVVQEPGQVFKPF
LPSIIALCMEQVYPIIAERPSPDVKAELFELLFRTLHHNWRYFFKSTVLASVQRGIAEEQMENEPQFSAI
MQAFGQSFLQPDIHLFKQNLFYLETLNTKQKLYHKKIFRTTMLFQFVNVLLQVLVHKSHDLLQEEIGIAI
YNMASVDFDGFFAAFLPEFLTSCDGVDANQKNVLGRNFKMDRDLPSFTQNVHRLVNDLRYYRLCNDSLPP
GTVKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH