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Report for CCDS78732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
78732.1 Public Mus musculus 1 Gpr161 23 108 98 CCDS HistoryNCBI Gene:240888Re-query CCDS DB by CCDS ID:78732.1Re-query CCDS DB by GeneID:240888See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 78732.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000111450.2 ENSMUSP00000107077.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000111450.2Link to Ensembl Protein Viewer:ENSMUSP00000107077.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000111450Re-query CCDS DB by Protein ID:ENSMUSP00000107077
Original member Current member NCBI NM_001310430.1 NP_001297359.1 Accepted alive Link to Nucleotide Sequence:NM_001310430.1Link to Protein Sequence:NP_001297359.1Re-query CCDS DB by Nucleotide ID:NM_001310430Re-query CCDS DB by Protein ID:NP_001297359Link to BLAST:NP_001297359.1

Chromosomal Locations for CCDS 78732.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 165306222 165306592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 165310269 165310993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 165317240 165317344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 165318749 165318868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 165321436 165321701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1587 nt):
ATGAGCCTCAACTCCTCCCTCAGCTACAGGAAGGAACTGAGCAACCTCACTGCAACAGAGGGTGGTGAAG
GGGGTGCCGTCTCTGAGTTCATCGCCATCATCATCATCACTGTCCTCGTCTGCCTGGGCAACCTGGTCAT
TGTAGTCACCTTGTACAAGAAGTCCTACCTCCTCACCCTCAGCAACAAGTTCGTCTTCAGCCTGACCTTG
TCCAACTTCCTGTTGTCGGTGCTGGTGCTGCCGTTCGTGGTGACTAGCTCCATCCGGAGGGAATGGATTT
TCGGCGTGGTTTGGTGCAACTTCTCTGCCCTCCTCTACCTGCTGATCAGCTCAGCCAGCATGCTCACGCT
TGGGGTCATTGCCATCGATCGCTACTACGCCGTCCTGTATCCAATGGTGTACCCCATGAAGATCACAGGG
AACCGAGCTGTGATGGCTCTCGTCTACATCTGGCTCCACTCTCTCATTGGCTGTCTGCCGCCCCTATTTG
GTTGGTCATCGGTGGAGTTTGATGAGTTCAAGTGGATGTGTGTGGCCGCGTGGCACCAGGAACCCGGCTA
CACCATTTTCTGGCAGATCTGGTGTGCCCTGTTCCCCTTTCTCATCATGCTAGTGTGCTACGGTTTCATC
TTCCGGGTGGCCAGGGTCAAGGCCCGAAAGGTGCACTGTGGCACGGTGGTCACTGTGGAGGAGGACTCTC
AGAGGAGCGGGAGGAAGAATTCTAGTACCTCCACTTCCTCCTCCGGCAGTAGGAGGAATGCCCTTCAAGG
AGTGGTCTATTCAGCTAACCAGTGCAAAGCCCTCATCACCATCCTGGTGGTCATTGGCGCCTTCATGGTC
ACCTGGGGCCCCTACATGGTTGTCATTACCTCAGAGGCACTCTGGGGGAAGAACTGTGTCTCCCCAACCC
TGGAGACTTGGGCCACATGGCTGTCCTTTACCAGTGCCATCTGCCACCCTCTGATCTACGGACTCTGGAA
CAAGACTGTGCGCAAGGAGCTCCTGGGCATGTGCTTTGGGGACCGTTATTACCGGGAATCCTTTGTGCAG
CGACAGAGGACCTCCAGGCTCTTCAGCATTTCCAACAGGATCACAGACTTGGGTCTGTCCCCACATCTCA
CGGCGCTCATGGCAGGCGGACAGTCCCTGGGACACAGCAGCAGCACCGGTGACACAGGCTTCAGCTACTC
TCAGGATTCAGGGACGGATGTGATGCTGTTGGAAGATGGCACTTCTGAGGACAACCCTCCCCAGCACTGC
ACTTGCCCACCCAAGAGGAGGAGCTCCGTGACATTTGAGGACGAAGTGGAACAGATCAAAGAGGCCGCCA
AGAACTCTCTTCTTCATGTGAAAGCTGAAGTACACAAATCCTTGGACAGTTACGCAGCCAGCTTGGCTAA
AGCCATTGAGGCTGAAGCCAAAATCAACTTATTTGGGGAGGAGGCTCTGCCAGGGGTCTTGTTCACAGCA
CGGACCGTCCCAGGGGCTGGCTTTGGGGGCCGTCGAGGCAGCAGAACTCTTGTGAATCAGAGGCTGCAGC
TACAGAGCATCAAAGAAGGCAATGTCTTAGCTGCAGAACAGAGATGA

Translation (528 aa):
MSLNSSLSYRKELSNLTATEGGEGGAVSEFIAIIIITVLVCLGNLVIVVTLYKKSYLLTLSNKFVFSLTL
SNFLLSVLVLPFVVTSSIRREWIFGVVWCNFSALLYLLISSASMLTLGVIAIDRYYAVLYPMVYPMKITG
NRAVMALVYIWLHSLIGCLPPLFGWSSVEFDEFKWMCVAAWHQEPGYTIFWQIWCALFPFLIMLVCYGFI
FRVARVKARKVHCGTVVTVEEDSQRSGRKNSSTSTSSSGSRRNALQGVVYSANQCKALITILVVIGAFMV
TWGPYMVVITSEALWGKNCVSPTLETWATWLSFTSAICHPLIYGLWNKTVRKELLGMCFGDRYYRESFVQ
RQRTSRLFSISNRITDLGLSPHLTALMAGGQSLGHSSSTGDTGFSYSQDSGTDVMLLEDGTSEDNPPQHC
TCPPKRRSSVTFEDEVEQIKEAAKNSLLHVKAEVHKSLDSYAASLAKAIEAEAKINLFGEEALPGVLFTA
RTVPGAGFGGRRGSRTLVNQRLQLQSIKEGNVLAAEQR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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