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Report for CCDS74751.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74751.1 Public Homo sapiens 20 RTEL1 24 110 108 CCDS HistoryNCBI Gene:51750Re-query CCDS DB by CCDS ID:74751.1Re-query CCDS DB by GeneID:51750See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74751.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000318100.9 ENSP00000322287.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000318100.9Link to Ensembl Protein Viewer:ENSP00000322287.5Re-query CCDS DB by Nucleotide ID:ENST00000318100Re-query CCDS DB by Protein ID:ENSP00000322287
Original member Current member NCBI NM_001283010.1 NP_001269939.1 Accepted alive Link to Nucleotide Sequence:NM_001283010.1Link to Protein Sequence:NP_001269939.1Re-query CCDS DB by Nucleotide ID:NM_001283010Re-query CCDS DB by Protein ID:NP_001269939Link to BLAST:NP_001269939.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269939.1 996 Q9NZ71-9 996 100% 0 0

Chromosomal Locations for CCDS 74751.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 63667524 63667553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63672556 63672621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63673940 63674093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63678145 63678183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63678268 63678346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63679849 63679946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63680664 63680719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63685523 63685597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63685791 63685872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63687638 63687770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63687937 63688050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63688139 63688179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63688301 63688386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63688528 63688605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63689055 63689132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63689502 63689648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63689750 63689865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63690087 63690210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63690294 63690441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63690805 63690947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63691742 63691837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63692805 63693003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63693143 63693283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63694372 63694488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63694741 63694974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63695066 63695221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63695328 63695480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63695778 63695785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2991 nt):
ATGCCGTACAATTACTTGTTGGATGCCAAGAGCCGCAGAGCACACAACATTGACCTGAAGGGGACAGTCG
TGATCTTTGACGAAGCTCACAACGTGGAGAAGATGTGTGAAGAATCGGCATCCTTTGACCTGACTCCCCA
TGACCTGGCTTCAGGACTGGACGTCATAGACCAGGTGCTGGAGGAGCAGACCAAGGCAGCGCAGCAGGGT
GAGCCCCACCCGGAGTTCAGCGCGGACTCCCCCAGCCCAGGGCTGAACATGGAGCTGGAAGACATTGCAA
AGCTGAAGATGATCCTGCTGCGCCTGGAGGGGGCCATCGATGCTGTTGAGCTGCCTGGAGACGACAGCGG
TGTCACCAAGCCAGGGAGCTACATCTTTGAGCTGTTTGCTGAAGCCCAGATCACGTTTCAGACCAAGGGC
TGCATCCTGGACTCGCTGGACCAGATCATCCAGCACCTGGCAGGACGTGCTGGAGTGTTCACCAACACGG
CCGGACTGCAGAAGCTGGCGGACATTATCCAGATTGTGTTCAGTGTGGACCCCTCCGAGGGCAGCCCTGG
TTCCCCAGCAGGGCTGGGGGCCTTACAGTCCTATAAGGTGCACATCCATCCTGATGCTGGTCACCGGAGG
ACGGCTCAGCGGTCTGATGCCTGGAGCACCACTGCAGCCAGAAAGCGAGGGAAGGTGCTGAGCTACTGGT
GCTTCAGTCCCGGCCACAGCATGCACGAGCTGGTCCGCCAGGGCGTCCGCTCCCTCATCCTTACCAGCGG
CACGCTGGCCCCGGTGTCCTCCTTTGCTCTGGAGATGCAGATCCCTTTCCCAGTCTGCCTGGAGAACCCA
CACATCATCGACAAGCACCAGATCTGGGTGGGGGTCGTCCCCAGAGGCCCCGATGGAGCCCAGTTGAGCT
CCGCGTTTGACAGACGGTTTTCCGAGGAGTGCTTATCCTCCCTGGGGAAGGCTCTGGGCAACATCGCCCG
CGTGGTGCCCTATGGGCTCCTGATCTTCTTCCCTTCCTATCCTGTCATGGAGAAGAGCCTGGAGTTCTGG
CGGGCCCGCGACTTGGCCAGGAAGATGGAGGCGCTGAAGCCGCTGTTTGTGGAGCCCAGGAGCAAAGGCA
GCTTCTCCGAGACCATCAGTGCTTACTATGCAAGGGTTGCCGCCCCTGGGTCCACCGGCGCCACCTTCCT
GGCGGTCTGCCGGGGCAAGGCCAGCGAGGGGCTGGACTTCTCAGACACGAATGGCCGTGGTGTGATTGTC
ACGGGCCTCCCGTACCCCCCACGCATGGACCCCCGGGTTGTCCTCAAGATGCAGTTCCTGGATGAGATGA
AGGGCCAGGGTGGGGCTGGGGGCCAGTTCCTCTCTGGGCAGGAGTGGTACCGGCAGCAGGCGTCCAGGGC
TGTGAACCAGGCCATCGGGCGAGTGATCCGGCACCGCCAGGACTACGGAGCTGTCTTCCTCTGTGACCAC
AGGTTCGCCTTTGCCGACGCAAGAGCCCAACTGCCCTCCTGGGTGCGTCCCCACGTCAGGGTGTATGACA
ACTTTGGCCATGTCATCCGAGACGTGGCCCAGTTCTTCCGTGTTGCCGAGCGAACTATGCCAGCGCCGGC
CCCCCGGGCTACAGCACCCAGTGTGCGTGGAGAAGATGCTGTCAGCGAGGCCAAGTCGCCTGGCCCCTTC
TTCTCCACCAGGAAAGCTAAGAGTCTGGACCTGCATGTCCCCAGCCTGAAGCAGAGGTCCTCAGGGTCAC
CAGCTGCCGGGGACCCCGAGAGTAGCCTGTGTGTGGAGTATGAGCAGGAGCCAGTTCCTGCCCGGCAGAG
GCCCAGGGGGCTGCTGGCCGCCCTGGAGCACAGCGAACAGCGGGCGGGGAGCCCTGGCGAGGAGCAGGCC
CACAGCTGCTCCACCCTGTCCCTCCTGTCTGAGAAGAGGCCGGCAGAAGAACCGCGAGGAGGGAGGAAGA
AGATCCGGCTGGTCAGCCACCCGGAGGAGCCCGTGGCTGGTGCACAGACGGACAGGGCCAAGCTCTTCAT
GGTGGCCGTGAAGCAGGAGTTGAGCCAAGCCAACTTTGCCACCTTCACCCAGGCCCTGCAGGACTACAAG
GGTTCCGATGACTTCGCCGCCCTGGCCGCCTGTCTCGGCCCCCTCTTTGCTGAGGACCCCAAGAAGCACA
ACCTGCTCCAAGGCTTCTACCAGTTTGTGCGGCCCCACCATAAGCAGCAGTTTGAGGAGGTCTGTATCCA
GCTGACAGGACGAGGCTGTGGCTATCGGCCTGAGCACAGCATTCCCCGAAGGCAGCGGGCACAGCCGGTC
CTGGACCCCACTGGAAGAACGGCGCCGGATCCCAAGCTGACCGTGTCCACGGCTGCAGCCCAGCAGCTGG
ACCCCCAAGAGCACCTGAACCAGGGCAGGCCCCACCTGTCGCCCAGGCCACCCCCAACAGGAGACCCTGG
CAGCCAACCACAGTGGGGGTCTGGAGTGCCCAGAGCAGGGAAGCAGGGCCAGCACGCCGTGAGCGCCTAC
CTGGCTGATGCCCGCAGGGCCCTGGGGTCCGCGGGCTGTAGCCAACTCTTGGCAGCGCTGACAGCCTATA
AGCAAGACGACGACCTCGACAAGGTGCTGGCTGTGTTGGCCGCCCTGACCACTGCAAAGCCAGAGGACTT
CCCCCTGCTGCACAGGTTCAGCATGTTTGTGCGTCCACACCACAAGCAGCGCTTCTCACAGACGTGCACA
GACCTGACCGGCCGGCCCTACCCGGGCATGGAGCCACCGGGACCCCAGGAGGAGAGGCTTGCCGTGCCTC
CTGTGCTTACCCACAGGGCTCCCCAACCAGGCCCCTCACGGTCCGAGAAGACCGGGAAGACCCAGAGCAA
GATCTCGTCCTTCCTTAGACAGAGGCCAGCAGGGACTGTGGGGGCGGGCGGTGAGGATGCAGGTCCCAGC
CAGTCCTCAGGACCTCCCCACGGGCCTGCAGCATCTGAGTGGGGCCTCTAG

Translation (996 aa):
MPYNYLLDAKSRRAHNIDLKGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAAQQG
EPHPEFSADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQITFQTKG
CILDSLDQIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAGLGALQSYKVHIHPDAGHRR
TAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENP
HIIDKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFPSYPVMEKSLEFW
RARDLARKMEALKPLFVEPRSKGSFSETISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIV
TGLPYPPRMDPRVVLKMQFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDH
RFAFADARAQLPSWVRPHVRVYDNFGHVIRDVAQFFRVAERTMPAPAPRATAPSVRGEDAVSEAKSPGPF
FSTRKAKSLDLHVPSLKQRSSGSPAAGDPESSLCVEYEQEPVPARQRPRGLLAALEHSEQRAGSPGEEQA
HSCSTLSLLSEKRPAEEPRGGRKKIRLVSHPEEPVAGAQTDRAKLFMVAVKQELSQANFATFTQALQDYK
GSDDFAALAACLGPLFAEDPKKHNLLQGFYQFVRPHHKQQFEEVCIQLTGRGCGYRPEHSIPRRQRAQPV
LDPTGRTAPDPKLTVSTAAAQQLDPQEHLNQGRPHLSPRPPPTGDPGSQPQWGSGVPRAGKQGQHAVSAY
LADARRALGSAGCSQLLAALTAYKQDDDLDKVLAVLAALTTAKPEDFPLLHRFSMFVRPHHKQRFSQTCT
DLTGRPYPGMEPPGPQEERLAVPPVLTHRAPQPGPSRSEKTGKTQSKISSFLRQRPAGTVGAGGEDAGPS
QSSGPPHGPAASEWGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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