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Report for CCDS71536.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71536.1 Public Mus musculus 4 Ube2j2 23 108 98 CCDS HistoryNCBI Gene:140499Re-query CCDS DB by CCDS ID:71536.1Re-query CCDS DB by GeneID:140499See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71536.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000118192.7 ENSMUSP00000112785.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000118192.7Link to Ensembl Protein Viewer:ENSMUSP00000112785.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000118192Re-query CCDS DB by Protein ID:ENSMUSP00000112785
Original member Current member NCBI NM_001284314.1 NP_001271243.1 Accepted alive Link to Nucleotide Sequence:NM_001284314.1Link to Protein Sequence:NP_001271243.1Re-query CCDS DB by Nucleotide ID:NM_001284314Re-query CCDS DB by Protein ID:NP_001271243Link to BLAST:NP_001271243.1

Chromosomal Locations for CCDS 71536.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 155949007 155949137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155951472 155951512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155955234 155955336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155955422 155955560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155957081 155957365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (699 nt):
ATGAGCAATAACAGCAATAAGAGAGCTCCAACAACAGCAACACAAAGGTTGAAGCAGGACTACCTTCGAA
TT
AAGAAAGACCCAGTGCCTTACATCTGTGCAGAGCCCCTCCCTTCAAATATTCTTGAATGGCATTATGT
T
GTCCGAGGCCCTGAGATGACTCCTTATGAAGGTGGCTATTATCATGGAAAACTAATTTTTCCCAGAGAA
TTT
CCATTTAAGCCTCCTAGTATTTACATGATAACCCCCAATGGAAGATTTAAGTGCAACACAAGGCTGT
GT
CTCTCCATCACAGATTTCCACCCAGATACATGGAATCCAGCGTGGTCCGTCTCCACCATTCTAACAGG
G
CTCCTGAGCTTTATGGTGGAGAAAGGCCCCACCCTGGGGAGCATAGAGACGTCGGACTTCACGGAAATT
AAA
CAGAAACAGAAAGCACAAGATGAACTAAGTAACAGGCCCCAGAATCTTCCTTTGCCAGACGTGGTTC
CT
GATGGGGAGCTGCACCGTGGCCAGCATGGGATCCAGCTCCTCAATGGGCACGCACCCGCTGCTGGCCC
C
AACCTCGCTGGGCTCCCACAGGCCAACAGGCATCACGGACTCCTGGGCGGCGCGTTGGCGAACTTGTTT
GTT
ATAGTTGGGTTTGCAGCCTTCGCCTACACGGTCAAGTACGTGCTGAGAAGCATAGCACAGGAGTGA


Translation (232 aa):
MSNNSNKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPRE
F
PFKPPSIYMITPNGRFKCNT
RLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSDFTEI
K
QKQKAQDELSNRPQNLPLPDVVPDGELHRGQHGIQLLNGHAPAAGPNLAGLPQANRHHGLLGGALANLF
V
IVGFAAFAYTVKYVLRSIAQE




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser