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Report for CCDS61931.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61931.1 Public Homo sapiens 16 CNEP1R1 24 110 108 CCDS HistoryNCBI Gene:255919Re-query CCDS DB by CCDS ID:61931.1Re-query CCDS DB by GeneID:255919See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61931.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000427478.7 ENSP00000394224.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000427478.7Link to Ensembl Protein Viewer:ENSP00000394224.2Re-query CCDS DB by Nucleotide ID:ENST00000427478Re-query CCDS DB by Protein ID:ENSP00000394224
Original member Current member EBI ENST00000565457.5 ENSP00000456686.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000565457.5Link to Ensembl Protein Viewer:ENSP00000456686.1Re-query CCDS DB by Nucleotide ID:ENST00000565457Re-query CCDS DB by Protein ID:ENSP00000456686
Original member Current member NCBI NM_001281789.2 NP_001268718.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001281789.2Link to Protein Sequence:NP_001268718.1Re-query CCDS DB by Nucleotide ID:NM_001281789Re-query CCDS DB by Protein ID:NP_001268718Link to BLAST:NP_001268718.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001268718.1 125 Q8N9A8-1 125 100% 0 0

Chromosomal Locations for CCDS 61931.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 50025316 50025340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50026396 50026467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50029725 50029798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50033397 50033506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50034102 50034156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 50035417 50035458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (378 nt):
ATGAACTCGCTGGAGCAGGCGGAAGATCTCAAGGCTTTTGAGAGGAGACTTACTGAATATATTCATTGTT
TGCAACCTGCTACTGGACGCTGGAGAATGCTTCTTATAGTGGTATCTGTCTGTACAGCTACTGGTGCCTG
GAACTGGTTAATAGACCCTGAGACACAAAAGGTGTCCTTCTTCACATCATTATGGAATCACCCATTTTTC
ACCATTAGCTGTATCACTCTAATAGGCTTGTTCTTTGCTGGAATACACAAGAGAGTAGTTGCACCATCAA
TTATAGCTGCTCGATGTCGAACGGTATTAGCAGAATACAATATGTCTTGTGATGATACAGGAAAACTAAT
TTTGAAACCTAGGCCTCATGTTCAATGA

Translation (125 aa):
MNSLEQAEDLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSFFTSLWNHPFF
TISCITLIGLFFAGIHKRVVAPSIIAARCRTVLAEYNMSCDDTGKLILKPRPHVQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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