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Report for CCDS51979.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51979.1 Public Mus musculus 7 Zfp628 23 108 98 CCDS HistoryNCBI Gene:232816Re-query CCDS DB by CCDS ID:51979.1Re-query CCDS DB by GeneID:232816See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51979.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000116354.3 ENSMUSP00000112058.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000116354.3Link to Ensembl Protein Viewer:ENSMUSP00000112058.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000116354Re-query CCDS DB by Protein ID:ENSMUSP00000112058
Original member NCBI NM_170759.2 NP_739565.2 Updated not alive Link to Nucleotide Sequence:NM_170759.2Link to Protein Sequence:NP_739565.2Re-query CCDS DB by Nucleotide ID:NM_170759Re-query CCDS DB by Protein ID:NP_739565
Current member NCBI NM_170759.3 NP_739565.2 Accepted alive Link to Nucleotide Sequence:NM_170759.3Link to Protein Sequence:NP_739565.2Re-query CCDS DB by Nucleotide ID:NM_170759Re-query CCDS DB by Protein ID:NP_739565Link to BLAST:NP_739565.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_739565.2 1038 Q8CJ78-1 1038 100% 0 0

Chromosomal Locations for CCDS 51979.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 4918781 4921897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3117 nt):
ATGGCCGGCTCCCACGTGGACATGGCGCCAGCTTCCACCACCGAGGGAACTGGGGAAAAGCCAGGGCCCA
CT
GCGCCAGCACCCACCCCAGCTGCTCAGTATGAGTGTGGGGAATGCGGCAAGTCCTTCAGGTGGTCATC
T
CGGCTCCTGCACCATCAGCGCACTCACACAGGTGAACGGCCCTATAAATGCCCGGACTGCCCCAAAGCC
TTC
AAGGGTTCCTCAGCCCTCCTCTACCACCAGCGGGGCCATACAGGCGAGCGGCCCTATCAGTGCCCAG
AC
TGCCCCAAAGCCTTCAAGCGCTCTTCCTTGCTGCAGATCCACCGCAGTGTGCACACAGGCCTGCGGGC
C
TTCACCTGCGGCCAGTGTGGTCTGGCCTTCAAGTGGTCATCCCATTACCAATACCACTTGAGACAGCAT
ACC
GGTGAGCGGCCCTACCCGTGCCCTGACTGCCCCAAGGCCTTCAAGAACTCCTCCAGCTTGCGGCGCC
AC
CGGCATGTGCACACAGGAGAACGCCCTTACACCTGTGGCATTTGTGGGAAGAGCTTTACTCAGAGCAC
C
AATCTGCGGCAGCACCAGCGGGTGCACACGGGCGAGCGCCCCTTCCGTTGCCCACTCTGCCCCAAGACC
TTC
ACACACTCCTCCAACCTGCTGCTGCACCACCGCACCCACGGCCCTGCCCCCGGCCCCGCCCCTGCCC
CC
GCCCCCCCAGGGGAGACCAGCAGAGCTGACACCAAGGTTCTGGTCTCTGATGCCTACTTGCAGCCCCG
T
AGCCCGCCTGAGCCTCCAGCCCCACCACCCCAGCCCCCACCCGTGGTGCCCGAGCTTTTTTTGGCTGCT
GCT
GAGACTACAGTGGAGCTAGTGTACCGCTGCGATGGCTGCGAGCAGGGCTTCAGCAGCGAGGAGCTCC
TC
CTGGAGCACCAGCCATGCCCGGGGCCCCCTGTAGCCACCCAGTCCCAGGATGTGCCTGCCGAGCTGCC
C
CAGGCTGACTCCGCCCTACCACAGCCCCCACCTGCCACTCCAGGCCCTCCTAACTTTGCTTGTCTTCCT
TGT
GGGAAGTCCTTCCGGACGGTGGCTGGCCTGTCCCGTCACCAGCACAGCCATGGTGCGGCCAGTGGAC
AG
GCCTTTCGCTGTGGCAGCTGTGATGGTGCCTTCCCACAACTGGCCAGCCTCTTGGCTCACCAGCAGTG
T
CACGTGGAGGAGGCGGCAGCCGGACGCCCACCTCCCCAGGCTGAGGTTGCGGAGGTCACCTGTCCCCAG
GAA
CCTGTAGCCCCAGCCACTCCTGCCCCACCCCCTCCTCCTCCACCTGCCCCGGTGGTTTCTGCAGAGC
GG
CCCTACAAATGTGCCGAGTGTGGGAAGGCCTTCAAGGGTTCTTCCGGGCTGCGCTACCACCTTCGGGA
C
CACACAGGTGAGCGGCCCTACCAGTGTGGGGAGTGCGGCAAAGCCTTCAAACGCTCCTCCCTGCTGGCC
ATC
CACCAGCGTGTGCACACAGGCCTGCGAGCCTTCACCTGCGGCCAGTGTGGCCTCACCTTCAAGTGGT
CG
TCCCACTATCAGTACCATCTGCGACTTCACTCGGGTGAGCGGCCCTATGCCTGCACTGAGTGTGGCAA
A
GCCTTCCGTAACACTTCGTGCCTGCGGCGCCACCGGCATGTGCACACCGGTGAGCGGCCCCACTCATGT
AGT
GTGTGTGGCAAGAGCTTCGCACAGACGTCCAACTTGCGGCAGCACCAGCGGGTGCACACGGGCGAGC
GC
CCCTTCCGTTGCCCGCTCTGCCCCAAGACCTTCACACACTCCTCCAACCTGCTGCTGCACCAGCGCAC
T
CATTCTGCCGAGCGCCCTTTTGCCTGCCCCATTTGTGGCCGTGGCTTTGTTATGGCTGCCTACCTGCAG
CGG
CATCTGAGGACGCACACCCCAGCCACCACAACTTCGGGCACCACCGGCTCTGCTGTAGCATCGCAGC
CC
CCTGCCCCATTGGCTGCAGCTCCAACTCCACTGGCTGCTCAAGATGTTCACGTACTCCCTAACCTACA
G
GCCACACTTTCACTTGAAGTAGCTGGGGGAACAGCCCAGCCTACGCCCCCAGGCCCGGCTGCTCCCAGT
TCT
CAAACATTTCTCCTGGTACAGACTGCCCAGGGCCTCCAGCTGATTCCAAGCAGTGTCCAATCCCCTA
CT
CCTCCACCCCCGCCTCCACCCCCTAAAGTCATTCTGCTGCCTCCTGCCAGTGCTGGAGGTCCGGGCAG
T
GGTGCTGCAAGGCCAGGCCCTCGGTCTGTTGGGAAAGCTGGACAGGGGACAGGGGTGGTGTGGTTTCCA
GGC
CCAGGTGGTCTGGGGCTGCAAGGAGGGGCCAATGCAGGGGCTAGCGGGGGAGGGCAGAGCCTCATTG
TT
CTGCAGAATGTAGGGAGTGGGGAGACAGGACCACAGGAAGTGAGTGGGGTCCAGCTTCAGCCAGCACA
G
GAAGTGGCCACGGTACAACTACAGCCTGCACAGGAAGTGACTACAGTCCAGCTACAACCAGCACAGGAG
GTG
ACTACGGTCCAGCTCCAGCCCCTGACAGGCCAAGTCTCCAATTCTAATGGAGGAGCTGGCACTACAG
AA
GCTCCAAACCTGCTGCTGGTTCAGAGTGGGGCAACTGAAGAGTTGCTGACCGGCCCTGGGCCCGGGGA
A
GTGGGAGACAGTGAGGCCGGTGCTGGTGTGGTCCAGGACGTCCTGTTTGAGACACTGCAGACAGATGAG
GGG
CTGCAGAGTGTGCTGGTGCTGAGTGGGGCGGATGGTGAGCAGACTAGGCTCTGCGTGCAGGAGGTGG
AA
ACGCTTTCCCCCGGTCTGGCGGAGCCAGCGGCCACTGGCCCATCAGGACAGAAACTCCTTATCATTCG
T
AGCGCCCCAGCTACTGATCTGCTAGAAAATAGCAGCGTTGCAGGAGGCACCACAACACTGCAACTCCTG
GCC
CCGTCAGCACCTGGCCCGGTCTCTGCCCCTGTGGGGGTGCCCGTAGCTCCCCCGTCCCAGATGGTAC
AA
GTGGTCCCCGCAGTGGCTGGACCAGGGGTCATGGCTCCCCAGAACTTGCCCTCCATCCAGATTGTGCA
G
ACTCTTCCTGCAGTCCAACTGGTACACACGTTTTGA


Translation (1038 aa):
MAGSHVDMAPASTTEGTGEKPGPTAPAPTPAAQYECGECGKSFRWSSRLLHHQRTHTGERPYKCPDCPKA
F
KGSSALLYHQRGHTGERPYQCPDCPKAFKRSSLLQIHRSVHTGLRAFTCGQCGLAFKWSSHYQYHLRQH
T
GERPYPCPDCPKAFKNSSSLRRHRHVHTGERPYTCGICGKSFTQSTNLRQHQRVHTGERPFRCPLCPKT
F
THSSNLLLHHRTHGPAPGPAPAPAPPGETSRADTKVLVSDAYLQPRSPPEPPAPPPQPPPVVPELFLAA
A
ETTVELVYRCDGCEQGFSSEELLLEHQPCPGPPVATQSQDVPAELPQADSALPQPPPATPGPPNFACLP
C
GKSFRTVAGLSRHQHSHGAASGQAFRCGSCDGAFPQLASLLAHQQCHVEEAAAGRPPPQAEVAEVTCPQ
E
PVAPATPAPPPPPPPAPVVSAERPYKCAECGKAFKGSSGLRYHLRDHTGERPYQCGECGKAFKRSSLLA
I
HQRVHTGLRAFTCGQCGLTFKWSSHYQYHLRLHSGERPYACTECGKAFRNTSCLRRHRHVHTGERPHSC
S
VCGKSFAQTSNLRQHQRVHTGERPFRCPLCPKTFTHSSNLLLHQRTHSAERPFACPICGRGFVMAAYLQ
R
HLRTHTPATTTSGTTGSAVASQPPAPLAAAPTPLAAQDVHVLPNLQATLSLEVAGGTAQPTPPGPAAPS
S
QTFLLVQTAQGLQLIPSSVQSPTPPPPPPPPKVILLPPASAGGPGSGAARPGPRSVGKAGQGTGVVWFP
G
PGGLGLQGGANAGASGGGQSLIVLQNVGSGETGPQEVSGVQLQPAQEVATVQLQPAQEVTTVQLQPAQE
V
TTVQLQPLTGQVSNSNGGAGTTEAPNLLLVQSGATEELLTGPGPGEVGDSEAGAGVVQDVLFETLQTDE
G
LQSVLVLSGADGEQTRLCVQEVETLSPGLAEPAATGPSGQKLLIIRSAPATDLLENSSVAGGTTTLQLL
A
PSAPGPVSAPVGVPVAPPSQMVQVVPAVAGPGVMAPQNLPSIQIVQTLPAVQLVHTF




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