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Report for CCDS47916.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47916.1 Public Homo sapiens 8 TBC1D31 24 110 108 CCDS HistoryNCBI Gene:93594Re-query CCDS DB by CCDS ID:47916.1Re-query CCDS DB by GeneID:93594See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47916.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327098.9 ENSP00000312701.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000327098.9Link to Ensembl Protein Viewer:ENSP00000312701.5Re-query CCDS DB by Nucleotide ID:ENST00000327098Re-query CCDS DB by Protein ID:ENSP00000312701
Original member Current member NCBI NM_001145088.2 NP_001138560.1 Accepted alive Link to Nucleotide Sequence:NM_001145088.2Link to Protein Sequence:NP_001138560.1Re-query CCDS DB by Nucleotide ID:NM_001145088Re-query CCDS DB by Protein ID:NP_001138560Link to BLAST:NP_001138560.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138560.1 970 Q96DN5-3 970 100% 0 0

Chromosomal Locations for CCDS 47916.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 123072770 123072846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123077111 123077257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123082702 123082817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123084162 123084340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123093591 123093742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123097282 123097441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123100807 123101007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123105288 123105464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123109317 123109396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123109474 123109620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123120055 123120188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123126056 123126189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123126508 123126687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123128281 123128513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123129066 123129218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123130198 123130333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123140761 123140901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123144717 123144855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123150036 123150128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123151806 123151939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2913 nt):
ATGCAGAGCACTGACCTAGGCAACAAGGAGAGCGGCAAGATATGGCACCGCAAGCCGTCCCCGGCCACGC
GGGACGGAATTATAGTGAACATTATTCACAACACTTCCGATTACCATCCAAAAGTTTTGCGATTTTTGAA
TGTGGCTTTTGATGGCACAGGCGACTGCTTAATTGCTGGGGACCACCAAGGAAATATTTATGTTTTTGAC
TTACATGGAAACAGGTTCAATCTTGTTCAGCGAACAGCACAAGCTTGCACAGCTCTGGCCTTTAATCTTC
GTAGGAAATCTGAATTCCTTGTGGCATTAGCTGATTATTCTATTAAATGTTTTGATACAGTCACCAAGGA
GCTAGTTAGCTGGATGAGAGGACATGAATCATCAGTATTTTCGATCTCTGTGCATGCATCAGGGAAATAT
GCCATCACAACTTCTTCTGATACAGCACAATTATGGGACTTGGATACCTTTCAGAGAAAAAGAAAGCTGA
ATATTCGCCAGTCTGTGGGTATACAGAAGGTTTTCTTTCTACCATTAAGTAATACCATCCTCAGCTGTTT
TAAAGATAATTCCATTTTTGCCTGGGAATGTGACACACTTTTTTGCAAATATCAATTGCCAGCTCCACCT
GAAAGCTCTAGTATATTATACAAAGTGTTTGCTGTAACCAGAGATGGCCGAATCCTGGCTGCTGGAGGCA
AGTCAAATCATCTTCATTTGTGGTGCTTGGAAGCTAGGCAGCTCTTTAGAATTATCCAGATGCCCACTAA
AGTTCGAGCCATTCGCCATCTGGAATTTCTTCCTGATAGTTTTGATGCTGGTTCTAATCAGGTTCTTGGA
GTACTAAGTCAAGATGGTATTATGAGATTTATCAATATGCAGACTTGTAAACTTCTCTTTGAGATTGGGA
GCCTCGATGAAGGAATTAGCTCATCAGCAATTAGCCCACATGGACGGTACATTGCATCTATTATGGAAAA
TGGAAGTCTAAACATATATTCAGTTCAGGCTTTAACACAAGAAATAAATAAGCCACCTCCGCCTTTAGTG
AAAGTTATTGAAGATTTGCCCAAGAATAAACTGAGTTCCAGTGATCTTAAGATGAAAGTAACATCAGGGA
GAGTACAGCAGCCAGCAAAATCTAGGGAAAGCAAAATGCAAACTAGAATATTAAAACAAGACCTGACTGG
TGATTTTGAAAGTAAAAAGAATGAATTACCAGATGGATTAAACAAAAAGCGTTTACAAATCTTATTAAAA
GGCTATGGTGAATATCCAACAAAATACAGAATGTTCATTTGGCGCTCTCTGCTACAACTGCCTGAAAATC
ATACTGCGTTTAGTACCCTCATAGATAAGGGGACTCATGTGGCATTTCTCAACCTTCAGAAGAAATACCC
CATCAAAAGTAGGAAGCTACTCAGAGTATTACAGAGAACCTTATCTGCATTAGCTCACTGGTCTGTCATT
TTTAGTGACACACCATATCTTCCACTCTTGGCATTTCCATTTGTAAAATTATTCCAGAACAACCAACTCA
TCTGTTTTGAAGTTATTGCTACTCTCATAATCAATTGGTGTCAACACTGGTTTGAATATTTTCCTAATCC
TCCTATCAATATTCTTAGCATGATAGAAAATGTTTTGGCATTTCATGACAAGGAACTGCTGCAACACTTC
ATAGATCATGATATAACCTCCCAGCTATATGCATGGCCTCTTCTTGAAACTGTGTTCTCAGAAGTGCTGA
CAAGAGAGGAGTGGCTGAAATTGTTCGATAATATCTTTTCCAACCATCCTTCCTTCCTTCTGATGACTGT
TGTAGCCTACAACATATGTTCTAGAACGCCTCTGCTCAGCTGTAATCTTAAAGATGACTTTGAGTTTTTT
TTTCACCATCGGAATAACCTGGATATAAATGTTGTGATTAGACAAGTTTATCATCTCATGGAGACCACGC
CTACTGACATTCATCCAGACAGCATGCTTAATGTTTTTGTTGCACTGACAAAAGGGCAGTATCCAGTATT
TAATCAATATCCAAAGTTTATTGTGGACTATCAAACACAGGAACGAGAAAGAATAAGGAATGATGAATTG
GATTACTTAAGAGAGAGGCAGACAGTTGAAGATATGCAAGCTAAAGTCGACCAGCAAAGAGTTGAAGATG
AAGCTTGGTACCAGAAACAGGAGCTGCTTCGTAAAGCTGAAGAAACAAGAAGAGAAATGCTCTTACAAGA
GGAGGAGAAAATGATACAACAAAGACAGAGGCTAGCTGCTGTGAAAAGAGAGCTGAAAGTAAAGGAAATG
CACTTACAAGATGCTGCAAGAAGGCGTTTTCTGAAGCTTCAGCAAGATCAACAGGAAATGGAACTAAGAA
GACTGGATGATGAAATTGGGAGAAAGAATCTTACTGAAAATCAAGAAGCTCTTGCAAAAGAAATGCGAGC
AGATGCAGATGCCTATAGACGAAAAGTGGATCTTGAAGAACACATGTTTCATAAGCTGATAGAAGCAGGT
GAAACCCAGAGCCAGAAAACTCAGAAGTGGAAGGAAGCTGAAGGAAAAGAGTTCCGTTTGAGATCAGCAA
AGAAAGCTTCTGCTCTTTCAGATGCGTCTAGAAAGTGGTTTTTAAAGCAAGAGATAAATGCGGCTGTAGA
ACATGCTGAAAATCCATGTCATAAAGAAGAACCCAGGTTCCAAAATGAACAGGACTCAAGCTGTTTGCCT
AGAACCTCACAATTAAATGACTCTTCTGAAATGGATCCCTCAACACAGATTTCTTTAAATAGAAGAGCAG
TAGAATGGGACACCACGGGACAGAATCTTATTAAGAAAGTGAGAAATCTTCGCCAGAGACTCACTGCCCG
GGCTCGTCACAGATGTCAAACCCCTCATCTTTTGGCTGCATAG

Translation (970 aa):
MQSTDLGNKESGKIWHRKPSPATRDGIIVNIIHNTSDYHPKVLRFLNVAFDGTGDCLIAGDHQGNIYVFD
LHGNRFNLVQRTAQACTALAFNLRRKSEFLVALADYSIKCFDTVTKELVSWMRGHESSVFSISVHASGKY
AITTSSDTAQLWDLDTFQRKRKLNIRQSVGIQKVFFLPLSNTILSCFKDNSIFAWECDTLFCKYQLPAPP
ESSSILYKVFAVTRDGRILAAGGKSNHLHLWCLEARQLFRIIQMPTKVRAIRHLEFLPDSFDAGSNQVLG
VLSQDGIMRFINMQTCKLLFEIGSLDEGISSSAISPHGRYIASIMENGSLNIYSVQALTQEINKPPPPLV
KVIEDLPKNKLSSSDLKMKVTSGRVQQPAKSRESKMQTRILKQDLTGDFESKKNELPDGLNKKRLQILLK
GYGEYPTKYRMFIWRSLLQLPENHTAFSTLIDKGTHVAFLNLQKKYPIKSRKLLRVLQRTLSALAHWSVI
FSDTPYLPLLAFPFVKLFQNNQLICFEVIATLIINWCQHWFEYFPNPPINILSMIENVLAFHDKELLQHF
IDHDITSQLYAWPLLETVFSEVLTREEWLKLFDNIFSNHPSFLLMTVVAYNICSRTPLLSCNLKDDFEFF
FHHRNNLDINVVIRQVYHLMETTPTDIHPDSMLNVFVALTKGQYPVFNQYPKFIVDYQTQERERIRNDEL
DYLRERQTVEDMQAKVDQQRVEDEAWYQKQELLRKAEETRREMLLQEEEKMIQQRQRLAAVKRELKVKEM
HLQDAARRRFLKLQQDQQEMELRRLDDEIGRKNLTENQEALAKEMRADADAYRRKVDLEEHMFHKLIEAG
ETQSQKTQKWKEAEGKEFRLRSAKKASALSDASRKWFLKQEINAAVEHAENPCHKEEPRFQNEQDSSCLP
RTSQLNDSSEMDPSTQISLNRRAVEWDTTGQNLIKKVRNLRQRLTARARHRCQTPHLLAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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