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Report for CCDS45144.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45144.1 Public Homo sapiens 14 ADCK1 24 110 108 CCDS HistoryNCBI Gene:57143Re-query CCDS DB by CCDS ID:45144.1Re-query CCDS DB by GeneID:57143See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45144.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341211.5 ENSP00000339663.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000341211.5Link to Ensembl Protein Viewer:ENSP00000339663.5Re-query CCDS DB by Nucleotide ID:ENST00000341211Re-query CCDS DB by Protein ID:ENSP00000339663
Original member Current member NCBI NM_001142545.2 NP_001136017.1 Accepted alive Link to Nucleotide Sequence:NM_001142545.2Link to Protein Sequence:NP_001136017.1Re-query CCDS DB by Nucleotide ID:NM_001142545Re-query CCDS DB by Protein ID:NP_001136017Link to BLAST:NP_001136017.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001136017.1 455 Q86TW2-3 455 100% 0 0

Chromosomal Locations for CCDS 45144.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 77818979 77819113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77822435 77822518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77887091 77887249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77899100 77899258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77907803 77907919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77924457 77924606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77925764 77925961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77931518 77931711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77933220 77933391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1368 nt):
ATGGCCAGAAAGGCTCTCAAGCTTGCTTCGTGGACCAGCATGGCTCTTGCTGCCTCTGGCATCTACTTCT
ACAGTAACAAGTACTTGGACCCTAATGACTTTGGCGCTGTCAGGGTGGGCAGAGCAGTTGCTACGACGGC
TGTCATCAGTTACGACTACCTCACTTCCCTGAAGAGTGTCCCTTATGGCTCAGAGGAGTACTTGCAGCTG
AGATCTAAGATCCATGATTTGTTCCAGAGCTTCGATGACACCCCTCTGGGGACGGCCTCCCTGGCCCAGG
TCCACAAGGCAGTGCTGCATGATGGGCGGACGGTGGCCGTGAAGGTCCAGCACCCAAAGGTGCGGGCTCA
GAGCTCGAAGGACATTCTCCTGATGGAGGTGCTCGTTCTGGCTGTGAAGCAGCTGTTCCCAGAGTTTGAG
TTTATGTGGCTTGTGGATGAAGCCAAGAAGAACCTGCCTTTGGAGCTGGATTTCCTCAATGAAGGGAGGA
ATGCTGAGAAGGTGTCCCAGATGCTCAGGCATTTTGACTTCTTGAAGGTCCCCCGAATCCACTGGGACCT
GTCCACGGAGCGGGTCCTCCTGATGGAGTTTGTGGATGGCGGGCAGGTCAATGACAGAGACTACATGGAG
AGGAACAAGATCGACGTCAATGAGATCTCACGCCACCTGGGCAAGATGTATAGTGAGATGATCTTCGTCA
ATGGCTTCGTGCACTGCGATCCCCACCCCGGCAATGTACTGGTGCGGAAGCACCCCGGCACGGGAAAGGC
GGAGATTGTCCTGTTGGACCATGGGCTTTACCAGATGCTCACGGAAGAATTCCGCCTGAATTACTGCCAC
CTCTGGCAGTCTCTGATCTGGACTGACATGAAGAGAGTGAAGGAGTACAGCCAGCGACTGGGAGCCGGGG
ATCTCTACCCCTTGTTTGCCTGCATGCTGACGGCGCGATCGTGGGACTCGGTCAACAGAGGCATCAGCCA
AGCTCCCGTCACTGCCACTGAGGACTTAGAGATTCGCAACAACGCGGCCAACTACCTCCCCCAGATCAGC
CATCTCCTCAACCACGTGCCGCGCCAGATGCTGCTCATCTTGAAGACCAACGACCTGCTGCGTGGCATTG
AGGCCGCCCTGGGCACCCGCGCCAGCGCCAGCTCCTTTCTCAACATGTCACGTTGCTGCATCAGAGCGCT
AGCTGAGCACAAGAAGAAGAATACCTGTTCATTCTTCAGAAGGACCCAGATCTCTTTCAGCGAGGCCTTC
AACTTATGGCAGATCAACCTCCATGAGCTCATCCTGCGTGTGAAGGGGTTGAAGCTGGCTGACCGGGTCT
TGGCCCTAATATGCTGGCTGTTCCCTGCTCCACTCTGA

Translation (455 aa):
MARKALKLASWTSMALAASGIYFYSNKYLDPNDFGAVRVGRAVATTAVISYDYLTSLKSVPYGSEEYLQL
RSKIHDLFQSFDDTPLGTASLAQVHKAVLHDGRTVAVKVQHPKVRAQSSKDILLMEVLVLAVKQLFPEFE
FMWLVDEAKKNLPLELDFLNEGRNAEKVSQMLRHFDFLKVPRIHWDLSTERVLLMEFVDGGQVNDRDYME
RNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGNVLVRKHPGTGKAEIVLLDHGLYQMLTEEFRLNYCH
LWQSLIWTDMKRVKEYSQRLGAGDLYPLFACMLTARSWDSVNRGISQAPVTATEDLEIRNNAANYLPQIS
HLLNHVPRQMLLILKTNDLLRGIEAALGTRASASSFLNMSRCCIRALAEHKKKNTCSFFRRTQISFSEAF
NLWQINLHELILRVKGLKLADRVLALICWLFPAPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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