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Report for CCDS44228.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44228.1 Public Homo sapiens 1 DENND4B 24 110 108 CCDS HistoryNCBI Gene:9909Re-query CCDS DB by CCDS ID:44228.1Re-query CCDS DB by GeneID:9909See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44228.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361217.9 ENSP00000354597.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361217.9Link to Ensembl Protein Viewer:ENSP00000354597.4Re-query CCDS DB by Nucleotide ID:ENST00000361217Re-query CCDS DB by Protein ID:ENSP00000354597
Original member Current member NCBI NM_014856.3 NP_055671.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014856.3Link to Protein Sequence:NP_055671.2Re-query CCDS DB by Nucleotide ID:NM_014856Re-query CCDS DB by Protein ID:NP_055671Link to BLAST:NP_055671.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055671.2 1496 O75064 1496 100% 0 0

Chromosomal Locations for CCDS 44228.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 153930297 153930442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153930539 153930603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153930692 153930857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153930947 153931064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153932204 153932440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153932642 153932777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153932861 153933030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153933197 153933319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153933483 153933871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153934135 153934302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153934760 153934964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153936060 153936188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153936542 153936748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153937488 153937614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153937724 153937863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153938900 153939045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153939589 153939804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153940156 153940256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153940431 153940606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153940904 153941048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153941231 153941289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153941374 153941440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153941869 153942113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153942187 153942356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153942556 153942625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153942878 153943130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 153944058 153944374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4491 nt):
ATGGCGGAGGAGCGGCCCCCCCGGCTGGTGGATTACTTCGTGGTAGCTGGGCTTGCAGGGAACGGAGCAC
CCATCCCTGAGGAAACGTGGGTTCCTGAACCCAGTGGGCCCCTGCGCCCTCCCCGGCCAGCTGAGCCCAT
CACAGATGTGGCAGTCATCGCTAGGGCACTGGGCGAGGAAGTGCCCCAGGGCTACACATGCATCCAGGCT
TCTGCTGGGGGCCACCCCTTGGAACTCAGTGCTGGACTTCTGGGTGGAACTCAACCCGTCATCTGCTACC
GCAGGGGCCGTGACAAGCCCCCCCTCGTTGAGCTGGGGGTGTTGTATGAGGGGAAGGAACGTCCCAAGCC
TGGCTTCCAAGTGCTTGACACGACACCCTACAGCCACTCAGCAAACCTGGCCCCTCCAGGCCCCGGGCAC
CCCCGCACCTACCTCACTTACCGGCGGGCAGCAGAGGGGGCAGGGCTGCATGCCCTGGGCATCACTGACC
TCTGCCTGGTGCTGCCCAGTAAGGGCGAGGGCACTCCTCATACTTACTGCCGGCTGCCCCGCAACCTCAA
CCCTGGCATGTGGGGCCCAGCAGTGTACCTGTGCTATAAGGTGGGCCTGGCGAAGGCCAACACGCTGGTG
TACGAGGCAGAGCTGCTGGGCCGCTACCCGGAGGAGGACAATGAGGCGTTCCCGCTGCCCGAGTCAGTGC
CCGTCTTCTGCCTGCCCATGGGGGCCACTATCGAGTGCTGGCCTGCCCAGACCAAGTACCCCGTGCCCGT
CTTCTCCACCTTTGTGCTCACGGGTGCAGCTGGTGATAAGGTGTATGGTGCCGCCCTGCAGTTCTACGAG
GCGTTCCCAAGGGCCAGGCTATCAGAGCGACAGGCACGGGCACTGGGCCTGCTGAGCGCCGTGGAGCGGG
GTCGGGCACTGGGGGGCAGAGCTGTGCGCAGCCGGCGTGCCATCGCTGTGCTGTCCCGCTGGCCTGCCTT
CCCTGCCTTCCGCGCCTTCCTCACCTTCCTTTACCGCTACTCCGTCTCAGGCCCCCACCGCCTACCCTTG
GAAGCGCACATCTCCCACTTCATTCACAACGTTCCCTTCCCTTCCCCACAGAGACCCCGCATCCTAGTGC
AGATGTCTCCCTATGACAACTTGCTCCTCTGTCAGCCTGTATCCTCACCCCTGCCCCTCAGTGGTGCCAG
CTTCCTGCAGCTGCTGCAGAGCCTGGGCCCTGAGCTGGCTATCACACTGCTGCTGGCTGTGCTCACAGAG
CACAAGCTGCTAGTCCACTCGCTGCGGCCAGACCTGCTCACCAGCGTCTGTGAGGCCCTCGTCTCGATGA
TCTTCCCACTGCACTGGCAGTGCCCCTACATTCCTCTGTGCCCGCTGGTGCTGGCAGATGTGCTGAGTGC
CCCAGTGCCCTTCATTGTGGGTATCCACTCCAGCTACTTTGATCTGCATGACCCGCCTGCTGATGTCATC
TGTGTAGACCTTGATACCAACACGCTCTTCCAGACTGAGGAAAAGAAGCTCCTCTCCCCTCGGACCCTGC
CCCGCAGACCCTACAAGGTTCTGCTGGCCACACTGACAAACCTGTACCAGCAGCTGGACCAGACATACAC
TGGACCTGAGGAGGAAGCATCCCTGGAGTTCCTACTGACAGACTACGAGGCAGTGTGTGGCCGCAGGGCC
CGGCTGGAGCGCGAAGTCCAAGGAGCCTTCCTCCGCTTCATGGCCTGTCTGCTCAAGGGCTACCGGGTCT
TCCTGCGCCCACTCACCCAGGCCCCCTCCGAGGGAGCTCGTGATGTTGACAACCTTTTCTTCCTGCAGGG
CTTCCTCAAATCCCGGGAACGCTCCAGCCACAAACTTTACTCTCAGCTGCTGCACACACAGATGTTCTCA
CAGTTCATTGAGGAGTGCTCTTTTGGCTCTGCTCGCCATGCTGCCCTTGAATTCTTTGACTCTTGTGTTG
AAAAGGTCCACCCAGAGCAGGAGAAGCCTGAGCCGACACCCTTAGTGGAGCTAGAGGAGCTGTCAGGAAG
TGAGCTCACTGTCTTTATCACACCTCCCGAGGAGCCTGCCTTACCAGAGGGCAGTGAATCCACTCCCCAG
TACTGCTATGATGGATTCCCAGAGCTACGGGCTGAGTTGTTTGAGTCTCTTCAAGAGCAACCTGGGGCCC
TGCCTGTGCCAGGCCCTTCCCGTAGCGCCCCCAGCAGTCCTGCTCCTCGCCGTACCAAACAGGAGATGAA
AGTTGCACAGCGGATGGCACAGAAGTCAGCAGCTGTGCCTGAGCTGTGGGCCCGGTGCCTGCTGGGGCAC
TGCTATGGGCTGTGGTTCCTGTGTCTGCCTGCCTATGTGCGGTCGGCACCCTCCCGAGTGCAGGCACTGC
ACACAGCCTACCATGTGCTGCGCCAGATGGAGAGCGGCAAGGTGGTGCTCCCTGATGAGGTGTGTTACCG
GGTACTGATGCAGCTCTGCTCACACTATGGGCAGCCTGTGCTGTCTGTGCGGGTCATGCTGGAGATGCGT
CAGGCAGGCATTGTGCCCAACACCATCACCTATGGCTACTACAATAAGGCTGTGTTGGAAAGCAAGTGGC
CGTCTGGCACACCAGGTGGGCGTCTGCGCTGGGCCAAGCTCCGGAATGTTGTCCTGGGGGCTGCTCAGTT
CCGCCAGCCCTTGAGAGAACGGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAG
GAGCAGGTGTCAGCACATCAAGAGGCAGGCAGCTCCCAGGCAGAGCCCTATTTGGAGCGCCCTTCCCCTA
CTCGCCCTCTTCAGCGCCAGACTACTTGGGCTGGGCGAAGTCTGAGAGACCCAGCCTCACCCCCTGGACG
CCTGGTGAAGAGTGGTAGCCTGGGCAGTGCCCGAGGGGCACAGCCCACTGTGGAGGCCGGTGTGGCCCAC
ATGATAGAGGCCTTGGGGGTCCTGGAACCCCGGGGATCACCTGTGCCCTGGCACGATGGAAGTCTCTCAG
ACCTGAGCCTGACAGGGGAGGAGCCGCTCCCTGGAGGCAGCCCAGGGGGCTCAGGCTCAGCCCTGAGTGC
CCAGTCCACTGAGGCCCTGGAAGGGCTAAGTGGGCGGGGACCCAAGGCTGGTGGGCGACAGGATGAGGCA
GGCACCCCCCGACGAGGGCTGGGTGCCCGCCTCCAACAGCTGCTCACTCCTTCCCGCCACTCCCCTGCCT
CCCGCATTCCCCCACCTGAGCTGCCTCCTGACCTGCCACCCCCAGCCCGCCGCAGCCCCATGGACAGTCT
TCTGCACCCCCGGGAGCGCCCTGGATCCACTGCCTCCGAGAGCTCAGCCTCTCTGGGCAGTGAGTGGGAC
CTCTCAGAATCTTCTCTCAGCAACCTGAGTCTTCGCCGTTCCTCAGAGCGCCTCAGTGACACCCCTGGAT
CCTTCCAGTCACCTTCCCTGGAAATTCTGCTGTCCAGCTGCTCCCTGTGCCGTGCCTGTGATTCGCTGGT
GTATGATGAGGAAATCATGGCTGGCTGGGCACCTGATGACTCTAACCTCAACACAACCTGCCCCTTCTGC
GCCTGCCCCTTTGTGCCCCTGCTCAGTGTCCAGACCCTTGATTCCCGGCCCAGTGTCCCCAGCCCCAAAT
CTGCTGGTGCCAGTGGCAGCAAAGATGCTCCTGTCCCTGGTGGTCCTGGCCCTGTGCTCAGTGACCGAAG
GCTCTGCCTTGCTCTGGATGAGCCCCAGCTCTGCAACGGGCACATGGGGGGAGCCTCCCGGCGGGTTGAG
AGTGGGGCATGGGCATACCTGAGCCCCCTGGTGCTGCGTAAGGAGCTGGAGTCGCTGGTAGAGAACGAGG
GCAGTGAGGTGCTGGCGTTGCCTGAACTGCCCTCTGCCCACCCCATCATCTTCTGGAACCTTTTGTGGTA
TTTCCAACGGCTACGCCTGCCCAGTATTCTACCAGGCCTGGTGCTGGCCTCCTGTGATGGGCCTTCGCAC
TCCCAGGCCCCATCTCCTTGGCTAACCCCTGATCCAGCCTCTGTTCAGGTACGGCTGCTGTGGGATGTAC
TGACCCCTGACCCCAATAGCTGCCCACCTCTCTATGTGCTCTGGAGGGTCCACAGCCAGATCCCCCAGCG
GGTGGTATGGCCAGGCCCTGTACCTGCATCCCTTAGTTTGGCACTGTTGGAGTCAGTGCTGCGCCATGTT
GGACTCAATGAAGTGCACAAGGCTGTGGGGCTCCTGCTGGAAACTCTAGGGCCCCCACCCACTGGCCTGC
ACCTGCAGAGGGGAATCTACCGTGAGATATTATTCCTGACAATGGCTGCTCTGGGCAAGGACCACGTGGA
CATAGTGGCCTTCGATAAGAAGTACAAGTCTGCCTTTAACAAGCTGGCCAGCAGCATGGGCAAGGAGGAG
CTGAGGCACCGGCGGGCGCAGATGCCCACTCCCAAGGCCATTGACTGCCGAAAATGTTTTGGAGCACCTC
CAGAATGCTAG

Translation (1496 aa):
MAEERPPRLVDYFVVAGLAGNGAPIPEETWVPEPSGPLRPPRPAEPITDVAVIARALGEEVPQGYTCIQA
SAGGHPLELSAGLLGGTQPVICYRRGRDKPPLVELGVLYEGKERPKPGFQVLDTTPYSHSANLAPPGPGH
PRTYLTYRRAAEGAGLHALGITDLCLVLPSKGEGTPHTYCRLPRNLNPGMWGPAVYLCYKVGLAKANTLV
YEAELLGRYPEEDNEAFPLPESVPVFCLPMGATIECWPAQTKYPVPVFSTFVLTGAAGDKVYGAALQFYE
AFPRARLSERQARALGLLSAVERGRALGGRAVRSRRAIAVLSRWPAFPAFRAFLTFLYRYSVSGPHRLPL
EAHISHFIHNVPFPSPQRPRILVQMSPYDNLLLCQPVSSPLPLSGASFLQLLQSLGPELAITLLLAVLTE
HKLLVHSLRPDLLTSVCEALVSMIFPLHWQCPYIPLCPLVLADVLSAPVPFIVGIHSSYFDLHDPPADVI
CVDLDTNTLFQTEEKKLLSPRTLPRRPYKVLLATLTNLYQQLDQTYTGPEEEASLEFLLTDYEAVCGRRA
RLEREVQGAFLRFMACLLKGYRVFLRPLTQAPSEGARDVDNLFFLQGFLKSRERSSHKLYSQLLHTQMFS
QFIEECSFGSARHAALEFFDSCVEKVHPEQEKPEPTPLVELEELSGSELTVFITPPEEPALPEGSESTPQ
YCYDGFPELRAELFESLQEQPGALPVPGPSRSAPSSPAPRRTKQEMKVAQRMAQKSAAVPELWARCLLGH
CYGLWFLCLPAYVRSAPSRVQALHTAYHVLRQMESGKVVLPDEVCYRVLMQLCSHYGQPVLSVRVMLEMR
QAGIVPNTITYGYYNKAVLESKWPSGTPGGRLRWAKLRNVVLGAAQFRQPLRERQQQQQQQQQQQQQQQQ
EQVSAHQEAGSSQAEPYLERPSPTRPLQRQTTWAGRSLRDPASPPGRLVKSGSLGSARGAQPTVEAGVAH
MIEALGVLEPRGSPVPWHDGSLSDLSLTGEEPLPGGSPGGSGSALSAQSTEALEGLSGRGPKAGGRQDEA
GTPRRGLGARLQQLLTPSRHSPASRIPPPELPPDLPPPARRSPMDSLLHPRERPGSTASESSASLGSEWD
LSESSLSNLSLRRSSERLSDTPGSFQSPSLEILLSSCSLCRACDSLVYDEEIMAGWAPDDSNLNTTCPFC
ACPFVPLLSVQTLDSRPSVPSPKSAGASGSKDAPVPGGPGPVLSDRRLCLALDEPQLCNGHMGGASRRVE
SGAWAYLSPLVLRKELESLVENEGSEVLALPELPSAHPIIFWNLLWYFQRLRLPSILPGLVLASCDGPSH
SQAPSPWLTPDPASVQVRLLWDVLTPDPNSCPPLYVLWRVHSQIPQRVVWPGPVPASLSLALLESVLRHV
GLNEVHKAVGLLLETLGPPPTGLHLQRGIYREILFLTMAALGKDHVDIVAFDKKYKSAFNKLASSMGKEE
LRHRRAQMPTPKAIDCRKCFGAPPEC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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