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Report for CCDS4347.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4347.1 Public Homo sapiens 5 ADRA1B 24 110 108 CCDS HistoryNCBI Gene:147Re-query CCDS DB by CCDS ID:4347.1Re-query CCDS DB by GeneID:147See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4347.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000306675.5 ENSP00000306662.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000306675.5Link to Ensembl Protein Viewer:ENSP00000306662.3Re-query CCDS DB by Nucleotide ID:ENST00000306675Re-query CCDS DB by Protein ID:ENSP00000306662
Original member Current member NCBI NM_000679.4 NP_000670.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000679.4Link to Protein Sequence:NP_000670.1Re-query CCDS DB by Nucleotide ID:NM_000679Re-query CCDS DB by Protein ID:NP_000670Link to BLAST:NP_000670.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000670.1 520 P35368 520 100% 0 0

Chromosomal Locations for CCDS 4347.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 159916906 159917854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 159971879 159972492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1563 nt):
ATGAATCCCGACCTGGACACCGGCCACAACACATCAGCACCTGCCCACTGGGGAGAGTTGAAAAATGCCA
ACTTCACTGGCCCCAACCAGACCTCGAGCAACTCCACACTGCCCCAGCTGGACATCACCAGGGCCATCTC
TGTGGGCCTGGTGCTGGGCGCCTTCATCCTCTTTGCCATCGTGGGCAACATCCTAGTCATCTTGTCTGTG
GCCTGCAACCGGCACCTGCGGACGCCCACCAACTACTTCATTGTCAACCTGGCCATGGCCGACCTGCTGT
TGAGCTTCACCGTCCTGCCCTTCTCAGCGGCCCTAGAGGTGCTCGGCTACTGGGTGCTGGGGCGGATCTT
CTGTGACATCTGGGCAGCCGTGGATGTCCTGTGCTGCACAGCGTCCATTCTGAGCCTGTGCGCCATCTCC
ATCGATCGCTACATCGGGGTGCGCTACTCTCTGCAGTATCCCACGCTGGTCACCCGGAGGAAGGCCATCT
TGGCGCTGCTCAGTGTCTGGGTCTTGTCCACCGTCATCTCCATCGGGCCTCTCCTTGGGTGGAAGGAGCC
GGCACCCAACGATGACAAGGAGTGCGGGGTCACCGAAGAACCCTTCTATGCCCTCTTCTCCTCTCTGGGC
TCCTTCTACATCCCTCTGGCGGTCATTCTAGTCATGTACTGCCGTGTCTATATAGTGGCCAAGAGAACCA
CCAAGAACCTAGAGGCAGGAGTCATGAAGGAGATGTCCAACTCCAAGGAGCTGACCCTGAGGATCCATTC
CAAGAACTTTCACGAGGACACCCTTAGCAGTACCAAGGCCAAGGGCCACAACCCCAGGAGTTCCATAGCT
GTCAAACTTTTTAAGTTCTCCAGGGAAAAGAAAGCAGCTAAGACGTTGGGCATTGTGGTCGGTATGTTCA
TCTTGTGCTGGCTACCCTTCTTCATCGCTCTACCGCTTGGCTCCTTGTTCTCCACCCTGAAGCCCCCCGA
CGCCGTGTTCAAGGTGGTGTTCTGGCTGGGCTACTTCAACAGCTGCCTCAACCCCATCATCTACCCATGC
TCCAGCAAGGAGTTCAAGCGCGCTTTCGTGCGCATCCTCGGGTGCCAGTGCCGCGGCCGCGGCCGCCGCC
GACGCCGCCGCCGCCGTCGCCTGGGCGGCTGCGCCTACACCTACCGGCCGTGGACGCGCGGCGGCTCGCT
GGAGCGCTCGCAGTCGCGCAAGGACTCGCTGGACGACAGCGGCAGCTGCCTGAGCGGCAGCCAGCGGACC
CTGCCCTCGGCCTCGCCGAGCCCGGGCTACCTGGGCCGCGGCGCGCCACCGCCAGTCGAGCTGTGCGCCT
TCCCCGAGTGGAAGGCGCCCGGCGCCCTCCTGAGCCTGCCCGCGCCTGAGCCCCCCGGCCGCCGCGGCCG
CCACGACTCGGGCCCGCTCTTCACCTTCAAGCTCCTGACCGAGCCCGAGAGCCCCGGGACCGACGGCGGC
GCCAGCAACGGAGGCTGCGAGGCCGCGGCCGACGTGGCCAACGGGCAGCCGGGCTTCAAAAGCAACATGC
CCCTGGCGCCCGGGCAGTTTTAG

Translation (520 aa):
MNPDLDTGHNTSAPAHWGELKNANFTGPNQTSSNSTLPQLDITRAISVGLVLGAFILFAIVGNILVILSV
ACNRHLRTPTNYFIVNLAMADLLLSFTVLPFSAALEVLGYWVLGRIFCDIWAAVDVLCCTASILSLCAIS
IDRYIGVRYSLQYPTLVTRRKAILALLSVWVLSTVISIGPLLGWKEPAPNDDKECGVTEEPFYALFSSLG
SFYIPLAVILVMYCRVYIVAKRTTKNLEAGVMKEMSNSKELTLRIHSKNFHEDTLSSTKAKGHNPRSSIA
VKLFKFSREKKAAKTLGIVVGMFILCWLPFFIALPLGSLFSTLKPPDAVFKVVFWLGYFNSCLNPIIYPC
SSKEFKRAFVRILGCQCRGRGRRRRRRRRRLGGCAYTYRPWTRGGSLERSQSRKDSLDDSGSCLSGSQRT
LPSASPSPGYLGRGAPPPVELCAFPEWKAPGALLSLPAPEPPGRRGRHDSGPLFTFKLLTEPESPGTDGG
ASNGGCEAAADVANGQPGFKSNMPLAPGQF


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 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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