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Report for CCDS41495.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41495.1 Public Homo sapiens 10 MSRB2 24 110 108 CCDS HistoryNCBI Gene:22921Re-query CCDS DB by CCDS ID:41495.1Re-query CCDS DB by GeneID:22921See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41495.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376510.8 ENSP00000365693.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376510.8Link to Ensembl Protein Viewer:ENSP00000365693.3Re-query CCDS DB by Nucleotide ID:ENST00000376510Re-query CCDS DB by Protein ID:ENSP00000365693
Original member Current member NCBI NM_012228.4 NP_036360.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012228.4Link to Protein Sequence:NP_036360.3Re-query CCDS DB by Nucleotide ID:NM_012228Re-query CCDS DB by Protein ID:NP_036360Link to BLAST:NP_036360.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036360.3 182 Q9Y3D2 182 100% 0 0

Chromosomal Locations for CCDS 41495.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 23095609 23095726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23104144 23104244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23110242 23110318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23119304 23119451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23120758 23120862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (549 nt):
ATGGCGCGGCTCCTCTGGTTGCTCCGGGGCCTGACCCTCGGAACTGCGCCTCGGCGGGCGGTGCGGGGCC
AAGCGGGCGGCGGCGGGCCCGGCACCGGGCCGGGACTGGGGGAGGCAGGGTCTCTTGCAACGTGTGAGCT
GCCTCTTGCCAAGAGTGAGTGGCAAAAGAAACTAACCCCGGAGCAGTTCTACGTCACAAGAGAAAAGGGA
ACGGAACCGCCTTTCAGTGGGATCTACCTGAATAACAAGGAAGCAGGAATGTATCATTGCGTGTGCTGCG
ACAGTCCACTCTTCAGTTCTGAGAAAAAGTACTGCTCTGGCACTGGGTGGCCTTCGTTTTCCGAGGCTCA
TGGTACGTCTGGCTCTGATGAAAGCCACACAGGGATCCTGAGACGTCTGGATACCTCGTTAGGATCAGCT
CGCACAGAGGTTGTCTGCAAGCAGTGTGAAGCTCATCTAGGTCACGTGTTTCCTGATGGACCTGGGCCCA
ATGGTCAGAGGTTTTGCATCAACAGTGTGGCTTTGAAGTTCAAACCAAGGAAACACTGA

Translation (182 aa):
MARLLWLLRGLTLGTAPRRAVRGQAGGGGPGTGPGLGEAGSLATCELPLAKSEWQKKLTPEQFYVTREKG
TEPPFSGIYLNNKEAGMYHCVCCDSPLFSSEKKYCSGTGWPSFSEAHGTSGSDESHTGILRRLDTSLGSA
RTEVVCKQCEAHLGHVFPDGPGPNGQRFCINSVALKFKPRKH


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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