CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS39536.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
39536.1 |
Public |
Mus musculus |
6 |
Dysf |
23 |
108 |
98 |
|
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 39536.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000081904.6 |
ENSMUSP00000080579.6 |
Accepted |
alive |
|
|
|
NCBI |
NM_021469.3 |
NP_067444.2 |
Updated |
not alive |
|
|
|
NCBI |
NM_021469.4 |
NP_067444.2 |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_067444.2 |
2100 |
Q9ESD7-2 |
2100 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 39536.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (6303 nt): ATGCTCTGTTGCTTGCTGGCAAGGGCCAGCAACCTCCCCAATGTGAAGAAGGACCGGCGCAGCGATCCAG TTGCCAGCCTGATTTTTCGAGGGGTAAAGAAGAGAACCAAAGTCATCAAGAACAGTGTGAACCCCGTGTG GAATGAGGGCTTTGAGTGGGACCTCAAAGGTATTCCTCTAGATCAGAGCTCAGAACTTCTCGTGGTGGTC AAGGACCATGAGACGATGGGAAGAAACAGGTTCCTGGGGGAAGCCAAGATCCCACTCCAGGAGGTCCTTG CCACCCCCAGCCTCTCTGCCAGCTTCAACGCACCTCTGCTAGACGCCAAGCAGCAACCCACGGGGGCCTC TCTGGTCCTGCAGGTGTCCTACACGCCACCCCCAGGAGCTGTGCCCCTGTTCCCACCACCTGCTTCTCTA GCACCCTCCCCGACACTGCCTGACATGGATCTGGTGCCTGGTGGGGGACAGAGCCGGGCTGAGACTTGGT CCCTGCTCAGTGACAGCACCATGGACACGAGATACTCTGGGAAGAAGTGGCCGGTCCCCACGGACACAGG AGGGGAGGAAGACACCGAGGACCAGGGCCTGACTGGAGATGAAGCTGAGCCGTTCCTGGACCAGAGTGCT GCTGTGGGCCCAGGGGGACCGACCACACCCAGGAAGCCACCTTCCCACCCTCCTCCCCACTATCCAGGGG CAAAAAGAAAAAGAAGCTCTGCCCCACCTAGAAAGCTGCTGTCAGACAAGCCACAGGACTTCCAGATCAG AGTCCAGGTGATAGAGGGGCGTCAGCTGCCTGGGGTGAATATTAAGCCTGTGGTCAAGGTCACAGCTGCT GGGCAGACCAAGCGAACTCGGATCCAGAAGGGAAATAGCCCACTCTTCAATGAGACTCTTTTCTTCAACG TATTTGACTCTCCCTTGGAGCTGTTTGATGAGCCCATCTTCATCACGGTGGTGGACTCACGCTCCCTTAG GACAGATGCCCTCCTTGGCGAGTTCCGGATGGATGTGGGCACCGTGTACAGAGAGCCCCGACACGCTTAT CTCCGGAAGTGGCTGCTGCTCTCCGACCCTGATGACTTCTCTGCGGGGGCCAGAGGCTACCTCAAAGCCA GCCTGTGTGTGCTAGGGCCTGGAGATGAAGCTCCCCTGGACAAGAAGGACCCTTCTGAAGACAAAGAGGA CATTGAAGGCAACCTGCTTAGGCCCACCGGTGTGGCCCTTCGAGGAGCCCACTTCTGCCTGAAGCTCTTC CGGGCTGAGGACTTACCACAGATGGACGATGCTGTGATGGACAACGTCAAGCAGATCTTTGGCTTTGACA GCAACAAGAAGAACTTGGTGGATCCCTTTGTGGAAGTCAGCTTTGCTGGGAAAATGCTCTGCAGCAAGAT CCTGGAGAAGACAGCTAACCCTCAGTGGAACCAGAACATCACCTTGCCTGCGATGTTTCCCTCTATGTGT GAAAAAATGAGGATTCGTGTCATGGACTGGGACCGCCTCACTCACAATGACACTGTGGCCACCACCTACT TGGGTATGTCGAAAATCTCTGCTACTGGAGGAGAAATAGAAGTGGACGACAACCTGGGCTTCCTCCCCAC TTTTGGGCCCTGCTATGTGAACCTCTATGGCAGTCCCCGAGAGTTCACGGGCTTCCCAGATCCTTATGCA GAGCTCAACACAGGAAAGGGAGAAGGTGTGGCTTATCGAGGCAGGGTTCTGTTGTCCCTGGAGACCAAAC TGGTGGAACACAGTGAGCAGAAGGTGGAAGACCTTCCTGCTGATGATATCCTGCGTGTGGAGAAGTACCT GCGGAGGCGCAAATATTCCCTCTTTGCTGCCTTCTACTCAGCCACAATGCTGCAGGATGTGGATGACGCC ATCCAGTTCGAGGTCAGCATTGGGAACTACGGGAACAAGTTCGACACCACCTGCCTGCCCTTGGCCTCCA CCACCCAGTACAGCCGGGCGGTCTTTGATGGATGCCACTACTATTACTTGCCTTGGGGCAACGTGAAGCC CGTGGTGGTGCTGTCCTCATACTGGGAAGACATCAGCCATCGAATTGAGATCCAAAACCAGCTCCTCAGG GTCGCTGACCGCCTGGAAGCTAACCTGGAGCAGGTCCACTTGGCTCTGAAGGCACAGTGTTCCTCCGAGG ATGTGGACGCCCTGGTGGCTCAGTTGACAGATGAGCTCCTTGCAGACTGCAGCCAGCCCCTGTGTGACAT CCACGAGATACCTTCTGCCACCCACCTTGATCAGTACCTGCTCCGGCTACGCACCCGTCACCTGAGCCAG ATCAAAGAAGCTGCTCTGGCCTTGAAGCTTGGCCATAGTGAGCTCTCCACTGCCCTGGAGCAGGCCGAGG ACTGGCTTCTGCATCTCCGTGCCCTGGCCGAGGAGCCCCAGAACAGCCTGCCGGACATCATCATCTGGAT GCTGCAGGGTGACAAGCGTGTGGCCTACCAGCGGGTGCCTGCCCATGAAGTCCTCTTCTCCCGGCGGGGC CCCAGCTACTGCGGCAGGAACTGTGGGAAGCTGCAGACCATCTTTCTGAAATATCCTATGGAAGGTATGC CTGGGGCCCGAATGCCCGTGCAGATTCGGATCAAGCTCTGGTTCGGGCTCTCTGTGGATGAGAAGGAATT CAATCAGTTTGCTGAGGGAAAGCTCTCTGTCTTTGCCGAAACGTATGAGAACCAGACAAAGCTGGCACTG GTCGGGAACTGGGGCACAACGGGCCTCACCTACCCCAAGTTTTCTGATGTCACAGGCAAGATCAAACTAC CAAAGGATAGCTTCCGCCCCTCAGCTGGCTGGGCCTGGGCAGGAGATTGGTTCGTGTGTCCAGAGAAGAC CCTACTCCATGATGCTGACGCTGGTCATCTGAGCTTCGTGGAGGAGGTGTTCGAGAACCAGACCCGGCTC CCTGGGGGCCAGTGGATTTACATGAGTGATAACTACACAGATGTGAATGGGGAGAAGGTACTTCCGAAGG ATGATATTGAATGCCCGCTGGGCTGGAAGTGGGAAGATGAAGAATGGTCCACAGACCTCAATCGGGCTGT TGATGAACAAGGCTGGGAGTACAGCATCACCATACCCCCAGACCGAAAGCCAAAACACTGGGTCCCTGTT GAGAAGATGTATTACACTCACAGGCGTCGACGCTGGGTCCGACTGCGCAGGAGGGACCTCAGCCAGATGG AAGCACTGAAGAGGCACAGGCAGGCAGAGGCCGAGGGCGAGGGCTGGGAGTATGCCTCTCTCTTCGGCTG GAAGTTCCACCTGGAGTACCGCAAGACAGATGCCTTCCGCCGCCGCCGCTGGCGCCGCCGCATGGAGCCG CTGGAGAAGACGGGACCTGCAGCTGTGTTTGCCCTCGAGGGGGCCCTGGGCGGCATGGTGGATGACAAGA GCGAAGACTCCATGTCTGTTTCTACCCTGAGCTTTGGCGTTAACAGACCCACAATCTCCTGCATCTTTGA CTATGGGAACCGCTACCATCTGCGCTGCTACCTGTACCAGGCCCGAGACCTGCCAGCCATGGACAAGGAC TCCTTCTCTGATCCCTACGCCATCGTCTCCTTCCTGCATCAAAGCCAGAAGACAGTGGTGGAGAAGAACA CCCTGAATCCCACCTGGGATCAAACCCTCATCTTCTATGAGATTGAGATCTTCGGCGAGCCAGCCAGTAT CGCCGAGCATCCGCCCTGCATCGTGGTGGAGCTCTATGACCACGACACCTATGGTGCTGACGAGTTCATG GGTCGCTGTATTTGTCAGCCAAGCCTGGAACGGATGCCCCGCCTGGCCTGGTTCCCACTGACCCGGGGCA GCCAGCCTGCCGGCGAGCTGCTGGCAGCGTTCGAGCTTATCCAGAGAGAGAAGCCAGCCATCCATCACAT CCCTGGCTTTGAGATGCATGAAACTTCAAGGATTTTGGATGAGACGGAGGACACAGATTTGCCTTACCCA CCACCTCAAAGGGAGGCCAACATCTACATGGTTCCCCAGAACATTAAGCCAGCTCTCCAACGTACTGCCA TTGAGATCCTGGCCTGGGGCCTGCGGAACATGAAGAGCTATCAGATGGCCAGCATCTCTTCCCCCAGCCT CGTGGTGGAGTGTGGTGGGCAGACAGTGCAGTCCTGTGTCATCAGAAACCTTCGGAAGAACCCCAACTTT GATGTCTGTACTCTCTTCATGGAAGTGATGTTACCCAGAGAGGACCTCTACTGTCCACCTATTGTGGTCA AGGTCATTGATAATCGCCAGTTTGGCCGCCGGCCAGTTGTGGGTCAGTGTACCATTCGCTCCCTGGAGAA CTTCCTGTGCGACCCATACTCAGCAGAGAGTCCATCCCCACAGGGTGGCCCAGATGATGTGAGCTTACTC AGCCCCGGGGAAGATGTGCTGATTGACATCGATGACAAGGAGCCTCTCATTCCTGTCCAGGAGGAGGAGT TCATTGACTGGTGGAGCAAATTCTTTGCTTCTGTCGGGGAGAGGGAAAAGTGTGGTTCCTACCTGGAGAA GGATTTTGACACCTTGAAGGTCTATGACACACAGCTGGAGAATGTGGAGGCTTTTGGAGGCCTGTCCGAC TTTTGTAACACCTTCAAGCTCTACCGGGGCAGGACTCAGGAGGAGACAGATGATCCATCTGTCATCGGAG AATTTAAGGGTCTCTTCAAAATTTATCCCCTCCCAGAAGATCCAGCCATCCCCATGCCCCCGAGACAATT CCATCAGCTGGCTGCTCAGGGTCCCCAGGAATGCTTGGTCCGTATTTATATCGTCCGAGCATTTGGCTTA CAGCCCAAGGACCCCAATGGCAAGTGTGACCCTTACATCAAGATCTCCATAGGGAAGAAATCAGTGAGTG ACCAGGATAACTACATCCCTTGCACCCTGGAGCCTGTATTCGGAAAGATGTTTGAACTCACCTGCACTCT ACCTCTGGAGAAGGACCTGAAGATCACACTCTACGATTATGACCTGCTCTCCAAGGATGAGAAGATTGGG GAGACGGTCATAGACCTGGAGAACAGGCTGCTGTCCAAGTTTGGGGCTCGCTGTGGGCTCCCACAGACCT ACTGTGTCTCTGGACCAAATCAGTGGAGAGATCAGCTCCGCCCCTCCCAGCTCCTCCACCTCTTCTGCCA GCAGCACAGGATCAAGGCCCCCGTGTACCGGACAGACCGAGTGACGTTTCAGGATAAGGACTACACCATT GAGGAGATAGAGGCTGGCAGACTCCCAAACCCACACCTGGGCCCAGTGGAGGAACGCTTAGCCCTGCATG TCCTTCAGCAACAAGGCTTGGTTCCTGAGCATGTGGAGTCACGGCCTCTTTATAGTCCTCTGCAGCCAGA TATCGAGCAGGGGAAGCTACAGATGTGGATTGACATATTTCCAAAGGTGCTGGGCCGGCCTGGACCTCCC TTCAACATCACCCCACGGAAAGCTAGAAGGTTTTTTCTGCGTTGTATTATTTGGAACACAAAAGATGTGA TCTTGGATGACCTCAGTCTCACGGGGGAGAAGATGAGTGACATCTATGTGAAAGGCTGGATGGTGGGATT CGAAGAACACAAGCAGAAGACAGATGTGCACTACCGCTCCCTGGGTGGGGAGGGCAATTTCAACTGGAGG TTCGTGTTTCCCTTCGACTATCTGCCTGCTGAGCAAGTCTGTGCTGTTGCCAAGAAGGATGCCTTCTGGA GACTCGACAAGACAGAGAGCAAGATCCCAGCACGTGTGGTCTTCCAGATCTGGGACAATGACAAATTCTC TTTTGATGACTTTCTGGGCTCTCTGCAGCTGGATCTCAACCGAATGCCCAAGCCAGCCAAGACGGCTGAG AAGTGCTCCTTGGACCAGCTGGATGACACCTTCCACCCAGAATGGTTTGTGTCCCTTTTTGAGCAGAAGA CAGTGAAAGGATGGTGGCCTTGTGTGACAGAGGAGGGCGAGAAGAAGATGTTGGCGGGCAAGCTGGAAAT GACCTTGGAGATTGTTGCAGAAAGTGAACATGAAGAGCGGCCTGCTGGCCAAGGTCGGGATGAACCCAAC ATGAATCCGAAGCTAGAGGATCCAAGGCGCCCCGATACTTCTTTCCTGTGGTTCACCTCCCCGTACAAGA CCATGAAGTTCATCTTGTGGCGACGCTTCCGGTGTGCCATCATCCTCTTCATCATCCTCTTCATCCTCCT GCTCTTCCTGGGTGTCTTTGTCTACGCCTTCCCGAACTACGCTGCCATGAAGCTGGTGAAGCCCTTTCGA TGA
Translation (2100 aa): MLCCLLARASNLPNVKKDRRSDPVASLIFRGVKKRTKVIKNSVNPVWNEGFEWDLKGIPLDQSSELLVVV KDHETMGRNRFLGEAKIPLQEVLATPSLSASFNAPLLDAKQQPTGASLVLQVSYTPPPGAVPLFPPPASL APSPTLPDMDLVPGGGQSRAETWSLLSDSTMDTRYSGKKWPVPTDTGGEEDTEDQGLTGDEAEPFLDQSA AVGPGGPTTPRKPPSHPPPHYPGAKRKRSSAPPRKLLSDKPQDFQIRVQVIEGRQLPGVNIKPVVKVTAA GQTKRTRIQKGNSPLFNETLFFNVFDSPLELFDEPIFITVVDSRSLRTDALLGEFRMDVGTVYREPRHAY LRKWLLLSDPDDFSAGARGYLKASLCVLGPGDEAPLDKKDPSEDKEDIEGNLLRPTGVALRGAHFCLKLF RAEDLPQMDDAVMDNVKQIFGFDSNKKNLVDPFVEVSFAGKMLCSKILEKTANPQWNQNITLPAMFPSMC EKMRIRVMDWDRLTHNDTVATTYLGMSKISATGGEIEVDDNLGFLPTFGPCYVNLYGSPREFTGFPDPYA ELNTGKGEGVAYRGRVLLSLETKLVEHSEQKVEDLPADDILRVEKYLRRRKYSLFAAFYSATMLQDVDDA IQFEVSIGNYGNKFDTTCLPLASTTQYSRAVFDGCHYYYLPWGNVKPVVVLSSYWEDISHRIEIQNQLLR VADRLEANLEQVHLALKAQCSSEDVDALVAQLTDELLADCSQPLCDIHEIPSATHLDQYLLRLRTRHLSQ IKEAALALKLGHSELSTALEQAEDWLLHLRALAEEPQNSLPDIIIWMLQGDKRVAYQRVPAHEVLFSRRG PSYCGRNCGKLQTIFLKYPMEGMPGARMPVQIRIKLWFGLSVDEKEFNQFAEGKLSVFAETYENQTKLAL VGNWGTTGLTYPKFSDVTGKIKLPKDSFRPSAGWAWAGDWFVCPEKTLLHDADAGHLSFVEEVFENQTRL PGGQWIYMSDNYTDVNGEKVLPKDDIECPLGWKWEDEEWSTDLNRAVDEQGWEYSITIPPDRKPKHWVPV EKMYYTHRRRRWVRLRRRDLSQMEALKRHRQAEAEGEGWEYASLFGWKFHLEYRKTDAFRRRRWRRRMEP LEKTGPAAVFALEGALGGMVDDKSEDSMSVSTLSFGVNRPTISCIFDYGNRYHLRCYLYQARDLPAMDKD SFSDPYAIVSFLHQSQKTVVEKNTLNPTWDQTLIFYEIEIFGEPASIAEHPPCIVVELYDHDTYGADEFM GRCICQPSLERMPRLAWFPLTRGSQPAGELLAAFELIQREKPAIHHIPGFEMHETSRILDETEDTDLPYP PPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQMASISSPSLVVECGGQTVQSCVIRNLRKNPNF DVCTLFMEVMLPREDLYCPPIVVKVIDNRQFGRRPVVGQCTIRSLENFLCDPYSAESPSPQGGPDDVSLL SPGEDVLIDIDDKEPLIPVQEEEFIDWWSKFFASVGEREKCGSYLEKDFDTLKVYDTQLENVEAFGGLSD FCNTFKLYRGRTQEETDDPSVIGEFKGLFKIYPLPEDPAIPMPPRQFHQLAAQGPQECLVRIYIVRAFGL QPKDPNGKCDPYIKISIGKKSVSDQDNYIPCTLEPVFGKMFELTCTLPLEKDLKITLYDYDLLSKDEKIG ETVIDLENRLLSKFGARCGLPQTYCVSGPNQWRDQLRPSQLLHLFCQQHRIKAPVYRTDRVTFQDKDYTI EEIEAGRLPNPHLGPVEERLALHVLQQQGLVPEHVESRPLYSPLQPDIEQGKLQMWIDIFPKVLGRPGPP FNITPRKARRFFLRCIIWNTKDVILDDLSLTGEKMSDIYVKGWMVGFEEHKQKTDVHYRSLGGEGNFNWR FVFPFDYLPAEQVCAVAKKDAFWRLDKTESKIPARVVFQIWDNDKFSFDDFLGSLQLDLNRMPKPAKTAE KCSLDQLDDTFHPEWFVSLFEQKTVKGWWPCVTEEGEKKMLAGKLEMTLEIVAESEHEERPAGQGRDEPN MNPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRCAIILFIILFILLLFLGVFVYAFPNYAAMKLVKPFR
|