NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS37567.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37567.1 Public Mus musculus 17 Myo1f 23 108 98 CCDS HistoryNCBI Gene:17916Re-query CCDS DB by CCDS ID:37567.1Re-query CCDS DB by GeneID:17916See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37567.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000087605.12 ENSMUSP00000084887.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000087605.12Link to Ensembl Protein Viewer:ENSMUSP00000084887.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000087605Re-query CCDS DB by Protein ID:ENSMUSP00000084887
Original member Current member NCBI NM_053214.2 NP_444444.2 Accepted alive Link to Nucleotide Sequence:NM_053214.2Link to Protein Sequence:NP_444444.2Re-query CCDS DB by Nucleotide ID:NM_053214Re-query CCDS DB by Protein ID:NP_444444Link to BLAST:NP_444444.2

Chromosomal Locations for CCDS 37567.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 33555854 33555856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33575791 33575928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33576434 33576523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33576613 33576707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33578093 33578180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33578260 33578349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33579867 33579998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33580159 33580293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33581958 33582090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33582240 33582436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33583685 33583765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33583890 33583976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33585593 33585679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33586116 33586283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33588103 33588188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33590828 33590909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33592921 33593027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33594021 33594119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33594223 33594367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33597941 33598055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33598143 33598312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33601051 33601196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33601659 33601805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33601942 33602090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33602526 33602609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33604257 33604452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33604550 33604719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33607299 33607375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3297 nt):
ATGGGCAGCAAGGAGCGCTTTCACTGGCAGAGTCACAACGTGAAGCAGAGTGGAGTGGATGACATGGTGC
TGCTGCCCCAGATCACCGAGGACGCCATTGTGAGCAACCTCCGCAAACGCTTCATGGATGACTACATTTT
TACATACATTGGCTCAGTGCTAATCTCTGTAAACCCCTTCAAGCAGATGCCCTACTTCACTGACCGAGAA
ATTGACCTCTATCAGGGCGCGGCTCAATATGAGAATCCCCCGCACATCTATGCCCTCACCGACAACATGT
ACCGGAATATGCTGATCGACTGTGAGAACCAGTGTGTCATTATCAGTGGGGAGAGCGGAGCTGGGAAGAC
AGTGGCTGCTAAATACATCATGGGCTACATCTCCAAGGTGTCTGGTGGGGGAGACAAGGTCCAGCACGTC
AAAGACATAATCCTACAGTCAAACCCACTGCTTGAGGCTTTCGGCAATGCCAAGACCGTGCGCAACAACA
ATTCCAGCCGCTTTGGCAAGTACTTTGAGATCCAGTTCAGTCGAGGTGGAGAGCCAGATGGAGGCAAGAT
CTCCAACTTCCTGCTGGAAAAGTCTCGTGTGGTCATGCAGAATGAGAATGAGAGGAACTTCCACATCTAC
TACCAGCTTCTGGAAGGGGCCTCCCAGGAGCAGCAGCAGAACCTAGGACTCATGACGCCAGACTACTACT
ACTACCTCAACCAATCAGACACCTACAAGGTGGAAGGCACTGATGACCGAAGTGACTTCAGCGAGACCCT
GAGCGCCATGCAAGTCATCGGGATTCCGACAAGCGTGCAGCAGCTTGTCTTGCAGCTCGTGGCAGGGATC
TTGCACCTGGGGAACATCAGCTTCTGTGAAGAAGGGAATTATGCCCGCGTGGAGAGCGTAGACCTCTTAG
CTTTCCCAGCCTACCTGCTGGGCATAGACAGTGGGCGGCTGCAAGAGAAGCTGACCAGCCGTAAGATGGA
CAGCAAATGGGGTGGACGCAGTGAGTCCATTGATGTGACCCTCAATGTGGAACAGGCAGCCTACACTCGT
GACGCACTGGCCAAGGGACTCTATGCCCGCCTCTTCGACTTCCTGGTGGAGGCCATCAACCGTGCCATGC
AGAAGCCTCAGGAAGAATACAGCATCGGCGTGCTTGACATCTACGGCTTTGAGATCTTCCAGAAAAATGG
CTTTGAGCAGTTCTGCATCAACTTCGTCAATGAAAAGCTGCAGCAGATTTTTATTGAGCTCACGCTGAAG
GCAGAGCAGGAGGAGTATGTGCAAGAGGGCATCCGCTGGACCCCCATCGAATACTTCAACAACAAAATTG
TGTGTGACCTCATCGAAAACAAGCTGAGCCCCCCAGGCATCATGAGCGTGCTAGATGATGTGTGTGCCAC
GATGCATGCTACCGGTGGCGGCGCGGACCAGACACTGCTACAAAAGCTGCAAGCGGCAGTGGGCACCCAC
GAGCACTTCAACAGCTGGAGCGCGGGTTTCGTCATCCATCACTATGCAGGCAAGGTCTCCTATGATGTCA
GTGGCTTCTGTGAGAGGAATCGAGATGTGCTGTTCTCTGATCTTATAGAACTGATGCAGTCCAGTGACCA
GGACTTCCTACGGATGCTCTTTCCTGAGAAGCTGAATATAGACAAGAAGGGCCGCCCCAGTACTGCTGGC
TCCAAGATCAAGAAACAAGCCAACGACCTGGTGTCCACGCTGAAGAAGTGCACACCCCACTACATCCGCT
GCATCAAACCTAACGAGACCAAGCGTCCCCGGGACTGGGAGGAAAGCAGAGTGAAGCACCAGGTGGAGTA
CCTGGGCCTGCGGGAGAACATCCGAGTGCGAAGGGCAGGCTTCGCCTACCGTCGGCAGTTCTCCAAATTC
CTGCAAAGGTATGCCATCCTGACCCCTGAGACATGGCCACGGTGGCGTGGAGATGAACGCCAGGGTGTCC
AGCACCTGCTTCGTGCTGTCAACATGGAGCCAGACCAGTACCAGATGGGGAGTACCAAGGTCTTTGTTAA
GAATCCTGAGTCGCTTTTCCTCCTGGAAGAGATGCGAGAGAGGAAGTTTGACGGCTTCGCTCGCACTATC
CAGAAAGCCTGGCGGCGCCATGTAGCAGTCCGAAAGTATGAAGAGATGCGGGAAGAAGCTTCTAACATCC
TACTGAACAAGAAGGAACGAAGGCGAAACAGCATCAACCGTAACTTCGTTGGGGACTATCTGGGACTGGA
GGAGCGGCCTGAGCTGCGCCAGTTCCTGGCTAAAAGGGAACGAGTGGACTTTGCCGACTCAGTCACCAAG
TATGACCGCCGCTTCAAGCCTATCAAACGGGACTTGATCCTGACCCCAAAGTGTGTGTATGTGATTGGGA
GAGAGAAGGTGAAAAGGGGACCAGAGAAGGGTCTAGTGCGTGAAGTCCTGAAGAAGAAACTGGATATCCA
GGCCCTCCGAGGGGTGTCTCTCAGCACCCGACAGGATGACTTCTTCATCCTTCAAGAAGAGGCTGCGGAC
AGCTTCTTAGAAAGTATCTTCAAGACCGAGTTTGTCAGCCTTCTGTGCAAGCGTTTTGAAGAGGCAGCGC
GCAGGCCCCTTCCCCTCACCTTCAGTGACCTACTACAGTTCCGGGTGAAGAAAGAAGGCTGGGGCGGAGG
TAGTACCCGAAATGTCACCTTCTCTCGCGGGACAAGTGACTTGGCTGTGCTCAAGGCTGGGGGTCGAGCT
CTCACTATCAGCATTGGGGACGGATTGCCTAAGAGCACCAAGCCTACACGGAAGGGGTTAGCCCAGGGTA
GACCTCGAAGGTCAGCGCAGGCTCCCACTCGAGCAGCCCCTGGGCCTCCCAGAGGTTTGAATCGAAATGG
GGTACCACCCTCTTCCCAGGTAAGGTCCCTACCCCTGGAGATCACATCTGGTAGGAGTTCCCAGAGGCCT
CCACGGGGCCCTCCATCCTCAACCCTAGGAGCCAGCAGACGTCCTCGAGCACGGCCACCTTCAGAGCACA
GTACAGAATTCCTTAATGTGCCTGACCAGGGTGTGGCAGGCATGCAAAGGAAGCGAAGTATAGGGCAGAG
ACCTGTGCCAGGAGTGGGCCGGCCTAAGCCCCAACCACGGACACATGGCCCGAGGTGCCGGGCACTGTAC
CAATACATAGGCCAGGATGTGGATGAGCTGAGCTTTAACGTGAACGAAGTCATTGAGATCCTCATAGAAG
ACTCTTCTGGCTGGTGGAAGGGTCGGCTTCATGGCCAGGAAGGTCTCTTTCCAGGAAACTATGTGGAGAA
GATCTGA

Translation (1098 aa):
MGSKERFHWQSHNVKQSGVDDMVLLPQITEDAIVSNLRKRFMDDYIFTYIGSVLISVNPFKQMPYFTDRE
IDLYQGAAQYENPPHIYALTDNMYRNMLIDCENQCVIISGESGAGKTVAAKYIMGYISKVSGGGDKVQHV
KDIILQSNPLLEAFGNAKTVRNNNSSRFGKYFEIQFSRGGEPDGGKISNFLLEKSRVVMQNENERNFHIY
YQLLEGASQEQQQNLGLMTPDYYYYLNQSDTYKVEGTDDRSDFSETLSAMQVIGIPTSVQQLVLQLVAGI
LHLGNISFCEEGNYARVESVDLLAFPAYLLGIDSGRLQEKLTSRKMDSKWGGRSESIDVTLNVEQAAYTR
DALAKGLYARLFDFLVEAINRAMQKPQEEYSIGVLDIYGFEIFQKNGFEQFCINFVNEKLQQIFIELTLK
AEQEEYVQEGIRWTPIEYFNNKIVCDLIENKLSPPGIMSVLDDVCATMHATGGGADQTLLQKLQAAVGTH
EHFNSWSAGFVIHHYAGKVSYDVSGFCERNRDVLFSDLIELMQSSDQDFLRMLFPEKLNIDKKGRPSTAG
SKIKKQANDLVSTLKKCTPHYIRCIKPNETKRPRDWEESRVKHQVEYLGLRENIRVRRAGFAYRRQFSKF
LQRYAILTPETWPRWRGDERQGVQHLLRAVNMEPDQYQMGSTKVFVKNPESLFLLEEMRERKFDGFARTI
QKAWRRHVAVRKYEEMREEASNILLNKKERRRNSINRNFVGDYLGLEERPELRQFLAKRERVDFADSVTK
YDRRFKPIKRDLILTPKCVYVIGREKVKRGPEKGLVREVLKKKLDIQALRGVSLSTRQDDFFILQEEAAD
SFLESIFKTEFVSLLCKRFEEAARRPLPLTFSDLLQFRVKKEGWGGGSTRNVTFSRGTSDLAVLKAGGRA
LTISIGDGLPKSTKPTRKGLAQGRPRRSAQAPTRAAPGPPRGLNRNGVPPSSQVRSLPLEITSGRSSQRP
PRGPPSSTLGASRRPRARPPSEHSTEFLNVPDQGVAGMQRKRSIGQRPVPGVGRPKPQPRTHGPRCRALY
QYIGQDVDELSFNVNEVIEILIEDSSGWWKGRLHGQEGLFPGNYVEKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH