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Report for CCDS32205.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32205.1 Public Homo sapiens 15 TMEM87A 24 110 108 CCDS HistoryNCBI Gene:25963Re-query CCDS DB by CCDS ID:32205.1Re-query CCDS DB by GeneID:25963See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32205.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000389834.9 ENSP00000374484.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000389834.9Link to Ensembl Protein Viewer:ENSP00000374484.4Re-query CCDS DB by Nucleotide ID:ENST00000389834Re-query CCDS DB by Protein ID:ENSP00000374484
Original member Current member NCBI NM_015497.5 NP_056312.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015497.5Link to Protein Sequence:NP_056312.2Re-query CCDS DB by Nucleotide ID:NM_015497Re-query CCDS DB by Protein ID:NP_056312Link to BLAST:NP_056312.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056312.2 555 Q8NBN3-1 555 100% 0 0

Chromosomal Locations for CCDS 32205.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 42211708 42211749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42217803 42217833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42218323 42218378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42219581 42219642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42220062 42220135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42226806 42226909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42227711 42227769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42228712 42228820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42231192 42231260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42233213 42233306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42236320 42236419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42237432 42237615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42239670 42239731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42244050 42244167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42260958 42261002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42261196 42261249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42264090 42264203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42267947 42268032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42272063 42272123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42273255 42273398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1668 nt):
ATGGCGGCGGCTGCGTGGCTTCAGGTGTTGCCTGTCATTCTTCTGCTTCTGGGAGCTCACCCGTCACCAC
TGTCGTTTTTCAGTGCGGGACCGGCAACCGTAGCTGCTGCCGACCGGTCCAAATGGCACATTCCGATACC
GTCGGGGAAAAATTATTTTAGTTTTGGAAAGATCCTCTTCAGAAATACCACTATCTTCCTGAAGTTTGAT
GGAGAACCTTGTGACCTGTCTTTGAATATAACCTGGTATCTGAAAAGCGCTGATTGTTACAATGAAATCT
ATAACTTCAAGGCAGAAGAAGTAGAGTTGTATTTGGAAAAACTTAAGGAAAAAAGAGGCTTGTCTGGGAA
ATATCAAACATCATCAAAATTGTTCCAGAACTGCAGTGAACTCTTTAAAACACAGACCTTTTCTGGAGAT
TTTATGCATCGACTGCCTCTTTTAGGAGAAAAACAGGAGGCTAAGGAGAATGGAACAAACCTTACCTTTA
TTGGAGACAAAACCGCAATGCATGAACCATTGCAAACTTGGCAAGATGCACCATACATTTTTATTGTACA
TATTGGCATTTCATCCTCAAAGGAATCATCAAAAGAAAATTCACTGAGTAATCTTTTTACCATGACTGTT
GAAGTGAAGGGTCCCTATGAATACCTCACACTTGAAGACTATCCCTTGATGATTTTTTTCATGGTGATGT
GTATTGTATATGTCCTGTTTGGTGTTCTGTGGCTGGCATGGTCTGCCTGCTACTGGAGAGATCTCCTGAG
AATTCAGTTTTGGATTGGTGCTGTCATCTTCCTGGGAATGCTTGAGAAAGCTGTCTTCTATGCGGAATTT
CAGAATATCCGATACAAAGGAGAATCTGTCCAGGGTGCTTTGATCCTTGCAGAGCTGCTTTCAGCAGTGA
AACGCTCACTGGCTCGAACCCTGGTCATCATAGTCAGTCTGGGATATGGCATCGTCAAGCCACGCCTTGG
AGTCACTCTTCATAAGGTTGTAGTAGCAGGAGCCCTCTATCTTTTGTTCTCTGGCATGGAAGGGGTCCTC
AGAGTTACTGGGGCCCAGACTGATCTTGCTTCCTTGGCCTTTATCCCCTTGGCTTTCCTAGACACTGCCT
TGTGCTGGTGGATATTTATTAGCCTGACTCAAACAATGAAGCTATTAAAACTTCGGAGGAACATTGTAAA
ACTCTCTTTGTATCGGCATTTCACCAACACGCTTATTTTGGCAGTGGCAGCATCCATTGTGTTTATCATC
TGGACAACCATGAAGTTCAGAATAGTGACATGTCAGTCGGACTGGCGGGAGCTGTGGGTAGACGATGCCA
TCTGGCGCTTGCTGTTCTCCATGATCCTCTTTGTCATCATGGTTCTCTGGCGACCATCTGCAAACAACCA
GAGGTTTGCCTTTTCACCATTGTCTGAGGAAGAGGAGGAGGATGAACAAAAGGAGCCTATGCTGAAAGAA
AGCTTTGAAGGAATGAAAATGAGAAGTACCAAACAAGAACCCAATGGAAATAGTAAAGTTAACAAAGCAC
AGGAAGATGATTTGAAGTGGGTAGAAGAGAATGTTCCTTCTTCTGTGACAGATGTAGCACTTCCAGCCCT
TCTGGATTCAGATGAGGAACGAATGATCACACACTTTGAAAGGTCCAAAATGGAGTAA

Translation (555 aa):
MAAAAWLQVLPVILLLLGAHPSPLSFFSAGPATVAAADRSKWHIPIPSGKNYFSFGKILFRNTTIFLKFD
GEPCDLSLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQNCSELFKTQTFSGD
FMHRLPLLGEKQEAKENGTNLTFIGDKTAMHEPLQTWQDAPYIFIVHIGISSSKESSKENSLSNLFTMTV
EVKGPYEYLTLEDYPLMIFFMVMCIVYVLFGVLWLAWSACYWRDLLRIQFWIGAVIFLGMLEKAVFYAEF
QNIRYKGESVQGALILAELLSAVKRSLARTLVIIVSLGYGIVKPRLGVTLHKVVVAGALYLLFSGMEGVL
RVTGAQTDLASLAFIPLAFLDTALCWWIFISLTQTMKLLKLRRNIVKLSLYRHFTNTLILAVAASIVFII
WTTMKFRIVTCQSDWRELWVDDAIWRLLFSMILFVIMVLWRPSANNQRFAFSPLSEEEEEDEQKEPMLKE
SFEGMKMRSTKQEPNGNSKVNKAQEDDLKWVEENVPSSVTDVALPALLDSDEERMITHFERSKME


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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