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Report for CCDS32060.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32060.1 Public Homo sapiens 14 NOVA1 24 110 108 CCDS HistoryNCBI Gene:4857Re-query CCDS DB by CCDS ID:32060.1Re-query CCDS DB by GeneID:4857See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32060.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000465357.6 ENSP00000447391.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000465357.6Link to Ensembl Protein Viewer:ENSP00000447391.1Re-query CCDS DB by Nucleotide ID:ENST00000465357Re-query CCDS DB by Protein ID:ENSP00000447391
Original member Current member NCBI NM_006489.3 NP_006480.2 Accepted alive Link to Nucleotide Sequence:NM_006489.3Link to Protein Sequence:NP_006480.2Re-query CCDS DB by Nucleotide ID:NM_006489Re-query CCDS DB by Protein ID:NP_006480Link to BLAST:NP_006480.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006480.2 483 P51513-5 483 100% 0 0

Chromosomal Locations for CCDS 32060.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 26447959 26448963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26479977 26480143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26595410 26595553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26597301 26597436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1452 nt):
ATGATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCACACTGGGGTTCCCATAGACCTGGACCCGCCGG
ACTCGCGGAAAAGGCCGCTGGAAGCCCCCCCTGAAGCCGGCAGCACCAAGAGGACCAATACGGGCGAAGA
CGGCCAGTATTTTCTAAAGGTTCTCATACCTAGTTATGCTGCTGGATCTATAATTGGGAAGGGAGGACAG
ACAATTGTTCAGTTGCAAAAAGAAACTGGAGCCACCATCAAGCTGTCTAAGTCCAAAGATTTTTACCCAG
GTACTACTGAGCGAGTGTGCTTGATCCAGGGAACGGTTGAAGCACTGAATGCAGTTCATGGATTCATTGC
AGAAAAAATTCGAGAAATGCCCCAAAATGTGGCCAAGACAGAACCAGTCAGCATTCTACAACCCCAGACC
ACCGTTAATCCAGATCGCATCAAACAAGTAAAGATTATAGTTCCCAACAGCACAGCAGGTCTGATAATAG
GGAAGGGAGGTGCTACTGTGAAGGCTGTAATGGAGCAGTCAGGGGCTTGGGTGCAGCTTTCCCAGAAACC
TGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCTGTT
GAACTTATCATCCAGAAGATACAAGAGGATCCACAAAGTGGCAGCTGTCTCAATATCAGTTATGCCAATG
TGACAGGTCCAGTGGCAAATTCCAATCCAACCGGATCTCCTTATGCAAACACTGCTGAAGTGTTACCAAC
TGCTGCAGCAGCTGCAGGGCTATTAGGACATGCTAACCTTGCTGGCGTTGCAGCCTTTCCAGCAGTTTTA
TCTGGCTTCACAGGCAATGACCTGGTGGCCATCACCTCTGCACTTAATACATTAGCCAGCTATGGATATA
ATCTCAACACTTTAGGTTTAGGTCTCAGTCAAGCAGCAGCAACAGGGGCTTTGGCTGCAGCAGCTGCCAG
TGCCAACCCAGCAGCAGCAGCAGCCAATTTATTGGCCACCTATGCCAGTGAAGCCTCAGCCAGTGGCAGC
ACAGCTGGTGGTACGGCGGGGACATTTGCATTAGGTAGCCTGGCTGCTGCTACTGCTGCAACCAATGGAT
ATTTTGGAGCTGCTTCTCCCCTAGCTGCCAGTGCCATTCTAGGAACAGAAAAGTCCACAGATGGATCCAA
GGATGTAGTTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGGCAAAGGAGGGAAAACATTA
GTGGAATACCAGGAGTTGACTGGTGCAAGGATACAGATCTCCAAAAAAGGAGAATTCGTACCTGGCACAA
GGAATCGGAAGGTAACCATTACTGGAACACCAGCTGCAACACAGGCTGCTCAATATTTAATTACACAAAG
GATCACATATGAGCAAGGAGTTCGGGCTGCCAATCCTCAGAAAGTGGGTTGA

Translation (483 aa):
MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQ
TIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQT
TVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAV
ELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLPTAAAAAGLLGHANLAGVAAFPAVL
SGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEASASGS
TAGGTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTL
VEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQGVRAANPQKVG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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