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Report for CCDS31683.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31683.1 Public Homo sapiens 11 CEP164 24 110 108 CCDS HistoryNCBI Gene:22897Re-query CCDS DB by CCDS ID:31683.1Re-query CCDS DB by GeneID:22897See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31683.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000278935.8 ENSP00000278935.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000278935.8Link to Ensembl Protein Viewer:ENSP00000278935.3Re-query CCDS DB by Nucleotide ID:ENST00000278935Re-query CCDS DB by Protein ID:ENSP00000278935
Original member Current member NCBI NM_014956.5 NP_055771.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014956.5Link to Protein Sequence:NP_055771.4Re-query CCDS DB by Nucleotide ID:NM_014956Re-query CCDS DB by Protein ID:NP_055771Link to BLAST:NP_055771.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055771.4 1460 Q9UPV0-1 1460 100% 0 0

Chromosomal Locations for CCDS 31683.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 117338587 117338668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117344166 117344277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117351790 117351988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117361835 117361993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117362404 117362538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117363429 117363506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117371080 117371466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117373751 117373831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117375708 117375791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117380614 117380705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117381701 117381868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117382796 117382942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117387203 117387412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117390777 117390908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117390999 117391215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117392226 117392303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117392496 117392627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117393004 117393126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117394350 117394493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117394920 117395003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117395123 117395191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117395547 117395722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117396054 117396180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117396550 117396611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117397091 117397313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117407925 117408032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117408890 117409028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117409618 117409965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117410828 117410894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117411795 117411917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 117412072 117412168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4383 nt):
ATGGCTGGACGACCCCTCCGCATAGGAGATCAGCTGGTTCTGGAAGAAGATTATGATGAGACCTACATTC
CTAGTGAGCAAGAAATTCTTGAATTTGCCCGGGAGATTGGTATTGATCCCATCAAGGAACCAGAACTGAT
GTGGCTGGCGCGAGAGGGCATCGTGGCCCCACTGCCTGGAGAGTGGAAACCATGCCAGGACATCACAGGT
GACATTTACTATTTCAACTTCGCCAACGGGCAGTCTATGTGGGACCATCCATGTGACGAACACTATCGGA
GCTTGGTGATCCAAGAGCGGGCAAAGCTGTCAACTTCTGGGGCCATTAAGAAGAAGAAAAAAAAAAAGGA
AAAGAAAGACAAGAAGGACAGAGACCCCCCCAAAAGTTCGCTGGCCTTGGGTTCCTCATTAGCCCCAGTT
CATGTTCCTCTTGGGGGCCTGGCTCCTTTACGAGGTCTTGTGGATACCCCACCCTCTGCTCTTCGTGGAT
CTCAAAGCGTGAGCCTGGGGAGCTCAGTGGAGTCTGGACGTCAGCTTGGAGAACTCATGCTGCCTTCACA
GGGTCTCAAGACCTCTGCTTATACAAAGGGTCTCTTGGGCTCCATATATGAGGACAAGACTGCTCTCAGC
CTCTTGGGTTTAGGAGAAGAAACCAATGAGGAGGATGAGGAGGAAAGTGACAACCAGAGTGTCCACAGCT
CAAGTGAGCCTCTTAGGAACCTACACCTGGACATTGGGGCACTGGGGGGTGACTTTGAGTATGAGGAGTC
TCTGAGAACAAGCCAGCCAGAGGAGAAGAAGGATGTTTCTCTGGATTCAGATGCTGCCGGTCCCCCTACT
CCCTGCAAGCCCTCCAGCCCAGGTGCAGACAGCAGTCTGAGCAGTGCTGTTGGCAAAGGGCGACAGGGAA
GTGGAGCAAGACCTGGTCTTCCAGAAAAAGAGGAAAATGAGAAGAGTGAACCTAAGATTTGCAGGAATCT
GGTGACCCCCAAGGCAGACCCTACAGGCAGTGAGCCTGCCAAAGCCTCTGAAAAGGAAGCACCAGAGGAC
ACAGTAGATGCAGGAGAGGAGGGTTCCAGGAGGGAAGAGGCAGCCAAGGAGCCAAAGAAGAAGGCTTCTG
CTCTGGAAGAGGGCAGTTCAGACGCCAGCCAAGAACTGGAAATTAGTGAACACATGAAGGAACCACAGCT
CTCAGACTCCATAGCTTCTGACCCCAAGTCCTTCCATGGCCTGGACTTCGGTTTTCGCAGCCGGATCTCG
GAGCACCTGCTGGATGTTGATGTGCTTTCCCCAGTCCTGGGTGGAGCTTGTCGGCAGGCCCAGCAACCAC
TGGGAATAGAAGACAAGGATGACAGCCAGTCCAGCCAAGATGAGCTGCAGAGCAAGCAGTCCAAAGGCCT
GGAGGAGAGGTTATCTCCTCCACTTCCACACGAGGAGCGGGCCCAGAGTCCCCCTCGCAGCCTGGCCACT
GAAGAAGAGCCTCCCCAGGGCCCCGAGGGGCAGCCCGAGTGGAAGGAGGCAGAGGAGCTTGGGGAGGACT
CTGCAGCCAGCCTCAGCCTGCAGCTGTCCCTCCAGAGGGAGCAGGCCCCAAGCCCACCTGCTGCCTGTGA
GAAGGGCAAGGAGCAGCATTCCCAGGCCGAGGAGCTGGGCCCTGGGCAGGAAGAGGCAGAGGATCCTGAG
GAGAAGGTGGCGGTCAGCCCCACCCCGCCAGTCTCTCCAGAGGTGCGATCCACAGAGCCTGTGGCTCCCC
CAGAGCAGCTCTCAGAGGCTGCACTAAAGGCCATGGAAGAGGCAGTGGCCCAAGTACTCGAGCAAGACCA
GAGGCACCTGCTGGAATCCAAGCAAGAGAAGATGCAGCAACTGCGGGAGAAGCTGTGCCAAGAGGAGGAA
GAGGAGATCCTCCGGCTTCACCAGCAGAAAGAGCAATCTCTCAGTTCCTTGAGGGAGCGGCTGCAGAAAG
CCATTGAGGAGGAGGAGGCCCGGATGAGAGAGGAGGAAAGCCAGAGGCTATCCTGGCTCCGAGCTCAGGT
CCAGTCCAGCACACAAGCAGATGAGGACCAAATCAGGGCTGAGCAAGAGGCTTCCCTGCAGAAACTGAGA
GAAGAGTTGGAGTCTCAACAGAAGGCTGAGAGGGCCAGCTTGGAACAGAAAAATAGGCAAATGCTGGAGC
AGCTCAAGGAAGAGATAGAGGCTTCGGAGAAGAGCGAGCAGGCTGCCCTGAATGCTGCAAAGGAGAAGGC
TCTGCAGCAGCTGAGGGAGCAGCTGGAAGGGGAGAGGAAAGAAGCTGTGGCAACGCTGGAGAAGGAGCAC
AGTGCTGAGCTGGAGCGGCTCTGCTCCTCATTGGAGGCCAAGCACCGGGAGGTGGTCTCCAGCCTCCAGA
AGAAGATACAGGAAGCTCAACAGAAAGAGGAGGCCCAGCTGCAGAAGTGCCTTGGGCAAGTGGAGCACAG
AGTTCACCAGAAGTCTTATCACGTGGCTGGGTATGAGCACGAGCTCAGCAGTCTCCTGCGAGAGAAGCGC
CAGGAAGTGGAAGGGGAGCATGAGAGGAGGTTGGACAAGATGAAGGAGGAGCACCAGCAAGTGATGGCTA
AGGCCAGAGAGCAGTATGAAGCTGAGGAGAGGAAGCAGCGGGCTGAGCTTCTGGGGCACCTGACCGGAGA
GCTGGAGCGCCTGCAGAGGGCCCATGAACGAGAACTGGAGACTGTGAGGCAGGAGCAACACAAGCGTCTT
GAGGACTTGCGGCGCCGGCACAGGGAGCAGGAAAGGAAGCTCCAGGATTTAGAGTTGGACCTTGAAACCA
GAGCTAAAGATGTCAAGGCCAGATTGGCTCTGCTGGAGGTCCAGGAGGAGACCGCCCGGAGGGAGAAGCA
GCAGCTGCTTGATGTGCAGAGGCAGGTTGCTCTGAAGAGTGAGGAAGCCACAGCCACCCATCAGCAGCTG
GAGGAGGCACAGAAGGAGCACACCCACCTGTTGCAGTCAAACCAGCAGCTCCGAGAAATTCTTGATGAGC
TGCAGGCCCGCAAGCTGAAGCTGGAGTCCCAAGTGGATCTGCTGCAGGCTCAGAGCCAGCAACTGCAGAA
ACACTTCAGCAGCCTGGAGGCTGAAGCTCAAAAGAAGCAGCACCTGTTGAGAGAAGTGACAGTTGAGGAA
AATAATGCTTCCCCACATTTTGAGCCAGATCTCCATATTGAGGACCTGAGGAAATCCCTTGGAACAAACC
AGACCAAAGAGGTGTCTTCTTCTCTCTCCCAGAGCAAGGAGGACTTATACTTGGACAGCCTGTCCTCCCA
CAATGTCTGGCACCTCCTCTCTGCTGAGGGGGTAGCCCTCCGTAGTGCCAAGGAGTTCCTTGTGCAGCAG
ACACGCTCCATGCGGAGGCGGCAGACAGCTCTGAAAGCTGCCCAGCAGCATTGGCGCCATGAGCTGGCCA
GTGCGCAGGAGGTGGCCAAAGACCCACCAGGCATCAAGGCCCTGGAAGATATGCGCAAGAACCTGGAGAA
GGAGACCAGGCACCTGGATGAGATGAAGTCGGCCATGCGGAAAGGCCACAACCTGCTGAAGAAGAAAGAG
GAGAAGCTGAATCAGTTGGAGTCCTCTCTTTGGGAAGAGGCCTCAGATGAGGGCACTCTGGGAGGATCCC
CCACCAAGAAGGCAGTAACCTTCGACCTCAGTGACATGGACAGCCTGAGCAGTGAAAGTTCTGAATCTTT
TTCCCCGCCTCACCGTGAGTGGTGGCGGCAGCAGAGGATCGACTCAACCCCGAGTCTCACCTCCCGCAAG
ATCCACGGGCTTAGCCACTCCCTCCGGCAGATCAGCAGCCAGCTGAGCAGTGTCCTCAGCATCCTGGACA
GCCTCAACCCTCAGTCGCCGCCGCCGCTCCTCGCCTCCATGCCAGCCCAGCTCCCTCCCCGGGACCCTAA
GAGCACCCCCACCCCCACCTACTATGGCTCCCTGGCCAGGTTCTCAGCCTTATCATCTGCTACACCCACG
TCCACCCAATGGGCCTGGGATTCAGGGCAGGGGCCCAGGCTCCCCTCCTCTGTGGCTCAAACGGTGGACG
ACTTCCTGTTGGAGAAGTGGCGCAAGTATTTTCCATCTGGCATCCCGCTGCTCAGCAACAGCCCCACCCC
GCTGGAGAGCAGGCTGGGTTACATGTCTGCCAGTGAGCAGCTCCGGCTCCTACAGCACTCCCATTCGCAA
GTCCCTGAGGCGGGCAGCACCACCTTTCAGGGCATAATTGAGGCCAACCGGAGGTGGCTGGAACGTGTCA
AGAATGACCCCAGGTTACCTCTCTTCTCGTCAACACCCAAGCCAAAAGCTACTTTGAGCCTCCTGCAGCT
GGGCCTTGATGAGCACAACAGAGTGAAGGTGTATCGCTTCTGA

Translation (1460 aa):
MAGRPLRIGDQLVLEEDYDETYIPSEQEILEFAREIGIDPIKEPELMWLAREGIVAPLPGEWKPCQDITG
DIYYFNFANGQSMWDHPCDEHYRSLVIQERAKLSTSGAIKKKKKKKEKKDKKDRDPPKSSLALGSSLAPV
HVPLGGLAPLRGLVDTPPSALRGSQSVSLGSSVESGRQLGELMLPSQGLKTSAYTKGLLGSIYEDKTALS
LLGLGEETNEEDEEESDNQSVHSSSEPLRNLHLDIGALGGDFEYEESLRTSQPEEKKDVSLDSDAAGPPT
PCKPSSPGADSSLSSAVGKGRQGSGARPGLPEKEENEKSEPKICRNLVTPKADPTGSEPAKASEKEAPED
TVDAGEEGSRREEAAKEPKKKASALEEGSSDASQELEISEHMKEPQLSDSIASDPKSFHGLDFGFRSRIS
EHLLDVDVLSPVLGGACRQAQQPLGIEDKDDSQSSQDELQSKQSKGLEERLSPPLPHEERAQSPPRSLAT
EEEPPQGPEGQPEWKEAEELGEDSAASLSLQLSLQREQAPSPPAACEKGKEQHSQAEELGPGQEEAEDPE
EKVAVSPTPPVSPEVRSTEPVAPPEQLSEAALKAMEEAVAQVLEQDQRHLLESKQEKMQQLREKLCQEEE
EEILRLHQQKEQSLSSLRERLQKAIEEEEARMREEESQRLSWLRAQVQSSTQADEDQIRAEQEASLQKLR
EELESQQKAERASLEQKNRQMLEQLKEEIEASEKSEQAALNAAKEKALQQLREQLEGERKEAVATLEKEH
SAELERLCSSLEAKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLLREKR
QEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERELETVRQEQHKRL
EDLRRRHREQERKLQDLELDLETRAKDVKARLALLEVQEETARREKQQLLDVQRQVALKSEEATATHQQL
EEAQKEHTHLLQSNQQLREILDELQARKLKLESQVDLLQAQSQQLQKHFSSLEAEAQKKQHLLREVTVEE
NNASPHFEPDLHIEDLRKSLGTNQTKEVSSSLSQSKEDLYLDSLSSHNVWHLLSAEGVALRSAKEFLVQQ
TRSMRRRQTALKAAQQHWRHELASAQEVAKDPPGIKALEDMRKNLEKETRHLDEMKSAMRKGHNLLKKKE
EKLNQLESSLWEEASDEGTLGGSPTKKAVTFDLSDMDSLSSESSESFSPPHREWWRQQRIDSTPSLTSRK
IHGLSHSLRQISSQLSSVLSILDSLNPQSPPPLLASMPAQLPPRDPKSTPTPTYYGSLARFSALSSATPT
STQWAWDSGQGPRLPSSVAQTVDDFLLEKWRKYFPSGIPLLSNSPTPLESRLGYMSASEQLRLLQHSHSQ
VPEAGSTTFQGIIEANRRWLERVKNDPRLPLFSSTPKPKATLSLLQLGLDEHNRVKVYRF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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