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Report for CCDS31514.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31514.2 Public Homo sapiens 11 OR10AG1 24 110 108 CCDS HistoryNCBI Gene:282770Re-query CCDS DB by CCDS ID:31514.2Re-query CCDS DB by GeneID:282770See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 31514.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641071.2 ENSP00000493281.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641071.2Link to Ensembl Protein Viewer:ENSP00000493281.2Re-query CCDS DB by Nucleotide ID:ENST00000641071Re-query CCDS DB by Protein ID:ENSP00000493281
Original member Current member NCBI NM_001005491.2 NP_001005491.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005491.2Link to Protein Sequence:NP_001005491.2Re-query CCDS DB by Nucleotide ID:NM_001005491Re-query CCDS DB by Protein ID:NP_001005491Link to BLAST:NP_001005491.2

Chromosomal Locations for CCDS 31514.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 55967558 55968507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 55969892 55969907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGCAAATCCCTAAAGATGGAGAGCAAACTAAAAGAGAAAAATCAAATGTGACTACAATAATGGAATTTG
TTCTTTTGGGGTTTTCTGATATTCCCAATCTCCACTGGATGCTTTTTAGTATATTTTTACTTATGTATTT
GATGATCCTGATGTGCAATGGCATCATAATACTACTAATAAAAATTCACCCCGCTCTCCAGACTCCCATG
TATTTTTTTCTTAGCAATTTTTCCCTTTTGGAAATCTGTTATGTAACAATCATTATCCCAAGAATGCTCA
TGGACATTTGGACTCAGAAAGGAAATATTTCTTTGTTTGCTTGTGCTACACAAATGTGTTTTTTTCTTAT
GCTTGGAGGCACGGAGTGTCTCCTTCTGACAGTGATGGCCTATGACCGCTACGTGGCTATTTGTAAGCCT
TTGCAGTATCCTCTAGTGATGAACCACAAAGTCTGCATTCAGCTGATAATAGCTTCCTGGACCATCACAA
TTCCTGTAGTAATTGGGGAAACATGCCAAATTTTCCTTTTGCCCTTTTGCGGAACTAACACAATTAATCA
TTTCTTTTGTGACATCCCGCCAATACTCAAGCTTGCTTGTGGAAACATATTTGTGAATGAGATAACAGTC
CATGTAGTAGCGGTGGTGTTTATCACGGTGCCATTTCTGTTGATTGTTGTCTCTTATGGCAAAATTATCT
CCAACATTTTGAAATTGTCATCAGCCAGAGGAAAGGCTAAAGCCTTCTCCACCTGCTCATCTCACCTAAT
AGTTGTAATCTTATTCTTTGGAGCAGGTACTATCACTTATTTACAGCCCAAACCACATCAGTTTCAAAGG
ATGGGGAAACTGATTTCTCTTTTCTACACCATTCTGATTCCAACTTTGAATCCTATTATATATACCCTGA
GGAACAAAGATATCATGGTGGCATTGAGAAAATTACTAGCTAAGTTATTAACATGA

Translation (321 aa):
MQIPKDGEQTKREKSNVTTIMEFVLLGFSDIPNLHWMLFSIFLLMYLMILMCNGIIILLIKIHPALQTPM
YFFLSNFSLLEICYVTIIIPRMLMDIWTQKGNISLFACATQMCFFLMLGGTECLLLTVMAYDRYVAICKP
LQYPLVMNHKVCIQLIIASWTITIPVVIGETCQIFLLPFCGTNTINHFFCDIPPILKLACGNIFVNEITV
HVVAVVFITVPFLLIVVSYGKIISNILKLSSARGKAKAFSTCSSHLIVVILFFGAGTITYLQPKPHQFQR
MGKLISLFYTILIPTLNPIIYTLRNKDIMVALRKLLAKLLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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