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Report for CCDS31087.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31087.1 Public Homo sapiens 1 ZNF670 24 110 108 CCDS HistoryNCBI Gene:93474Re-query CCDS DB by CCDS ID:31087.1Re-query CCDS DB by GeneID:93474See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31087.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366503.3 ENSP00000355459.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366503.3Link to Ensembl Protein Viewer:ENSP00000355459.2Re-query CCDS DB by Nucleotide ID:ENST00000366503Re-query CCDS DB by Protein ID:ENSP00000355459
Original member Current member NCBI NM_033213.5 NP_149990.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033213.5Link to Protein Sequence:NP_149990.1Re-query CCDS DB by Nucleotide ID:NM_033213Re-query CCDS DB by Protein ID:NP_149990Link to BLAST:NP_149990.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149990.1 389 Q9BS34 389 100% 0 0

Chromosomal Locations for CCDS 31087.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 247037449 247038427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247038810 247038870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247039411 247039537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247078594 247078596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1170 nt):
ATGGATTCAGTGTCATTTGAAGATGTGGCTGTGGCCTTTACTCAGGAGGAGTGGGCTTTGCTGGATCCTT
CT
CAAAAGAATCTCTACAGAGATGTGATGCAAGAAATCTTCAGGAACCTGGCTTCTGTAGGAAACAAATC
A
GAAGACCAGAATATCCAAGATGACTTCAAAAATCCTGGGAGAAATCTAAGCAGTCATGTGGTAGAGAGA
CTG
TTTGAAATTAAAGAAGGCAGTCAATATGGAGAAACCTTCAGCCAGGATTCAAATTTGAATCTGAATA
AG
AAAGTTTCTACTGGAGTAAAGCCATGTGAATGCAGTGTGTGTGGAAAAGTCTTCATATGTCATTCAGC
C
CTTCATAGGCACATCCTGTCTCACATTGGAAACAAACTATTTGAGTGTGAGGAATGTCCAGAGAAGTTA
TAT
CATTGCAAACAATGTGGGAAAGCCTTTATCTCTCTCACCAGTGTTGACAGACACATGGTAACACACA
CT
AGTAATGGGCCTTATAAGGGTCCAGTGTATGAGAAGCCTTTTGATTTTCCTAGTGTATTTCAAATGCC
T
CAGAGCACTTACACTGGAGAGAAAACATATAAATGTAAACATTGTGATAAAGCCTTCAATTATTCAAGT
TAT
CTTCGTGAACATGAAAGAACTCATACTGGAGAGAAACCCTATGCATGTAAGAAATGTGGTAAATCAT
TC
ACTTTTTCCAGTTCTCTTCGCCAACATGAAAGATCTCATACTGGAGAGAAACCCTATGAATGTAAGGA
A
TGTGGCAAAGCCTTCAGTCGTTCCACTTACTTGGGAATACATGAAAGAACGCATACTGGAGAAAAACCC
TAT
GAATGTATAAAATGTGGCAAAGCCTTTAGATGTTCCAGAGTCCTCAGAGTCCATGAAAGGACTCACA
GT
GGAGAAAAGCCCTATGAATGTAAACAATGTGGTAAAGCCTTCAAATATTCTAGTAACCTATGTGAGCA
T
GAAAGAACTCACACTGGAGTGAAACCTTATGGATGTAAGGAATGTGGTAAGTCGTTTACTTCTTCCAGT
GCC
CTTCGAAGCCATGAAAGGACTCATACTGGAGAAAAACCCTATGAATGTAAGAAATGTGGTAAAGCCT
TC
AGTTGTTCCAGTTCCCTTCGAAAGCATGAAAGAGCTTATATGTGGTAA


Translation (389 aa):
MDSVSFEDVAVAFTQEEWALLDPSQKNLYRDVMQEIFRNLASVGNKSEDQNIQDDFKNPGRNLSSHVVER
L
FEIKEGSQYGETFSQDSNLNLNKKVSTGVKPCECSVCGKVFICHSALHRHILSHIGNKLFECEECPEKL
Y
HCKQCGKAFISLTSVDRHMVTHTSNGPYKGPVYEKPFDFPSVFQMPQSTYTGEKTYKCKHCDKAFNYSS
Y
LREHERTHTGEKPYACKKCGKSFTFSSSLRQHERSHTGEKPYECKECGKAFSRSTYLGIHERTHTGEKP
Y
ECIKCGKAFRCSRVLRVHERTHSGEKPYECKQCGKAFKYSSNLCEHERTHTGVKPYGCKECGKSFTSSS
A
LRSHERTHTGEKPYECKKCGKAFSCSSSLRKHERAYMW




Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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